RNA–Protein interactions for RNA: ENST00000562040.1

AC135782.2-201, humanhuman

TSL 3 BASIC

Gene AC135782.2, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC135782.2-201ENST00000562040 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
AC135782.2-201ENST00000562040 CCDC180Q9P1Z9 1646 aa30.17■■■□□ 2.42
AC135782.2-201ENST00000562040 ABCC9O60706 1549 aa29.48■■■□□ 2.31
AC135782.2-201ENST00000562040 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
AC135782.2-201ENST00000562040 RB1CC1Q8TDY2 1594 aa28.41■■■□□ 2.14
AC135782.2-201ENST00000562040 NACADO15069 1562 aa28.38■■■□□ 2.13
AC135782.2-201ENST00000562040 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
AC135782.2-201ENST00000562040 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
AC135782.2-201ENST00000562040 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
AC135782.2-201ENST00000562040 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
AC135782.2-201ENST00000562040 PABPN1Q86U42 306 aaKnown RBP eCLIP27.57■■■□□ 2
AC135782.2-201ENST00000562040 SCRIBQ14160 1630 aa27.53■■■□□ 2
AC135782.2-201ENST00000562040 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
AC135782.2-201ENST00000562040 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
AC135782.2-201ENST00000562040 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
AC135782.2-201ENST00000562040 EIF4G1Q04637 1599 aaKnown RBP26.79■■□□□ 1.88
AC135782.2-201ENST00000562040 CC2D2AQ9P2K1 1620 aa26.67■■□□□ 1.86
AC135782.2-201ENST00000562040 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
AC135782.2-201ENST00000562040 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
AC135782.2-201ENST00000562040 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
AC135782.2-201ENST00000562040 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
AC135782.2-201ENST00000562040 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
AC135782.2-201ENST00000562040 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
AC135782.2-201ENST00000562040 MROH2BQ7Z745 1585 aa26.14■■□□□ 1.78
AC135782.2-201ENST00000562040 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
AC135782.2-201ENST00000562040 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
AC135782.2-201ENST00000562040 BAZ1BQ9UIG0 1483 aaKnown RBP25.99■■□□□ 1.75
AC135782.2-201ENST00000562040 WIZO95785 1651 aa25.87■■□□□ 1.73
AC135782.2-201ENST00000562040 RSF1Q96T23 1441 aaPredicted RBP25.87■■□□□ 1.73
AC135782.2-201ENST00000562040 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
AC135782.2-201ENST00000562040 NESP48681 1621 aa25.5■■□□□ 1.67
AC135782.2-201ENST00000562040 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
AC135782.2-201ENST00000562040 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
AC135782.2-201ENST00000562040 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
AC135782.2-201ENST00000562040 PDS5BQ9NTI5 1447 aa25.35■■□□□ 1.65
AC135782.2-201ENST00000562040 SUPT5HO00267 1087 aaKnown RBP25.31■■□□□ 1.64
AC135782.2-201ENST00000562040 CCDC88BA6NC98 1476 aa25.31■■□□□ 1.64
AC135782.2-201ENST00000562040 CFTRP13569 1480 aa25.26■■□□□ 1.63
AC135782.2-201ENST00000562040 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
AC135782.2-201ENST00000562040 CUX2O14529 1486 aa25.15■■□□□ 1.62
AC135782.2-201ENST00000562040 FANCD2Q9BXW9 1451 aa25.13■■□□□ 1.61
AC135782.2-201ENST00000562040 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
AC135782.2-201ENST00000562040 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
AC135782.2-201ENST00000562040 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
AC135782.2-201ENST00000562040 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
AC135782.2-201ENST00000562040 WDR62O43379 1518 aa24.95■■□□□ 1.58
AC135782.2-201ENST00000562040 URB2Q14146 1524 aaKnown RBP24.84■■□□□ 1.57
AC135782.2-201ENST00000562040 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
AC135782.2-201ENST00000562040 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
AC135782.2-201ENST00000562040 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
AC135782.2-201ENST00000562040 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
AC135782.2-201ENST00000562040 CUX1P39880 1505 aa24.53■■□□□ 1.52
AC135782.2-201ENST00000562040 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
AC135782.2-201ENST00000562040 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.51
AC135782.2-201ENST00000562040 SOGA1O94964 1423 aa24.44■■□□□ 1.5
AC135782.2-201ENST00000562040 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
AC135782.2-201ENST00000562040 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
AC135782.2-201ENST00000562040 ZNF608Q9ULD9 1512 aaPredicted RBP24.42■■□□□ 1.5
AC135782.2-201ENST00000562040 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
AC135782.2-201ENST00000562040 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
AC135782.2-201ENST00000562040 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
AC135782.2-201ENST00000562040 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.49
AC135782.2-201ENST00000562040 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
AC135782.2-201ENST00000562040 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
AC135782.2-201ENST00000562040 AQRO60306 1485 aaKnown RBP eCLIP24.31■■□□□ 1.48
AC135782.2-201ENST00000562040 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
AC135782.2-201ENST00000562040 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
AC135782.2-201ENST00000562040 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
AC135782.2-201ENST00000562040 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
AC135782.2-201ENST00000562040 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
AC135782.2-201ENST00000562040 GRIN2BQ13224 1484 aa24.14■■□□□ 1.46
AC135782.2-201ENST00000562040 ABCA5Q8WWZ7 1642 aa24.11■■□□□ 1.45
AC135782.2-201ENST00000562040 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.45
AC135782.2-201ENST00000562040 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
AC135782.2-201ENST00000562040 FBLN2P98095 1184 aa24.08■■□□□ 1.45
AC135782.2-201ENST00000562040 PBRM1Q86U86 1689 aa24.08■■□□□ 1.44
AC135782.2-201ENST00000562040 CHD1O14646 1710 aa24.03■■□□□ 1.44
AC135782.2-201ENST00000562040 CHMP7Q8WUX9 453 aaPredicted RBP24.02■■□□□ 1.44
AC135782.2-201ENST00000562040 SYNJ2O15056 1496 aa23.98■■□□□ 1.43
AC135782.2-201ENST00000562040 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
AC135782.2-201ENST00000562040 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
AC135782.2-201ENST00000562040 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
AC135782.2-201ENST00000562040 ADAMTS12P58397 1594 aa23.88■■□□□ 1.41
AC135782.2-201ENST00000562040 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
AC135782.2-201ENST00000562040 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
AC135782.2-201ENST00000562040 IGF1RP08069 1367 aa23.79■■□□□ 1.4
AC135782.2-201ENST00000562040 CLASP1Q7Z460 1538 aa23.75■■□□□ 1.39
AC135782.2-201ENST00000562040 CUL7Q14999 1698 aa23.75■■□□□ 1.39
AC135782.2-201ENST00000562040 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
AC135782.2-201ENST00000562040 NUP160Q12769 1436 aa23.7■■□□□ 1.38
AC135782.2-201ENST00000562040 RIMBP3CA6NJZ7 1639 aa23.7■■□□□ 1.38
AC135782.2-201ENST00000562040 RIMBP3BA6NNM3 1639 aa23.7■■□□□ 1.38
AC135782.2-201ENST00000562040 RIMBP3Q9UFD9 1639 aa23.7■■□□□ 1.38
AC135782.2-201ENST00000562040 CARMIL1Q5VZK9 1371 aa23.68■■□□□ 1.38
AC135782.2-201ENST00000562040 CEP170Q5SW79 1584 aa23.68■■□□□ 1.38
AC135782.2-201ENST00000562040 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
AC135782.2-201ENST00000562040 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
AC135782.2-201ENST00000562040 RAPGEF2Q9Y4G8 1499 aa23.54■■□□□ 1.36
AC135782.2-201ENST00000562040 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
AC135782.2-201ENST00000562040 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms