RNA–Protein interactions for RNA: ENST00000562940.6

MTHFSD-209, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 1 (best)

Gene MTHFSD, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-209ENST00000562940 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
MTHFSD-209ENST00000562940 CCDC180Q9P1Z9 1646 aa29.39■■■□□ 2.3
MTHFSD-209ENST00000562940 ABCC9O60706 1549 aa27.99■■■□□ 2.07
MTHFSD-209ENST00000562940 ZCCHC6Q5VYS8 1495 aaKnown RBP27.8■■■□□ 2.04
MTHFSD-209ENST00000562940 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
MTHFSD-209ENST00000562940 MYO15BQ96JP2 1530 aa27.42■■□□□ 1.98
MTHFSD-209ENST00000562940 DCAF8L2P0C7V8 631 aa27.42■■□□□ 1.98
MTHFSD-209ENST00000562940 NACADO15069 1562 aa27.41■■□□□ 1.98
MTHFSD-209ENST00000562940 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.97
MTHFSD-209ENST00000562940 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
MTHFSD-209ENST00000562940 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
MTHFSD-209ENST00000562940 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
MTHFSD-209ENST00000562940 BICRAQ9NZM4 1560 aa26.3■■□□□ 1.8
MTHFSD-209ENST00000562940 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
MTHFSD-209ENST00000562940 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
MTHFSD-209ENST00000562940 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
MTHFSD-209ENST00000562940 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
MTHFSD-209ENST00000562940 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
MTHFSD-209ENST00000562940 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
MTHFSD-209ENST00000562940 RSF1Q96T23 1441 aaPredicted RBP25.45■■□□□ 1.66
MTHFSD-209ENST00000562940 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
MTHFSD-209ENST00000562940 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.65
MTHFSD-209ENST00000562940 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
MTHFSD-209ENST00000562940 WIZO95785 1651 aa25.33■■□□□ 1.65
MTHFSD-209ENST00000562940 SUPT5HO00267 1087 aaKnown RBP25.29■■□□□ 1.64
MTHFSD-209ENST00000562940 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
MTHFSD-209ENST00000562940 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
MTHFSD-209ENST00000562940 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
MTHFSD-209ENST00000562940 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
MTHFSD-209ENST00000562940 NCAPD3P42695 1498 aa25.17■■□□□ 1.62
MTHFSD-209ENST00000562940 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
MTHFSD-209ENST00000562940 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
MTHFSD-209ENST00000562940 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
MTHFSD-209ENST00000562940 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
MTHFSD-209ENST00000562940 CFTRP13569 1480 aa24.48■■□□□ 1.51
MTHFSD-209ENST00000562940 CADPSQ9ULU8 1353 aa24.48■■□□□ 1.51
MTHFSD-209ENST00000562940 NESP48681 1621 aa24.35■■□□□ 1.49
MTHFSD-209ENST00000562940 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
MTHFSD-209ENST00000562940 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
MTHFSD-209ENST00000562940 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
MTHFSD-209ENST00000562940 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
MTHFSD-209ENST00000562940 ERCC6Q03468 1493 aa24.21■■□□□ 1.47
MTHFSD-209ENST00000562940 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
MTHFSD-209ENST00000562940 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.44
MTHFSD-209ENST00000562940 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
MTHFSD-209ENST00000562940 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
MTHFSD-209ENST00000562940 BIVM-ERCC5R4GMW8 1640 aa24■■□□□ 1.43
MTHFSD-209ENST00000562940 TOP2BQ02880 1626 aa23.98■■□□□ 1.43
MTHFSD-209ENST00000562940 THOC2Q8NI27 1593 aaKnown RBP23.97■■□□□ 1.43
MTHFSD-209ENST00000562940 SYNJ1O43426 1573 aa23.96■■□□□ 1.43
MTHFSD-209ENST00000562940 CUX1P39880 1505 aa23.94■■□□□ 1.42
MTHFSD-209ENST00000562940 WDR62O43379 1518 aa23.94■■□□□ 1.42
MTHFSD-209ENST00000562940 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
MTHFSD-209ENST00000562940 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
MTHFSD-209ENST00000562940 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
MTHFSD-209ENST00000562940 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.41
MTHFSD-209ENST00000562940 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
MTHFSD-209ENST00000562940 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
MTHFSD-209ENST00000562940 CUX2O14529 1486 aa23.69■■□□□ 1.38
MTHFSD-209ENST00000562940 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
MTHFSD-209ENST00000562940 SOGA1O94964 1423 aa23.66■■□□□ 1.38
MTHFSD-209ENST00000562940 WDR97A6NE52 1622 aa23.64■■□□□ 1.38
MTHFSD-209ENST00000562940 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
MTHFSD-209ENST00000562940 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
MTHFSD-209ENST00000562940 EEA1Q15075 1411 aa23.59■■□□□ 1.37
MTHFSD-209ENST00000562940 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
MTHFSD-209ENST00000562940 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
MTHFSD-209ENST00000562940 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
MTHFSD-209ENST00000562940 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
MTHFSD-209ENST00000562940 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
MTHFSD-209ENST00000562940 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
MTHFSD-209ENST00000562940 CUL7Q14999 1698 aa23.39■■□□□ 1.34
MTHFSD-209ENST00000562940 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
MTHFSD-209ENST00000562940 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
MTHFSD-209ENST00000562940 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
MTHFSD-209ENST00000562940 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
MTHFSD-209ENST00000562940 FAM9AQ8IZU1 332 aaPredicted RBP23.35■■□□□ 1.33
MTHFSD-209ENST00000562940 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
MTHFSD-209ENST00000562940 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.33
MTHFSD-209ENST00000562940 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
MTHFSD-209ENST00000562940 MAGI1Q96QZ7 1491 aaPredicted RBP23.28■■□□□ 1.32
MTHFSD-209ENST00000562940 KIF21BO75037 1637 aa23.27■■□□□ 1.32
MTHFSD-209ENST00000562940 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
MTHFSD-209ENST00000562940 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
MTHFSD-209ENST00000562940 IGF1RP08069 1367 aa23.21■■□□□ 1.31
MTHFSD-209ENST00000562940 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
MTHFSD-209ENST00000562940 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
MTHFSD-209ENST00000562940 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
MTHFSD-209ENST00000562940 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
MTHFSD-209ENST00000562940 PRXQ9BXM0 1461 aa23.17■■□□□ 1.3
MTHFSD-209ENST00000562940 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
MTHFSD-209ENST00000562940 CHD1O14646 1710 aa23.07■■□□□ 1.28
MTHFSD-209ENST00000562940 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
MTHFSD-209ENST00000562940 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
MTHFSD-209ENST00000562940 CTTNBP2Q8WZ74 1663 aa23.05■■□□□ 1.28
MTHFSD-209ENST00000562940 FBLN2P98095 1184 aa23.01■■□□□ 1.27
MTHFSD-209ENST00000562940 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
MTHFSD-209ENST00000562940 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
MTHFSD-209ENST00000562940 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
MTHFSD-209ENST00000562940 IQGAP2Q13576 1575 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms