RNA–Protein interactions for RNA: ENST00000562750.1

ACSF3-217, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 3

Gene ACSF3, Length 506 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-217ENST00000562750 NISCHQ9Y2I1 1504 aa46.7■■■■■ 5.07
ACSF3-217ENST00000562750 CCDC180Q9P1Z9 1646 aa41.59■■■■■ 4.25
ACSF3-217ENST00000562750 ABCC9O60706 1549 aa40.42■■■■■ 4.06
ACSF3-217ENST00000562750 NACADO15069 1562 aa39.1■■■■□ 3.85
ACSF3-217ENST00000562750 RB1CC1Q8TDY2 1594 aa39.08■■■■□ 3.85
ACSF3-217ENST00000562750 MYO15BQ96JP2 1530 aa39■■■■□ 3.83
ACSF3-217ENST00000562750 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
ACSF3-217ENST00000562750 DCAF1Q9Y4B6 1507 aa38.79■■■■□ 3.8
ACSF3-217ENST00000562750 DCAF8L2P0C7V8 631 aa38.73■■■■□ 3.79
ACSF3-217ENST00000562750 UNC13AQ9UPW8 1703 aa38.1■■■■□ 3.69
ACSF3-217ENST00000562750 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
ACSF3-217ENST00000562750 SCRIBQ14160 1630 aa37.72■■■■□ 3.63
ACSF3-217ENST00000562750 PABPN1Q86U42 306 aaKnown RBP eCLIP37.72■■■■□ 3.63
ACSF3-217ENST00000562750 SHROOM4Q9ULL8 1493 aa37.69■■■■□ 3.62
ACSF3-217ENST00000562750 DNAJC5BQ9UF47 199 aa37.06■■■■□ 3.52
ACSF3-217ENST00000562750 EIF4G1Q04637 1599 aaKnown RBP36.85■■■■□ 3.49
ACSF3-217ENST00000562750 CC2D2AQ9P2K1 1620 aa36.66■■■■□ 3.46
ACSF3-217ENST00000562750 CECR2Q9BXF3 1484 aa36.41■■■■□ 3.42
ACSF3-217ENST00000562750 BAZ1AQ9NRL2 1556 aaPredicted RBP36.22■■■■□ 3.39
ACSF3-217ENST00000562750 SMARCA4P51532 1647 aa36.2■■■■□ 3.39
ACSF3-217ENST00000562750 NCAPD3P42695 1498 aa36.07■■■■□ 3.37
ACSF3-217ENST00000562750 SMARCA2P51531 1590 aa36.03■■■■□ 3.36
ACSF3-217ENST00000562750 ATAD2BQ9ULI0 1458 aa36.02■■■■□ 3.36
ACSF3-217ENST00000562750 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
ACSF3-217ENST00000562750 MROH2BQ7Z745 1585 aa35.9■■■■□ 3.34
ACSF3-217ENST00000562750 HMGXB3Q12766 1538 aa35.9■■■■□ 3.34
ACSF3-217ENST00000562750 BAZ1BQ9UIG0 1483 aaKnown RBP35.69■■■■□ 3.3
ACSF3-217ENST00000562750 RSF1Q96T23 1441 aaPredicted RBP35.55■■■■□ 3.28
ACSF3-217ENST00000562750 WIZO95785 1651 aa35.49■■■■□ 3.27
ACSF3-217ENST00000562750 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
ACSF3-217ENST00000562750 LAMC3Q9Y6N6 1575 aa35.09■■■■□ 3.21
ACSF3-217ENST00000562750 NESP48681 1621 aa34.99■■■■□ 3.19
ACSF3-217ENST00000562750 CADPSQ9ULU8 1353 aa34.97■■■■□ 3.19
ACSF3-217ENST00000562750 ERCC6Q03468 1493 aa34.9■■■■□ 3.18
ACSF3-217ENST00000562750 PDS5BQ9NTI5 1447 aa34.84■■■■□ 3.17
ACSF3-217ENST00000562750 CFTRP13569 1480 aa34.78■■■■□ 3.16
ACSF3-217ENST00000562750 CCDC88BA6NC98 1476 aa34.76■■■■□ 3.15
ACSF3-217ENST00000562750 CUX2O14529 1486 aa34.67■■■■□ 3.14
ACSF3-217ENST00000562750 KIF21AQ7Z4S6 1674 aa34.62■■■■□ 3.13
ACSF3-217ENST00000562750 THOC2Q8NI27 1593 aaKnown RBP34.57■■■■□ 3.12
ACSF3-217ENST00000562750 PRDM2Q13029 1718 aa34.52■■■■□ 3.12
ACSF3-217ENST00000562750 FANCD2Q9BXW9 1451 aa34.52■■■■□ 3.12
ACSF3-217ENST00000562750 CEP164Q9UPV0 1460 aa34.48■■■■□ 3.11
ACSF3-217ENST00000562750 SUPT5HO00267 1087 aaKnown RBP34.46■■■■□ 3.11
ACSF3-217ENST00000562750 MRC2Q9UBG0 1479 aa34.44■■■■□ 3.1
ACSF3-217ENST00000562750 WDR62O43379 1518 aa34.35■■■■□ 3.09
ACSF3-217ENST00000562750 URB2Q14146 1524 aaKnown RBP34.14■■■■□ 3.06
ACSF3-217ENST00000562750 ABCC8Q09428 1581 aa34.11■■■■□ 3.05
ACSF3-217ENST00000562750 TOPBP1Q92547 1522 aa33.97■■■■□ 3.03
ACSF3-217ENST00000562750 DNMBPQ6XZF7 1577 aa33.97■■■■□ 3.03
ACSF3-217ENST00000562750 IFT140Q96RY7 1462 aa33.81■■■■□ 3
ACSF3-217ENST00000562750 CUX1P39880 1505 aa33.69■■■□□ 2.98
ACSF3-217ENST00000562750 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
ACSF3-217ENST00000562750 TARBP1Q13395 1621 aaKnown RBP33.63■■■□□ 2.97
ACSF3-217ENST00000562750 FGD5Q6ZNL6 1462 aa33.57■■■□□ 2.97
ACSF3-217ENST00000562750 SOGA1O94964 1423 aa33.53■■■□□ 2.96
ACSF3-217ENST00000562750 WDR97A6NE52 1622 aa33.52■■■□□ 2.96
ACSF3-217ENST00000562750 ZNF608Q9ULD9 1512 aaPredicted RBP33.52■■■□□ 2.96
ACSF3-217ENST00000562750 WRNQ14191 1432 aaPredicted RBP eCLIP33.52■■■□□ 2.96
ACSF3-217ENST00000562750 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
ACSF3-217ENST00000562750 TOP2BQ02880 1626 aa33.48■■■□□ 2.95
ACSF3-217ENST00000562750 BIVM-ERCC5R4GMW8 1640 aa33.48■■■□□ 2.95
ACSF3-217ENST00000562750 RAD54L2Q9Y4B4 1467 aa33.44■■■□□ 2.94
ACSF3-217ENST00000562750 EIF4G3O43432 1585 aaKnown RBP33.44■■■□□ 2.94
ACSF3-217ENST00000562750 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
ACSF3-217ENST00000562750 ABCA10Q8WWZ4 1543 aa33.34■■■□□ 2.93
ACSF3-217ENST00000562750 AQRO60306 1485 aaKnown RBP eCLIP33.33■■■□□ 2.93
ACSF3-217ENST00000562750 TDRD9Q8NDG6 1382 aaKnown RBP33.27■■■□□ 2.92
ACSF3-217ENST00000562750 GRIN2BQ13224 1484 aa33.19■■■□□ 2.9
ACSF3-217ENST00000562750 ABCA5Q8WWZ7 1642 aa33.18■■■□□ 2.9
ACSF3-217ENST00000562750 OSCARQ8IYS5 282 aa33.16■■■□□ 2.9
ACSF3-217ENST00000562750 GAPVD1Q14C86 1478 aa33.16■■■□□ 2.9
ACSF3-217ENST00000562750 MAGI1Q96QZ7 1491 aaPredicted RBP33.14■■■□□ 2.9
ACSF3-217ENST00000562750 PBRM1Q86U86 1689 aa33.06■■■□□ 2.88
ACSF3-217ENST00000562750 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
ACSF3-217ENST00000562750 CHD1O14646 1710 aa32.98■■■□□ 2.87
ACSF3-217ENST00000562750 SYNJ2O15056 1496 aa32.98■■■□□ 2.87
ACSF3-217ENST00000562750 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
ACSF3-217ENST00000562750 CHMP7Q8WUX9 453 aaPredicted RBP32.88■■■□□ 2.85
ACSF3-217ENST00000562750 FBLN2P98095 1184 aa32.85■■■□□ 2.85
ACSF3-217ENST00000562750 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
ACSF3-217ENST00000562750 FHAD1B1AJZ9 1412 aa32.83■■■□□ 2.85
ACSF3-217ENST00000562750 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
ACSF3-217ENST00000562750 GRIN2AQ12879 1464 aa32.74■■■□□ 2.83
ACSF3-217ENST00000562750 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
ACSF3-217ENST00000562750 IGF1RP08069 1367 aa32.7■■■□□ 2.82
ACSF3-217ENST00000562750 TRIM41Q8WV44 630 aa32.67■■■□□ 2.82
ACSF3-217ENST00000562750 CUL7Q14999 1698 aa32.66■■■□□ 2.82
ACSF3-217ENST00000562750 NUP160Q12769 1436 aa32.64■■■□□ 2.82
ACSF3-217ENST00000562750 ARHGEF11O15085 1522 aa32.59■■■□□ 2.81
ACSF3-217ENST00000562750 RIMBP3CA6NJZ7 1639 aa32.57■■■□□ 2.8
ACSF3-217ENST00000562750 RIMBP3BA6NNM3 1639 aa32.57■■■□□ 2.8
ACSF3-217ENST00000562750 RIMBP3Q9UFD9 1639 aa32.57■■■□□ 2.8
ACSF3-217ENST00000562750 CEP170Q5SW79 1584 aa32.53■■■□□ 2.8
ACSF3-217ENST00000562750 CARMIL1Q5VZK9 1371 aa32.48■■■□□ 2.79
ACSF3-217ENST00000562750 SHROOM2Q13796 1616 aa32.4■■■□□ 2.78
ACSF3-217ENST00000562750 RUSC2Q8N2Y8 1516 aa32.39■■■□□ 2.78
ACSF3-217ENST00000562750 KIAA0586Q9BVV6 1533 aa32.34■■■□□ 2.77
ACSF3-217ENST00000562750 RAPGEF2Q9Y4G8 1499 aa32.32■■■□□ 2.76
ACSF3-217ENST00000562750 EEA1Q15075 1411 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms