RNA–Protein interactions for RNA: ENST00000562224.1

HSDL1-203, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

TSL 4

Gene HSDL1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-203ENST00000562224 NISCHQ9Y2I1 1504 aa40.4■■■■■ 4.06
HSDL1-203ENST00000562224 ABCC9O60706 1549 aa37.06■■■■□ 3.52
HSDL1-203ENST00000562224 CCDC180Q9P1Z9 1646 aa36.58■■■■□ 3.45
HSDL1-203ENST00000562224 DNAJC5BQ9UF47 199 aa35.37■■■■□ 3.25
HSDL1-203ENST00000562224 RB1CC1Q8TDY2 1594 aa35.1■■■■□ 3.21
HSDL1-203ENST00000562224 NACADO15069 1562 aa34.74■■■■□ 3.15
HSDL1-203ENST00000562224 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
HSDL1-203ENST00000562224 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
HSDL1-203ENST00000562224 MYO15BQ96JP2 1530 aa34.17■■■■□ 3.06
HSDL1-203ENST00000562224 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
HSDL1-203ENST00000562224 BICRAQ9NZM4 1560 aa34.1■■■■□ 3.05
HSDL1-203ENST00000562224 SHROOM4Q9ULL8 1493 aa33.75■■■□□ 2.99
HSDL1-203ENST00000562224 CECR2Q9BXF3 1484 aa33.53■■■□□ 2.96
HSDL1-203ENST00000562224 CC2D2AQ9P2K1 1620 aa33.5■■■□□ 2.95
HSDL1-203ENST00000562224 DCAF1Q9Y4B6 1507 aa33.45■■■□□ 2.95
HSDL1-203ENST00000562224 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
HSDL1-203ENST00000562224 EIF4G1Q04637 1599 aaKnown RBP33.31■■■□□ 2.92
HSDL1-203ENST00000562224 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
HSDL1-203ENST00000562224 DNAJC5Q9H3Z4 198 aa33.05■■■□□ 2.88
HSDL1-203ENST00000562224 CUX2O14529 1486 aa32.37■■■□□ 2.77
HSDL1-203ENST00000562224 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
HSDL1-203ENST00000562224 ERCC6Q03468 1493 aa32.07■■■□□ 2.72
HSDL1-203ENST00000562224 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
HSDL1-203ENST00000562224 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
HSDL1-203ENST00000562224 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
HSDL1-203ENST00000562224 NESP48681 1621 aa31.65■■■□□ 2.66
HSDL1-203ENST00000562224 SMARCA4P51532 1647 aa31.63■■■□□ 2.65
HSDL1-203ENST00000562224 THOC2Q8NI27 1593 aaKnown RBP31.56■■■□□ 2.64
HSDL1-203ENST00000562224 BAZ1BQ9UIG0 1483 aaKnown RBP31.47■■■□□ 2.63
HSDL1-203ENST00000562224 LAMC3Q9Y6N6 1575 aa31.45■■■□□ 2.63
HSDL1-203ENST00000562224 PEG3Q9GZU2 1588 aa31.44■■■□□ 2.62
HSDL1-203ENST00000562224 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
HSDL1-203ENST00000562224 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
HSDL1-203ENST00000562224 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
HSDL1-203ENST00000562224 TRIM41Q8WV44 630 aa31.13■■■□□ 2.57
HSDL1-203ENST00000562224 MROH2BQ7Z745 1585 aa31.06■■■□□ 2.56
HSDL1-203ENST00000562224 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
HSDL1-203ENST00000562224 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
HSDL1-203ENST00000562224 WDR62O43379 1518 aa31.01■■■□□ 2.55
HSDL1-203ENST00000562224 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.51
HSDL1-203ENST00000562224 OSCARQ8IYS5 282 aa30.69■■■□□ 2.5
HSDL1-203ENST00000562224 FANCD2Q9BXW9 1451 aa30.65■■■□□ 2.5
HSDL1-203ENST00000562224 WIZO95785 1651 aa30.6■■■□□ 2.49
HSDL1-203ENST00000562224 CFTRP13569 1480 aa30.58■■■□□ 2.49
HSDL1-203ENST00000562224 URB2Q14146 1524 aaKnown RBP30.44■■■□□ 2.46
HSDL1-203ENST00000562224 RIMBP3CA6NJZ7 1639 aa30.35■■■□□ 2.45
HSDL1-203ENST00000562224 RIMBP3BA6NNM3 1639 aa30.35■■■□□ 2.45
HSDL1-203ENST00000562224 RIMBP3Q9UFD9 1639 aa30.35■■■□□ 2.45
HSDL1-203ENST00000562224 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
HSDL1-203ENST00000562224 ARHGEF11O15085 1522 aa30.22■■■□□ 2.43
HSDL1-203ENST00000562224 RSF1Q96T23 1441 aaPredicted RBP30.21■■■□□ 2.43
HSDL1-203ENST00000562224 IFT140Q96RY7 1462 aa30.2■■■□□ 2.43
HSDL1-203ENST00000562224 PRDM2Q13029 1718 aa30.15■■■□□ 2.42
HSDL1-203ENST00000562224 ZNF608Q9ULD9 1512 aaPredicted RBP30.14■■■□□ 2.42
HSDL1-203ENST00000562224 TOPBP1Q92547 1522 aa30.01■■■□□ 2.39
HSDL1-203ENST00000562224 EIF4G3O43432 1585 aaKnown RBP29.97■■■□□ 2.39
HSDL1-203ENST00000562224 ABCC8Q09428 1581 aa29.97■■■□□ 2.39
HSDL1-203ENST00000562224 CYB5RLQ6IPT4 315 aa29.94■■■□□ 2.38
HSDL1-203ENST00000562224 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
HSDL1-203ENST00000562224 ARAP1Q96P48 1450 aa29.87■■■□□ 2.37
HSDL1-203ENST00000562224 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
HSDL1-203ENST00000562224 CHD1O14646 1710 aa29.81■■■□□ 2.36
HSDL1-203ENST00000562224 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
HSDL1-203ENST00000562224 AQRO60306 1485 aaKnown RBP eCLIP29.78■■■□□ 2.36
HSDL1-203ENST00000562224 TRHP20396 242 aaPredicted RBP29.77■■■□□ 2.36
HSDL1-203ENST00000562224 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
HSDL1-203ENST00000562224 FBLN2P98095 1184 aa29.61■■■□□ 2.33
HSDL1-203ENST00000562224 CLASP1Q7Z460 1538 aa29.57■■■□□ 2.32
HSDL1-203ENST00000562224 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
HSDL1-203ENST00000562224 RAD54L2Q9Y4B4 1467 aa29.49■■■□□ 2.31
HSDL1-203ENST00000562224 SOGA1O94964 1423 aa29.48■■■□□ 2.31
HSDL1-203ENST00000562224 TDRD9Q8NDG6 1382 aaKnown RBP29.48■■■□□ 2.31
HSDL1-203ENST00000562224 SNAPC4Q5SXM2 1469 aa29.47■■■□□ 2.31
HSDL1-203ENST00000562224 SYNJ1O43426 1573 aa29.46■■■□□ 2.31
HSDL1-203ENST00000562224 MAGI1Q96QZ7 1491 aaPredicted RBP29.45■■■□□ 2.31
HSDL1-203ENST00000562224 AEBP2Q6ZN18 517 aaPredicted RBP29.41■■■□□ 2.3
HSDL1-203ENST00000562224 CHMP7Q8WUX9 453 aaPredicted RBP29.38■■■□□ 2.29
HSDL1-203ENST00000562224 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
HSDL1-203ENST00000562224 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
HSDL1-203ENST00000562224 GRIN2BQ13224 1484 aa29.35■■■□□ 2.29
HSDL1-203ENST00000562224 GAPVD1Q14C86 1478 aa29.26■■■□□ 2.27
HSDL1-203ENST00000562224 CUX1P39880 1505 aa29.22■■■□□ 2.27
HSDL1-203ENST00000562224 PBRM1Q86U86 1689 aa29.11■■■□□ 2.25
HSDL1-203ENST00000562224 ABCA10Q8WWZ4 1543 aa29.05■■■□□ 2.24
HSDL1-203ENST00000562224 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
HSDL1-203ENST00000562224 GRIN2AQ12879 1464 aa28.97■■■□□ 2.23
HSDL1-203ENST00000562224 ERCC6L2Q5T890 1561 aa28.96■■■□□ 2.23
HSDL1-203ENST00000562224 NUP160Q12769 1436 aa28.94■■■□□ 2.22
HSDL1-203ENST00000562224 CEP170Q5SW79 1584 aa28.91■■■□□ 2.22
HSDL1-203ENST00000562224 SHROOM2Q13796 1616 aa28.88■■■□□ 2.21
HSDL1-203ENST00000562224 ADAMTS12P58397 1594 aa28.85■■■□□ 2.21
HSDL1-203ENST00000562224 KIF13AQ9H1H9 1805 aa28.78■■■□□ 2.2
HSDL1-203ENST00000562224 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
HSDL1-203ENST00000562224 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
HSDL1-203ENST00000562224 ERICH3Q5RHP9 1530 aa28.69■■■□□ 2.18
HSDL1-203ENST00000562224 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
HSDL1-203ENST00000562224 ABCC10Q5T3U5 1492 aa28.62■■■□□ 2.17
HSDL1-203ENST00000562224 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
HSDL1-203ENST00000562224 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
HSDL1-203ENST00000562224 MAPKBP1O60336 1514 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms