RNA–Protein interactions for RNA: ENST00000564189.1

ZNF646-204, Transcript of zinc finger protein 646, humanhuman

TSL 2

Gene ZNF646, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF646-204ENST00000564189 NISCHQ9Y2I1 1504 aa43.68■■■■■ 4.58
ZNF646-204ENST00000564189 CCDC180Q9P1Z9 1646 aa39.04■■■■□ 3.84
ZNF646-204ENST00000564189 ABCC9O60706 1549 aa38.7■■■■□ 3.79
ZNF646-204ENST00000564189 RB1CC1Q8TDY2 1594 aa36.97■■■■□ 3.51
ZNF646-204ENST00000564189 NACADO15069 1562 aa36.83■■■■□ 3.49
ZNF646-204ENST00000564189 DCAF8L2P0C7V8 631 aa36.63■■■■□ 3.45
ZNF646-204ENST00000564189 MYO15BQ96JP2 1530 aa36.46■■■■□ 3.43
ZNF646-204ENST00000564189 ZCCHC6Q5VYS8 1495 aaKnown RBP36.27■■■■□ 3.4
ZNF646-204ENST00000564189 UNC13AQ9UPW8 1703 aa36.23■■■■□ 3.39
ZNF646-204ENST00000564189 DNAJC5BQ9UF47 199 aa36.11■■■■□ 3.37
ZNF646-204ENST00000564189 DCAF1Q9Y4B6 1507 aa36.11■■■■□ 3.37
ZNF646-204ENST00000564189 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
ZNF646-204ENST00000564189 BICRAQ9NZM4 1560 aa35.98■■■■□ 3.35
ZNF646-204ENST00000564189 SCRIBQ14160 1630 aa35.57■■■■□ 3.28
ZNF646-204ENST00000564189 SHROOM4Q9ULL8 1493 aa35.45■■■■□ 3.27
ZNF646-204ENST00000564189 EIF4G1Q04637 1599 aaKnown RBP35.01■■■■□ 3.2
ZNF646-204ENST00000564189 CC2D2AQ9P2K1 1620 aa35.01■■■■□ 3.19
ZNF646-204ENST00000564189 CECR2Q9BXF3 1484 aa34.83■■■■□ 3.17
ZNF646-204ENST00000564189 NCAPD3P42695 1498 aa34.02■■■■□ 3.04
ZNF646-204ENST00000564189 SMARCA4P51532 1647 aa34■■■■□ 3.03
ZNF646-204ENST00000564189 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.03
ZNF646-204ENST00000564189 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
ZNF646-204ENST00000564189 SMARCA2P51531 1590 aa33.84■■■■□ 3.01
ZNF646-204ENST00000564189 HMGXB3Q12766 1538 aa33.78■■■■□ 3
ZNF646-204ENST00000564189 PEG3Q9GZU2 1588 aa33.7■■■□□ 2.99
ZNF646-204ENST00000564189 MROH2BQ7Z745 1585 aa33.68■■■□□ 2.98
ZNF646-204ENST00000564189 BAZ1BQ9UIG0 1483 aaKnown RBP33.6■■■□□ 2.97
ZNF646-204ENST00000564189 NESP48681 1621 aa33.38■■■□□ 2.93
ZNF646-204ENST00000564189 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
ZNF646-204ENST00000564189 WIZO95785 1651 aa33.28■■■□□ 2.92
ZNF646-204ENST00000564189 CUX2O14529 1486 aa33.21■■■□□ 2.91
ZNF646-204ENST00000564189 LAMC3Q9Y6N6 1575 aa33.17■■■□□ 2.9
ZNF646-204ENST00000564189 RSF1Q96T23 1441 aaPredicted RBP33.1■■■□□ 2.89
ZNF646-204ENST00000564189 CADPSQ9ULU8 1353 aa32.98■■■□□ 2.87
ZNF646-204ENST00000564189 THOC2Q8NI27 1593 aaKnown RBP32.97■■■□□ 2.87
ZNF646-204ENST00000564189 KIF21AQ7Z4S6 1674 aa32.95■■■□□ 2.87
ZNF646-204ENST00000564189 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
ZNF646-204ENST00000564189 DNAJC5Q9H3Z4 198 aa32.87■■■□□ 2.85
ZNF646-204ENST00000564189 TOP2AP11388 1531 aaKnown RBP32.86■■■□□ 2.85
ZNF646-204ENST00000564189 CFTRP13569 1480 aa32.69■■■□□ 2.82
ZNF646-204ENST00000564189 MRC2Q9UBG0 1479 aa32.65■■■□□ 2.82
ZNF646-204ENST00000564189 WDR62O43379 1518 aa32.59■■■□□ 2.81
ZNF646-204ENST00000564189 FANCD2Q9BXW9 1451 aa32.59■■■□□ 2.81
ZNF646-204ENST00000564189 CEP164Q9UPV0 1460 aa32.56■■■□□ 2.8
ZNF646-204ENST00000564189 CCDC88BA6NC98 1476 aa32.51■■■□□ 2.79
ZNF646-204ENST00000564189 PRDM2Q13029 1718 aa32.39■■■□□ 2.78
ZNF646-204ENST00000564189 URB2Q14146 1524 aaKnown RBP32.34■■■□□ 2.77
ZNF646-204ENST00000564189 TOPBP1Q92547 1522 aa32.03■■■□□ 2.72
ZNF646-204ENST00000564189 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
ZNF646-204ENST00000564189 DNMBPQ6XZF7 1577 aa31.93■■■□□ 2.7
ZNF646-204ENST00000564189 IFT140Q96RY7 1462 aa31.92■■■□□ 2.7
ZNF646-204ENST00000564189 ZNF608Q9ULD9 1512 aaPredicted RBP31.89■■■□□ 2.7
ZNF646-204ENST00000564189 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
ZNF646-204ENST00000564189 OSCARQ8IYS5 282 aa31.75■■■□□ 2.67
ZNF646-204ENST00000564189 TARBP1Q13395 1621 aaKnown RBP31.75■■■□□ 2.67
ZNF646-204ENST00000564189 POLA1P09884 1462 aaPredicted RBP31.72■■■□□ 2.67
ZNF646-204ENST00000564189 EIF4G3O43432 1585 aaKnown RBP31.69■■■□□ 2.66
ZNF646-204ENST00000564189 AQRO60306 1485 aaKnown RBP eCLIP31.62■■■□□ 2.65
ZNF646-204ENST00000564189 CUX1P39880 1505 aa31.61■■■□□ 2.65
ZNF646-204ENST00000564189 RAD54L2Q9Y4B4 1467 aa31.6■■■□□ 2.65
ZNF646-204ENST00000564189 SOGA1O94964 1423 aa31.57■■■□□ 2.64
ZNF646-204ENST00000564189 FGD5Q6ZNL6 1462 aa31.56■■■□□ 2.64
ZNF646-204ENST00000564189 TDRD9Q8NDG6 1382 aaKnown RBP31.47■■■□□ 2.63
ZNF646-204ENST00000564189 TRIM41Q8WV44 630 aa31.47■■■□□ 2.63
ZNF646-204ENST00000564189 CHD1O14646 1710 aa31.41■■■□□ 2.62
ZNF646-204ENST00000564189 WDR97A6NE52 1622 aa31.4■■■□□ 2.62
ZNF646-204ENST00000564189 RIMBP3CA6NJZ7 1639 aa31.33■■■□□ 2.61
ZNF646-204ENST00000564189 RIMBP3BA6NNM3 1639 aa31.33■■■□□ 2.61
ZNF646-204ENST00000564189 RIMBP3Q9UFD9 1639 aa31.33■■■□□ 2.61
ZNF646-204ENST00000564189 SNAPC4Q5SXM2 1469 aa31.28■■■□□ 2.6
ZNF646-204ENST00000564189 FBLN2P98095 1184 aa31.27■■■□□ 2.6
ZNF646-204ENST00000564189 ARHGEF11O15085 1522 aa31.25■■■□□ 2.59
ZNF646-204ENST00000564189 GRIN2BQ13224 1484 aa31.24■■■□□ 2.59
ZNF646-204ENST00000564189 ABCA10Q8WWZ4 1543 aa31.24■■■□□ 2.59
ZNF646-204ENST00000564189 MAGI1Q96QZ7 1491 aaPredicted RBP31.21■■■□□ 2.59
ZNF646-204ENST00000564189 BIVM-ERCC5R4GMW8 1640 aa31.19■■■□□ 2.58
ZNF646-204ENST00000564189 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
ZNF646-204ENST00000564189 TOP2BQ02880 1626 aa31.18■■■□□ 2.58
ZNF646-204ENST00000564189 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
ZNF646-204ENST00000564189 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
ZNF646-204ENST00000564189 WRNQ14191 1432 aaPredicted RBP eCLIP31.16■■■□□ 2.58
ZNF646-204ENST00000564189 PBRM1Q86U86 1689 aa31.16■■■□□ 2.58
ZNF646-204ENST00000564189 SYNJ2O15056 1496 aa31.11■■■□□ 2.57
ZNF646-204ENST00000564189 CHMP7Q8WUX9 453 aaPredicted RBP31.11■■■□□ 2.57
ZNF646-204ENST00000564189 CLASP1Q7Z460 1538 aa31.07■■■□□ 2.56
ZNF646-204ENST00000564189 ARAP1Q96P48 1450 aa30.98■■■□□ 2.55
ZNF646-204ENST00000564189 CYB5RLQ6IPT4 315 aa30.98■■■□□ 2.55
ZNF646-204ENST00000564189 ADAMTS12P58397 1594 aa30.88■■■□□ 2.53
ZNF646-204ENST00000564189 GRIN2AQ12879 1464 aa30.85■■■□□ 2.53
ZNF646-204ENST00000564189 ERICH3Q5RHP9 1530 aa30.83■■■□□ 2.53
ZNF646-204ENST00000564189 FHAD1B1AJZ9 1412 aa30.8■■■□□ 2.52
ZNF646-204ENST00000564189 NUP160Q12769 1436 aa30.76■■■□□ 2.51
ZNF646-204ENST00000564189 CEP170Q5SW79 1584 aa30.75■■■□□ 2.51
ZNF646-204ENST00000564189 ERCC6L2Q5T890 1561 aa30.63■■■□□ 2.49
ZNF646-204ENST00000564189 SHROOM2Q13796 1616 aa30.61■■■□□ 2.49
ZNF646-204ENST00000564189 IGF1RP08069 1367 aa30.55■■■□□ 2.48
ZNF646-204ENST00000564189 KIF27Q86VH2 1401 aa30.54■■■□□ 2.48
ZNF646-204ENST00000564189 TRHP20396 242 aaPredicted RBP30.47■■■□□ 2.47
ZNF646-204ENST00000564189 RUSC2Q8N2Y8 1516 aa30.45■■■□□ 2.47
ZNF646-204ENST00000564189 CUL7Q14999 1698 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 949.2 ms