RNA–Protein interactions for RNA: ENST00000563540.1

AC093249.2-201, humanhuman

TSL 3 BASIC

Gene AC093249.2, Length 482 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093249.2-201ENST00000563540 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
AC093249.2-201ENST00000563540 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
AC093249.2-201ENST00000563540 ABCC9O60706 1549 aa23.07■■□□□ 1.28
AC093249.2-201ENST00000563540 NACADO15069 1562 aa22.27■■□□□ 1.16
AC093249.2-201ENST00000563540 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
AC093249.2-201ENST00000563540 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
AC093249.2-201ENST00000563540 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
AC093249.2-201ENST00000563540 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
AC093249.2-201ENST00000563540 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
AC093249.2-201ENST00000563540 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
AC093249.2-201ENST00000563540 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
AC093249.2-201ENST00000563540 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
AC093249.2-201ENST00000563540 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
AC093249.2-201ENST00000563540 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
AC093249.2-201ENST00000563540 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
AC093249.2-201ENST00000563540 EIF4G1Q04637 1599 aaKnown RBP21.01■□□□□ 0.95
AC093249.2-201ENST00000563540 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
AC093249.2-201ENST00000563540 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
AC093249.2-201ENST00000563540 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
AC093249.2-201ENST00000563540 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
AC093249.2-201ENST00000563540 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
AC093249.2-201ENST00000563540 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
AC093249.2-201ENST00000563540 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
AC093249.2-201ENST00000563540 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
AC093249.2-201ENST00000563540 NCAPD3P42695 1498 aa20.52■□□□□ 0.88
AC093249.2-201ENST00000563540 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
AC093249.2-201ENST00000563540 WIZO95785 1651 aa20.38■□□□□ 0.85
AC093249.2-201ENST00000563540 BAZ1BQ9UIG0 1483 aaKnown RBP20.37■□□□□ 0.85
AC093249.2-201ENST00000563540 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
AC093249.2-201ENST00000563540 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
AC093249.2-201ENST00000563540 NESP48681 1621 aa20■□□□□ 0.79
AC093249.2-201ENST00000563540 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
AC093249.2-201ENST00000563540 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
AC093249.2-201ENST00000563540 CCDC88BA6NC98 1476 aa19.9■□□□□ 0.78
AC093249.2-201ENST00000563540 ERCC6Q03468 1493 aa19.85■□□□□ 0.77
AC093249.2-201ENST00000563540 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
AC093249.2-201ENST00000563540 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
AC093249.2-201ENST00000563540 CFTRP13569 1480 aa19.83■□□□□ 0.76
AC093249.2-201ENST00000563540 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
AC093249.2-201ENST00000563540 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
AC093249.2-201ENST00000563540 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
AC093249.2-201ENST00000563540 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
AC093249.2-201ENST00000563540 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
AC093249.2-201ENST00000563540 CUX2O14529 1486 aa19.65■□□□□ 0.74
AC093249.2-201ENST00000563540 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
AC093249.2-201ENST00000563540 WDR62O43379 1518 aa19.57■□□□□ 0.72
AC093249.2-201ENST00000563540 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
AC093249.2-201ENST00000563540 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
AC093249.2-201ENST00000563540 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
AC093249.2-201ENST00000563540 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
AC093249.2-201ENST00000563540 CUX1P39880 1505 aa19.3■□□□□ 0.68
AC093249.2-201ENST00000563540 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
AC093249.2-201ENST00000563540 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
AC093249.2-201ENST00000563540 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
AC093249.2-201ENST00000563540 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
AC093249.2-201ENST00000563540 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
AC093249.2-201ENST00000563540 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
AC093249.2-201ENST00000563540 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
AC093249.2-201ENST00000563540 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
AC093249.2-201ENST00000563540 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
AC093249.2-201ENST00000563540 SOGA1O94964 1423 aa19.14■□□□□ 0.65
AC093249.2-201ENST00000563540 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
AC093249.2-201ENST00000563540 WDR97A6NE52 1622 aa19.13■□□□□ 0.65
AC093249.2-201ENST00000563540 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
AC093249.2-201ENST00000563540 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
AC093249.2-201ENST00000563540 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.64
AC093249.2-201ENST00000563540 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
AC093249.2-201ENST00000563540 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
AC093249.2-201ENST00000563540 PBRM1Q86U86 1689 aa18.97■□□□□ 0.63
AC093249.2-201ENST00000563540 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
AC093249.2-201ENST00000563540 GRIN2BQ13224 1484 aa18.91■□□□□ 0.62
AC093249.2-201ENST00000563540 CHD1O14646 1710 aa18.91■□□□□ 0.62
AC093249.2-201ENST00000563540 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
AC093249.2-201ENST00000563540 SNAPC4Q5SXM2 1469 aa18.88■□□□□ 0.61
AC093249.2-201ENST00000563540 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
AC093249.2-201ENST00000563540 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
AC093249.2-201ENST00000563540 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
AC093249.2-201ENST00000563540 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
AC093249.2-201ENST00000563540 ADAMTS12P58397 1594 aa18.78■□□□□ 0.6
AC093249.2-201ENST00000563540 KIF27Q86VH2 1401 aa18.76■□□□□ 0.59
AC093249.2-201ENST00000563540 FBLN2P98095 1184 aa18.73■□□□□ 0.59
AC093249.2-201ENST00000563540 TRIM41Q8WV44 630 aa18.73■□□□□ 0.59
AC093249.2-201ENST00000563540 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
AC093249.2-201ENST00000563540 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
AC093249.2-201ENST00000563540 CUL7Q14999 1698 aa18.69■□□□□ 0.58
AC093249.2-201ENST00000563540 GRIN2AQ12879 1464 aa18.68■□□□□ 0.58
AC093249.2-201ENST00000563540 IGF1RP08069 1367 aa18.68■□□□□ 0.58
AC093249.2-201ENST00000563540 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
AC093249.2-201ENST00000563540 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
AC093249.2-201ENST00000563540 CEP170Q5SW79 1584 aa18.61■□□□□ 0.57
AC093249.2-201ENST00000563540 NUP160Q12769 1436 aa18.6■□□□□ 0.57
AC093249.2-201ENST00000563540 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
AC093249.2-201ENST00000563540 RIMBP3CA6NJZ7 1639 aa18.57■□□□□ 0.56
AC093249.2-201ENST00000563540 RIMBP3BA6NNM3 1639 aa18.57■□□□□ 0.56
AC093249.2-201ENST00000563540 RIMBP3Q9UFD9 1639 aa18.57■□□□□ 0.56
AC093249.2-201ENST00000563540 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
AC093249.2-201ENST00000563540 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
AC093249.2-201ENST00000563540 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
AC093249.2-201ENST00000563540 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
AC093249.2-201ENST00000563540 EEA1Q15075 1411 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms