RNA–Protein interactions for RNA: ENST00000564315.1

COG4-210, Transcript of component of oligomeric golgi complex 4, humanhuman

TSL 2

Gene COG4, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-210ENST00000564315 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
COG4-210ENST00000564315 ABCC9O60706 1549 aa18.69■□□□□ 0.58
COG4-210ENST00000564315 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
COG4-210ENST00000564315 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
COG4-210ENST00000564315 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
COG4-210ENST00000564315 DNAJC5Q9H3Z4 198 aa17.33■□□□□ 0.36
COG4-210ENST00000564315 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
COG4-210ENST00000564315 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
COG4-210ENST00000564315 NACADO15069 1562 aa17.14■□□□□ 0.33
COG4-210ENST00000564315 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.32
COG4-210ENST00000564315 DCAF8L2P0C7V8 631 aa16.99■□□□□ 0.31
COG4-210ENST00000564315 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
COG4-210ENST00000564315 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
COG4-210ENST00000564315 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
COG4-210ENST00000564315 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
COG4-210ENST00000564315 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
COG4-210ENST00000564315 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
COG4-210ENST00000564315 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
COG4-210ENST00000564315 EIF4G1Q04637 1599 aaKnown RBP16.61■□□□□ 0.25
COG4-210ENST00000564315 CUX2O14529 1486 aa16.42■□□□□ 0.22
COG4-210ENST00000564315 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
COG4-210ENST00000564315 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
COG4-210ENST00000564315 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
COG4-210ENST00000564315 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
COG4-210ENST00000564315 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
COG4-210ENST00000564315 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
COG4-210ENST00000564315 NESP48681 1621 aa15.84■□□□□ 0.13
COG4-210ENST00000564315 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
COG4-210ENST00000564315 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
COG4-210ENST00000564315 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
COG4-210ENST00000564315 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
COG4-210ENST00000564315 HMGXB3Q12766 1538 aa15.76■□□□□ 0.11
COG4-210ENST00000564315 WIZO95785 1651 aa15.71■□□□□ 0.11
COG4-210ENST00000564315 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
COG4-210ENST00000564315 RSF1Q96T23 1441 aaPredicted RBP15.63■□□□□ 0.09
COG4-210ENST00000564315 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.09
COG4-210ENST00000564315 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
COG4-210ENST00000564315 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
COG4-210ENST00000564315 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
COG4-210ENST00000564315 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
COG4-210ENST00000564315 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
COG4-210ENST00000564315 WDR62O43379 1518 aa15.44■□□□□ 0.06
COG4-210ENST00000564315 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
COG4-210ENST00000564315 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
COG4-210ENST00000564315 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
COG4-210ENST00000564315 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
COG4-210ENST00000564315 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
COG4-210ENST00000564315 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
COG4-210ENST00000564315 ARHGEF11O15085 1522 aa15.3■□□□□ 0.04
COG4-210ENST00000564315 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
COG4-210ENST00000564315 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
COG4-210ENST00000564315 CYB5RLQ6IPT4 315 aa15.27■□□□□ 0.04
COG4-210ENST00000564315 CFTRP13569 1480 aa15.25■□□□□ 0.03
COG4-210ENST00000564315 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
COG4-210ENST00000564315 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
COG4-210ENST00000564315 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
COG4-210ENST00000564315 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
COG4-210ENST00000564315 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
COG4-210ENST00000564315 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
COG4-210ENST00000564315 IFT140Q96RY7 1462 aa14.97□□□□□ -0.01
COG4-210ENST00000564315 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
COG4-210ENST00000564315 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
COG4-210ENST00000564315 ILDR1Q86SU0 546 aaPredicted RBP14.93□□□□□ -0.02
COG4-210ENST00000564315 CUX1P39880 1505 aa14.87□□□□□ -0.03
COG4-210ENST00000564315 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
COG4-210ENST00000564315 FBLN2P98095 1184 aa14.86□□□□□ -0.03
COG4-210ENST00000564315 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
COG4-210ENST00000564315 CHD1O14646 1710 aa14.84□□□□□ -0.03
COG4-210ENST00000564315 TARBP1Q13395 1621 aaKnown RBP14.83□□□□□ -0.04
COG4-210ENST00000564315 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
COG4-210ENST00000564315 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.041e-8■■■■■ 34.1
COG4-210ENST00000564315 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
COG4-210ENST00000564315 SYNJ1O43426 1573 aa14.79□□□□□ -0.04
COG4-210ENST00000564315 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
COG4-210ENST00000564315 WDR97A6NE52 1622 aa14.77□□□□□ -0.04
COG4-210ENST00000564315 TOP2BQ02880 1626 aa14.75□□□□□ -0.05
COG4-210ENST00000564315 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
COG4-210ENST00000564315 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
COG4-210ENST00000564315 WRNQ14191 1432 aaPredicted RBP eCLIP14.73□□□□□ -0.05
COG4-210ENST00000564315 SOGA1O94964 1423 aa14.69□□□□□ -0.06
COG4-210ENST00000564315 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
COG4-210ENST00000564315 ABCA5Q8WWZ7 1642 aa14.65□□□□□ -0.06
COG4-210ENST00000564315 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
COG4-210ENST00000564315 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
COG4-210ENST00000564315 CHMP7Q8WUX9 453 aaPredicted RBP14.63□□□□□ -0.07
COG4-210ENST00000564315 TDRD9Q8NDG6 1382 aaKnown RBP14.62□□□□□ -0.07
COG4-210ENST00000564315 SNAPC4Q5SXM2 1469 aa14.61□□□□□ -0.07
COG4-210ENST00000564315 KDM4FA0A1W2PPD8 638 aa14.6□□□□□ -0.07
COG4-210ENST00000564315 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
COG4-210ENST00000564315 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
COG4-210ENST00000564315 SYNJ2O15056 1496 aa14.51□□□□□ -0.09
COG4-210ENST00000564315 ADAMTS12P58397 1594 aa14.51□□□□□ -0.09
COG4-210ENST00000564315 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.09
COG4-210ENST00000564315 ERCC6L2Q5T890 1561 aa14.45□□□□□ -0.1
COG4-210ENST00000564315 KIF13AQ9H1H9 1805 aa14.45□□□□□ -0.1
COG4-210ENST00000564315 GRIN2AQ12879 1464 aa14.39□□□□□ -0.11
COG4-210ENST00000564315 FAM69CQ0P6D2 419 aa14.39□□□□□ -0.11
COG4-210ENST00000564315 KIF27Q86VH2 1401 aa14.39□□□□□ -0.11
COG4-210ENST00000564315 CUL7Q14999 1698 aa14.38□□□□□ -0.11
COG4-210ENST00000564315 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms