RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
SCAMP2-204ENST00000563829 HRCP23327 699 aa20.99■□□□□ 0.95
SCAMP2-204ENST00000563829 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
SCAMP2-204ENST00000563829 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
SCAMP2-204ENST00000563829 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
SCAMP2-204ENST00000563829 PELP1Q8IZL8 1130 aaKnown RBP20.47■□□□□ 0.87
SCAMP2-204ENST00000563829 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
SCAMP2-204ENST00000563829 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
SCAMP2-204ENST00000563829 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
SCAMP2-204ENST00000563829 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
SCAMP2-204ENST00000563829 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
SCAMP2-204ENST00000563829 TRIM26Q12899 539 aaPredicted RBP19.76■□□□□ 0.75
SCAMP2-204ENST00000563829 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
SCAMP2-204ENST00000563829 MYT1Q01538 1121 aa19.69■□□□□ 0.74
SCAMP2-204ENST00000563829 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
SCAMP2-204ENST00000563829 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
SCAMP2-204ENST00000563829 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
SCAMP2-204ENST00000563829 NEUROD1Q13562 356 aa19.42■□□□□ 0.7
SCAMP2-204ENST00000563829 GTF3C3Q9Y5Q9 886 aa19.36■□□□□ 0.69
SCAMP2-204ENST00000563829 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
SCAMP2-204ENST00000563829 CENPBP07199 599 aaPredicted RBP19.18■□□□□ 0.66
SCAMP2-204ENST00000563829 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
SCAMP2-204ENST00000563829 DIEXFQ68CQ4 756 aaKnown RBP19.04■□□□□ 0.64
SCAMP2-204ENST00000563829 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
SCAMP2-204ENST00000563829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
SCAMP2-204ENST00000563829 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
SCAMP2-204ENST00000563829 CCER1Q8TC90 406 aaPredicted RBP18.97■□□□□ 0.63
SCAMP2-204ENST00000563829 YTHDC1Q96MU7 727 aaKnown RBP18.89■□□□□ 0.61
SCAMP2-204ENST00000563829 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
SCAMP2-204ENST00000563829 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
SCAMP2-204ENST00000563829 ZNF316A6NFI3 1004 aaPredicted RBP18.58■□□□□ 0.57
SCAMP2-204ENST00000563829 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
SCAMP2-204ENST00000563829 MIER1Q8N108 512 aa18.54■□□□□ 0.56
SCAMP2-204ENST00000563829 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
SCAMP2-204ENST00000563829 SUPT16HQ9Y5B9 1047 aaKnown RBP18.32■□□□□ 0.52
SCAMP2-204ENST00000563829 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
SCAMP2-204ENST00000563829 TSHZ2Q9NRE2 1034 aa18.29■□□□□ 0.52
SCAMP2-204ENST00000563829 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
SCAMP2-204ENST00000563829 ABCC9O60706 1549 aa18.28■□□□□ 0.52
SCAMP2-204ENST00000563829 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
SCAMP2-204ENST00000563829 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
SCAMP2-204ENST00000563829 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
SCAMP2-204ENST00000563829 BCANQ96GW7 911 aa18.05■□□□□ 0.48
SCAMP2-204ENST00000563829 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
SCAMP2-204ENST00000563829 CEP162Q5TB80 1403 aa18■□□□□ 0.47
SCAMP2-204ENST00000563829 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
SCAMP2-204ENST00000563829 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-204ENST00000563829 PRKCSHP14314 528 aaPredicted RBP17.87■□□□□ 0.45
SCAMP2-204ENST00000563829 RBM19Q9Y4C8 960 aaKnown RBP17.87■□□□□ 0.45
SCAMP2-204ENST00000563829 FKBP8Q14318 412 aa17.86■□□□□ 0.45
SCAMP2-204ENST00000563829 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
SCAMP2-204ENST00000563829 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
SCAMP2-204ENST00000563829 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
SCAMP2-204ENST00000563829 ITGAEP38570 1179 aa17.76■□□□□ 0.43
SCAMP2-204ENST00000563829 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
SCAMP2-204ENST00000563829 SOGA1O94964 1423 aa17.74■□□□□ 0.43
SCAMP2-204ENST00000563829 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
SCAMP2-204ENST00000563829 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.43
SCAMP2-204ENST00000563829 MSH5O43196 834 aa17.71■□□□□ 0.43
SCAMP2-204ENST00000563829 NEFLP07196 543 aa17.69■□□□□ 0.42
SCAMP2-204ENST00000563829 WIZO95785 1651 aa17.68■□□□□ 0.42
SCAMP2-204ENST00000563829 APLP2Q06481 763 aa17.66■□□□□ 0.42
SCAMP2-204ENST00000563829 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
SCAMP2-204ENST00000563829 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
SCAMP2-204ENST00000563829 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
SCAMP2-204ENST00000563829 DHX57Q6P158 1386 aaKnown RBP17.59■□□□□ 0.41
SCAMP2-204ENST00000563829 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
SCAMP2-204ENST00000563829 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
SCAMP2-204ENST00000563829 GOLGA3Q08378 1498 aa17.55■□□□□ 0.4
SCAMP2-204ENST00000563829 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
SCAMP2-204ENST00000563829 CLIP1P30622 1438 aa17.49■□□□□ 0.39
SCAMP2-204ENST00000563829 DEKP35659 375 aaKnown RBP17.48■□□□□ 0.39
SCAMP2-204ENST00000563829 EEA1Q15075 1411 aa17.48■□□□□ 0.39
SCAMP2-204ENST00000563829 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.39
SCAMP2-204ENST00000563829 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
SCAMP2-204ENST00000563829 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
SCAMP2-204ENST00000563829 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
SCAMP2-204ENST00000563829 ANO8Q9HCE9 1232 aaPredicted RBP17.43■□□□□ 0.38
SCAMP2-204ENST00000563829 IRX6P78412 446 aaPredicted RBP17.41■□□□□ 0.38
SCAMP2-204ENST00000563829 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
SCAMP2-204ENST00000563829 HIRIP3Q9BW71 556 aaPredicted RBP17.35■□□□□ 0.37
SCAMP2-204ENST00000563829 NBR1Q14596 966 aa17.34■□□□□ 0.37
SCAMP2-204ENST00000563829 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
SCAMP2-204ENST00000563829 NACADO15069 1562 aa17.31■□□□□ 0.36
SCAMP2-204ENST00000563829 ANP32CO43423 234 aa17.3■□□□□ 0.36
SCAMP2-204ENST00000563829 KANK4Q5T7N3 995 aaPredicted RBP17.29■□□□□ 0.36
SCAMP2-204ENST00000563829 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
SCAMP2-204ENST00000563829 SALL2Q9Y467 1007 aaPredicted RBP17.26■□□□□ 0.35
SCAMP2-204ENST00000563829 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
SCAMP2-204ENST00000563829 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-204ENST00000563829 KIF21BO75037 1637 aa17.23■□□□□ 0.35
SCAMP2-204ENST00000563829 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
SCAMP2-204ENST00000563829 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCAMP2-204ENST00000563829 CCDC136Q96JN2 1154 aa17.21■□□□□ 0.35
SCAMP2-204ENST00000563829 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
SCAMP2-204ENST00000563829 SIN3AQ96ST3 1273 aa17.21■□□□□ 0.35
SCAMP2-204ENST00000563829 NOP58Q9Y2X3 529 aaKnown RBP17.18■□□□□ 0.34
SCAMP2-204ENST00000563829 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
SCAMP2-204ENST00000563829 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
SCAMP2-204ENST00000563829 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms