RNA–Protein interactions for RNA: ENST00000562200.5

COG4-209, Transcript of component of oligomeric golgi complex 4, humanhuman

TSL 2

Gene COG4, Length 885 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-209ENST00000562200 NISCHQ9Y2I1 1504 aa37.06■■■■□ 3.52
COG4-209ENST00000562200 ABCC9O60706 1549 aa34.62■■■■□ 3.13
COG4-209ENST00000562200 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
COG4-209ENST00000562200 DNAJC5BQ9UF47 199 aa33.35■■■□□ 2.93
COG4-209ENST00000562200 RB1CC1Q8TDY2 1594 aa32.49■■■□□ 2.79
COG4-209ENST00000562200 PABPN1Q86U42 306 aaKnown RBP eCLIP32.19■■■□□ 2.74
COG4-209ENST00000562200 NACADO15069 1562 aa32.05■■■□□ 2.72
COG4-209ENST00000562200 DCAF8L2P0C7V8 631 aa31.99■■■□□ 2.71
COG4-209ENST00000562200 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
COG4-209ENST00000562200 BICRAQ9NZM4 1560 aa31.51■■■□□ 2.63
COG4-209ENST00000562200 DNAJC5Q9H3Z4 198 aa31.37■■■□□ 2.61
COG4-209ENST00000562200 CECR2Q9BXF3 1484 aa31.29■■■□□ 2.6
COG4-209ENST00000562200 MYO15BQ96JP2 1530 aa31.27■■■□□ 2.6
COG4-209ENST00000562200 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
COG4-209ENST00000562200 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
COG4-209ENST00000562200 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
COG4-209ENST00000562200 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
COG4-209ENST00000562200 DCAF1Q9Y4B6 1507 aa30.52■■■□□ 2.48
COG4-209ENST00000562200 ZCCHC6Q5VYS8 1495 aaKnown RBP30.45■■■□□ 2.47
COG4-209ENST00000562200 CUX2O14529 1486 aa30.19■■■□□ 2.42
COG4-209ENST00000562200 ERCC6Q03468 1493 aa30■■■□□ 2.39
COG4-209ENST00000562200 TRIM41Q8WV44 630 aa29.66■■■□□ 2.34
COG4-209ENST00000562200 NCAPD3P42695 1498 aa29.64■■■□□ 2.34
COG4-209ENST00000562200 NESP48681 1621 aa29.44■■■□□ 2.3
COG4-209ENST00000562200 ATAD2BQ9ULI0 1458 aa29.39■■■□□ 2.3
COG4-209ENST00000562200 SMARCA2P51531 1590 aa29.26■■■□□ 2.27
COG4-209ENST00000562200 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
COG4-209ENST00000562200 THOC2Q8NI27 1593 aaKnown RBP29.22■■■□□ 2.27
COG4-209ENST00000562200 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
COG4-209ENST00000562200 SMARCA4P51532 1647 aa29.06■■■□□ 2.24
COG4-209ENST00000562200 LAMC3Q9Y6N6 1575 aa29.06■■■□□ 2.24
COG4-209ENST00000562200 PDS5BQ9NTI5 1447 aa29.04■■■□□ 2.24
COG4-209ENST00000562200 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
COG4-209ENST00000562200 OSCARQ8IYS5 282 aa28.84■■■□□ 2.21
COG4-209ENST00000562200 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
COG4-209ENST00000562200 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
COG4-209ENST00000562200 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.19
COG4-209ENST00000562200 CADPSQ9ULU8 1353 aa28.74■■■□□ 2.19
COG4-209ENST00000562200 WDR62O43379 1518 aa28.66■■■□□ 2.18
COG4-209ENST00000562200 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
COG4-209ENST00000562200 CEP164Q9UPV0 1460 aa28.47■■■□□ 2.15
COG4-209ENST00000562200 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
COG4-209ENST00000562200 RIMBP3CA6NJZ7 1639 aa28.34■■■□□ 2.13
COG4-209ENST00000562200 RIMBP3BA6NNM3 1639 aa28.34■■■□□ 2.13
COG4-209ENST00000562200 RIMBP3Q9UFD9 1639 aa28.34■■■□□ 2.13
COG4-209ENST00000562200 TRHP20396 242 aaPredicted RBP28.26■■■□□ 2.11
COG4-209ENST00000562200 CYB5RLQ6IPT4 315 aa28.23■■■□□ 2.11
COG4-209ENST00000562200 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
COG4-209ENST00000562200 AEBP2Q6ZN18 517 aaPredicted RBP28.16■■■□□ 2.1
COG4-209ENST00000562200 CFTRP13569 1480 aa28.15■■■□□ 2.1
COG4-209ENST00000562200 URB2Q14146 1524 aaKnown RBP28.14■■■□□ 2.1
COG4-209ENST00000562200 WIZO95785 1651 aa28.12■■■□□ 2.09
COG4-209ENST00000562200 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
COG4-209ENST00000562200 IFT140Q96RY7 1462 aa27.95■■■□□ 2.07
COG4-209ENST00000562200 ARAP1Q96P48 1450 aa27.83■■■□□ 2.04
COG4-209ENST00000562200 FBLN2P98095 1184 aa27.82■■■□□ 2.04
COG4-209ENST00000562200 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
COG4-209ENST00000562200 TOP2AP11388 1531 aaKnown RBP27.71■■■□□ 2.03
COG4-209ENST00000562200 TOPBP1Q92547 1522 aa27.7■■■□□ 2.02
COG4-209ENST00000562200 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
COG4-209ENST00000562200 AQRO60306 1485 aaKnown RBP eCLIP27.67■■■□□ 2.024e-6■■■■■ 31
COG4-209ENST00000562200 CHD1O14646 1710 aa27.65■■■□□ 2.02
COG4-209ENST00000562200 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
COG4-209ENST00000562200 PRDM2Q13029 1718 aa27.62■■■□□ 2.01
COG4-209ENST00000562200 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
COG4-209ENST00000562200 CCDC88BA6NC98 1476 aa27.47■■□□□ 1.99
COG4-209ENST00000562200 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
COG4-209ENST00000562200 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
COG4-209ENST00000562200 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
COG4-209ENST00000562200 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
COG4-209ENST00000562200 CLASP1Q7Z460 1538 aa27.33■■□□□ 1.97
COG4-209ENST00000562200 SOGA1O94964 1423 aa27.32■■□□□ 1.96
COG4-209ENST00000562200 RAD54L2Q9Y4B4 1467 aa27.31■■□□□ 1.96
COG4-209ENST00000562200 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
COG4-209ENST00000562200 SNAPC4Q5SXM2 1469 aa27.3■■□□□ 1.96
COG4-209ENST00000562200 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
COG4-209ENST00000562200 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
COG4-209ENST00000562200 SYNJ2O15056 1496 aa27.13■■□□□ 1.93
COG4-209ENST00000562200 GRIN2BQ13224 1484 aa27.13■■□□□ 1.93
COG4-209ENST00000562200 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
COG4-209ENST00000562200 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
COG4-209ENST00000562200 ILDR1Q86SU0 546 aaPredicted RBP26.95■■□□□ 1.9
COG4-209ENST00000562200 ERCC6L2Q5T890 1561 aa26.86■■□□□ 1.89
COG4-209ENST00000562200 CUX1P39880 1505 aa26.85■■□□□ 1.89
COG4-209ENST00000562200 PBRM1Q86U86 1689 aa26.82■■□□□ 1.88
COG4-209ENST00000562200 FAM69CQ0P6D2 419 aa26.77■■□□□ 1.88
COG4-209ENST00000562200 KDM4FA0A1W2PPD8 638 aa26.76■■□□□ 1.87
COG4-209ENST00000562200 CEP170Q5SW79 1584 aa26.75■■□□□ 1.87
COG4-209ENST00000562200 KIF13AQ9H1H9 1805 aa26.75■■□□□ 1.87
COG4-209ENST00000562200 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
COG4-209ENST00000562200 NPM1P06748 294 aaKnown RBP eCLIP26.71■■□□□ 1.87
COG4-209ENST00000562200 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
COG4-209ENST00000562200 NUP160Q12769 1436 aa26.68■■□□□ 1.86
COG4-209ENST00000562200 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
COG4-209ENST00000562200 ABCC10Q5T3U5 1492 aa26.61■■□□□ 1.85
COG4-209ENST00000562200 SHROOM2Q13796 1616 aa26.59■■□□□ 1.85
COG4-209ENST00000562200 PRG4Q92954 1404 aaPredicted RBP26.58■■□□□ 1.85
COG4-209ENST00000562200 JPH4Q96JJ6 628 aa26.57■■□□□ 1.84
COG4-209ENST00000562200 FHAD1B1AJZ9 1412 aa26.55■■□□□ 1.84
COG4-209ENST00000562200 ADAMTS12P58397 1594 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms