RNA–Protein interactions for RNA: ENST00000562591.1

AC018558.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC018558.1, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC018558.1-201ENST00000562591 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.04
AC018558.1-201ENST00000562591 ABCC9O60706 1549 aa13.9□□□□□ -0.19
AC018558.1-201ENST00000562591 CCDC180Q9P1Z9 1646 aa13.77□□□□□ -0.21
AC018558.1-201ENST00000562591 AEBP2Q6ZN18 517 aaPredicted RBP13.5□□□□□ -0.25
AC018558.1-201ENST00000562591 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
AC018558.1-201ENST00000562591 RB1CC1Q8TDY2 1594 aa13.19□□□□□ -0.3
AC018558.1-201ENST00000562591 NACADO15069 1562 aa13.09□□□□□ -0.31
AC018558.1-201ENST00000562591 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
AC018558.1-201ENST00000562591 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
AC018558.1-201ENST00000562591 MYO15BQ96JP2 1530 aa12.91□□□□□ -0.34
AC018558.1-201ENST00000562591 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
AC018558.1-201ENST00000562591 BICRAQ9NZM4 1560 aa12.8□□□□□ -0.36
AC018558.1-201ENST00000562591 DCAF1Q9Y4B6 1507 aa12.68□□□□□ -0.38
AC018558.1-201ENST00000562591 CHIC1Q5VXU3 224 aa12.68□□□□□ -0.38
AC018558.1-201ENST00000562591 SHROOM4Q9ULL8 1493 aa12.67□□□□□ -0.38
AC018558.1-201ENST00000562591 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.38
AC018558.1-201ENST00000562591 CECR2Q9BXF3 1484 aa12.56□□□□□ -0.4
AC018558.1-201ENST00000562591 CC2D2AQ9P2K1 1620 aa12.55□□□□□ -0.4
AC018558.1-201ENST00000562591 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
AC018558.1-201ENST00000562591 SCRIBQ14160 1630 aa12.5□□□□□ -0.41
AC018558.1-201ENST00000562591 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
AC018558.1-201ENST00000562591 NCAPD3P42695 1498 aa12.13□□□□□ -0.47
AC018558.1-201ENST00000562591 CUX2O14529 1486 aa12.08□□□□□ -0.48
AC018558.1-201ENST00000562591 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
AC018558.1-201ENST00000562591 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
AC018558.1-201ENST00000562591 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
AC018558.1-201ENST00000562591 HMGXB3Q12766 1538 aa11.96□□□□□ -0.49
AC018558.1-201ENST00000562591 SMARCA4P51532 1647 aa11.94□□□□□ -0.5
AC018558.1-201ENST00000562591 NESP48681 1621 aa11.89□□□□□ -0.51
AC018558.1-201ENST00000562591 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
AC018558.1-201ENST00000562591 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
AC018558.1-201ENST00000562591 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
AC018558.1-201ENST00000562591 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
AC018558.1-201ENST00000562591 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
AC018558.1-201ENST00000562591 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
AC018558.1-201ENST00000562591 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
AC018558.1-201ENST00000562591 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
AC018558.1-201ENST00000562591 KIF21AQ7Z4S6 1674 aa11.69□□□□□ -0.54
AC018558.1-201ENST00000562591 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
AC018558.1-201ENST00000562591 WDR62O43379 1518 aa11.63□□□□□ -0.55
AC018558.1-201ENST00000562591 WIZO95785 1651 aa11.59□□□□□ -0.55
AC018558.1-201ENST00000562591 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
AC018558.1-201ENST00000562591 CEP164Q9UPV0 1460 aa11.58□□□□□ -0.56
AC018558.1-201ENST00000562591 CFTRP13569 1480 aa11.57□□□□□ -0.56
AC018558.1-201ENST00000562591 FANCD2Q9BXW9 1451 aa11.57□□□□□ -0.56
AC018558.1-201ENST00000562591 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
AC018558.1-201ENST00000562591 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.56
AC018558.1-201ENST00000562591 TOP2AP11388 1531 aaKnown RBP11.47□□□□□ -0.57
AC018558.1-201ENST00000562591 SENP3Q9H4L4 574 aaPredicted RBP11.47□□□□□ -0.57
AC018558.1-201ENST00000562591 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.57
AC018558.1-201ENST00000562591 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
AC018558.1-201ENST00000562591 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
AC018558.1-201ENST00000562591 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
AC018558.1-201ENST00000562591 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
AC018558.1-201ENST00000562591 ZNF608Q9ULD9 1512 aaPredicted RBP11.34□□□□□ -0.59
AC018558.1-201ENST00000562591 PHF23Q9BUL5 403 aaPredicted RBP11.33□□□□□ -0.6
AC018558.1-201ENST00000562591 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
AC018558.1-201ENST00000562591 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
AC018558.1-201ENST00000562591 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
AC018558.1-201ENST00000562591 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
AC018558.1-201ENST00000562591 ARHGEF11O15085 1522 aa11.28□□□□□ -0.6
AC018558.1-201ENST00000562591 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
AC018558.1-201ENST00000562591 CYB5RLQ6IPT4 315 aa11.25□□□□□ -0.61
AC018558.1-201ENST00000562591 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.61
AC018558.1-201ENST00000562591 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
AC018558.1-201ENST00000562591 TARBP1Q13395 1621 aaKnown RBP11.23□□□□□ -0.61
AC018558.1-201ENST00000562591 POLA1P09884 1462 aaPredicted RBP11.2□□□□□ -0.62
AC018558.1-201ENST00000562591 FBLN2P98095 1184 aa11.19□□□□□ -0.62
AC018558.1-201ENST00000562591 SOGA1O94964 1423 aa11.18□□□□□ -0.62
AC018558.1-201ENST00000562591 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
AC018558.1-201ENST00000562591 TDRD9Q8NDG6 1382 aaKnown RBP11.16□□□□□ -0.62
AC018558.1-201ENST00000562591 CHD1O14646 1710 aa11.15□□□□□ -0.62
AC018558.1-201ENST00000562591 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.62
AC018558.1-201ENST00000562591 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
AC018558.1-201ENST00000562591 CHMP7Q8WUX9 453 aaPredicted RBP11.13□□□□□ -0.63
AC018558.1-201ENST00000562591 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
AC018558.1-201ENST00000562591 SNAPC4Q5SXM2 1469 aa11.1□□□□□ -0.63
AC018558.1-201ENST00000562591 FGD5Q6ZNL6 1462 aa11.1□□□□□ -0.63
AC018558.1-201ENST00000562591 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
AC018558.1-201ENST00000562591 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
AC018558.1-201ENST00000562591 GRIN2BQ13224 1484 aa11.08□□□□□ -0.64
AC018558.1-201ENST00000562591 CUX1P39880 1505 aa11.07□□□□□ -0.64
AC018558.1-201ENST00000562591 SYNJ1O43426 1573 aa11.07□□□□□ -0.64
AC018558.1-201ENST00000562591 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
AC018558.1-201ENST00000562591 GAPVD1Q14C86 1478 aa11.02□□□□□ -0.65
AC018558.1-201ENST00000562591 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
AC018558.1-201ENST00000562591 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
AC018558.1-201ENST00000562591 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
AC018558.1-201ENST00000562591 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
AC018558.1-201ENST00000562591 GRIN2AQ12879 1464 aa10.93□□□□□ -0.66
AC018558.1-201ENST00000562591 NUP160Q12769 1436 aa10.92□□□□□ -0.66
AC018558.1-201ENST00000562591 SUPT5HO00267 1087 aaKnown RBP10.89□□□□□ -0.67
AC018558.1-201ENST00000562591 FHAD1B1AJZ9 1412 aa10.89□□□□□ -0.67
AC018558.1-201ENST00000562591 ADAMTS12P58397 1594 aa10.87□□□□□ -0.67
AC018558.1-201ENST00000562591 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
AC018558.1-201ENST00000562591 ERCC6L2Q5T890 1561 aa10.87□□□□□ -0.67
AC018558.1-201ENST00000562591 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
AC018558.1-201ENST00000562591 ERICH3Q5RHP9 1530 aa10.85□□□□□ -0.67
AC018558.1-201ENST00000562591 SHROOM2Q13796 1616 aa10.85□□□□□ -0.67
AC018558.1-201ENST00000562591 BIVM-ERCC5R4GMW8 1640 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms