RNA–Protein interactions for RNA: ENST00000562408.1

XPO6-203, Transcript of exportin 6, humanhuman

TSL 5

Gene XPO6, Length 709 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO6-203ENST00000562408 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
XPO6-203ENST00000562408 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
XPO6-203ENST00000562408 ABCC9O60706 1549 aa23.64■■□□□ 1.37
XPO6-203ENST00000562408 CCDC180Q9P1Z9 1646 aa23.58■■□□□ 1.36
XPO6-203ENST00000562408 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
XPO6-203ENST00000562408 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
XPO6-203ENST00000562408 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
XPO6-203ENST00000562408 NACADO15069 1562 aa22.25■■□□□ 1.15
XPO6-203ENST00000562408 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
XPO6-203ENST00000562408 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
XPO6-203ENST00000562408 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.094e-7■■□□□ 14.5
XPO6-203ENST00000562408 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
XPO6-203ENST00000562408 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
XPO6-203ENST00000562408 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.03
XPO6-203ENST00000562408 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
XPO6-203ENST00000562408 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
XPO6-203ENST00000562408 CC2D2AQ9P2K1 1620 aa21.42■■□□□ 1.02
XPO6-203ENST00000562408 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
XPO6-203ENST00000562408 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
XPO6-203ENST00000562408 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
XPO6-203ENST00000562408 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
XPO6-203ENST00000562408 DNAJC5Q9H3Z4 198 aa20.66■□□□□ 0.9
XPO6-203ENST00000562408 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
XPO6-203ENST00000562408 CUX2O14529 1486 aa20.5■□□□□ 0.87
XPO6-203ENST00000562408 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
XPO6-203ENST00000562408 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
XPO6-203ENST00000562408 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
XPO6-203ENST00000562408 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
XPO6-203ENST00000562408 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
XPO6-203ENST00000562408 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
XPO6-203ENST00000562408 NESP48681 1621 aa20.26■□□□□ 0.83
XPO6-203ENST00000562408 BAZ1AQ9NRL2 1556 aaPredicted RBP20.22■□□□□ 0.83
XPO6-203ENST00000562408 THOC2Q8NI27 1593 aaKnown RBP20.2■□□□□ 0.82
XPO6-203ENST00000562408 PEG3Q9GZU2 1588 aa20.2■□□□□ 0.82
XPO6-203ENST00000562408 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
XPO6-203ENST00000562408 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
XPO6-203ENST00000562408 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
XPO6-203ENST00000562408 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
XPO6-203ENST00000562408 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
XPO6-203ENST00000562408 WIZO95785 1651 aa19.85■□□□□ 0.77
XPO6-203ENST00000562408 WDR62O43379 1518 aa19.81■□□□□ 0.76
XPO6-203ENST00000562408 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
XPO6-203ENST00000562408 CADPSQ9ULU8 1353 aa19.81■□□□□ 0.76
XPO6-203ENST00000562408 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
XPO6-203ENST00000562408 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
XPO6-203ENST00000562408 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
XPO6-203ENST00000562408 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
XPO6-203ENST00000562408 CFTRP13569 1480 aa19.57■□□□□ 0.72
XPO6-203ENST00000562408 TOP2AP11388 1531 aaKnown RBP19.55■□□□□ 0.72
XPO6-203ENST00000562408 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
XPO6-203ENST00000562408 RSF1Q96T23 1441 aaPredicted RBP19.48■□□□□ 0.71
XPO6-203ENST00000562408 FOXD1Q16676 465 aa19.47■□□□□ 0.71
XPO6-203ENST00000562408 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
XPO6-203ENST00000562408 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
XPO6-203ENST00000562408 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
XPO6-203ENST00000562408 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
XPO6-203ENST00000562408 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
XPO6-203ENST00000562408 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
XPO6-203ENST00000562408 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
XPO6-203ENST00000562408 EIF4G3O43432 1585 aaKnown RBP19.26■□□□□ 0.67
XPO6-203ENST00000562408 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
XPO6-203ENST00000562408 CHD1O14646 1710 aa19.24■□□□□ 0.67
XPO6-203ENST00000562408 ARHGEF11O15085 1522 aa19.22■□□□□ 0.67
XPO6-203ENST00000562408 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
XPO6-203ENST00000562408 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
XPO6-203ENST00000562408 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
XPO6-203ENST00000562408 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.64
XPO6-203ENST00000562408 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
XPO6-203ENST00000562408 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
XPO6-203ENST00000562408 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
XPO6-203ENST00000562408 CYB5RLQ6IPT4 315 aa18.96■□□□□ 0.63
XPO6-203ENST00000562408 RAD54L2Q9Y4B4 1467 aa18.94■□□□□ 0.62
XPO6-203ENST00000562408 CLASP1Q7Z460 1538 aa18.91■□□□□ 0.62
XPO6-203ENST00000562408 FBLN2P98095 1184 aa18.9■□□□□ 0.62
XPO6-203ENST00000562408 SOGA1O94964 1423 aa18.89■□□□□ 0.61
XPO6-203ENST00000562408 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
XPO6-203ENST00000562408 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.61
XPO6-203ENST00000562408 PBRM1Q86U86 1689 aa18.88■□□□□ 0.61
XPO6-203ENST00000562408 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
XPO6-203ENST00000562408 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
XPO6-203ENST00000562408 CUX1P39880 1505 aa18.84■□□□□ 0.61
XPO6-203ENST00000562408 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
XPO6-203ENST00000562408 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
XPO6-203ENST00000562408 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
XPO6-203ENST00000562408 SYNJ2O15056 1496 aa18.77■□□□□ 0.59
XPO6-203ENST00000562408 ABCA5Q8WWZ7 1642 aa18.74■□□□□ 0.59
XPO6-203ENST00000562408 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
XPO6-203ENST00000562408 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
XPO6-203ENST00000562408 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
XPO6-203ENST00000562408 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
XPO6-203ENST00000562408 ERCC6L2Q5T890 1561 aa18.58■□□□□ 0.56
XPO6-203ENST00000562408 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
XPO6-203ENST00000562408 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
XPO6-203ENST00000562408 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
XPO6-203ENST00000562408 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
XPO6-203ENST00000562408 SHROOM2Q13796 1616 aa18.55■□□□□ 0.56
XPO6-203ENST00000562408 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
XPO6-203ENST00000562408 KIF13AQ9H1H9 1805 aa18.51■□□□□ 0.55
XPO6-203ENST00000562408 NUP160Q12769 1436 aa18.5■□□□□ 0.55
XPO6-203ENST00000562408 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms