RNA–Protein interactions for RNA: ENST00000561990.3

AC140658.4-201, humanhuman

BASIC

Gene AC140658.4, Length 352 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC140658.4-201ENST00000561990 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
AC140658.4-201ENST00000561990 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
AC140658.4-201ENST00000561990 AEBP2Q6ZN18 517 aaPredicted RBP29.15■■■□□ 2.26
AC140658.4-201ENST00000561990 CHIC1Q5VXU3 224 aa28.71■■■□□ 2.19
AC140658.4-201ENST00000561990 ABCC9O60706 1549 aa28.42■■■□□ 2.14
AC140658.4-201ENST00000561990 ZCCHC6Q5VYS8 1495 aaKnown RBP28.04■■■□□ 2.08
AC140658.4-201ENST00000561990 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
AC140658.4-201ENST00000561990 DCAF1Q9Y4B6 1507 aa27.84■■■□□ 2.05
AC140658.4-201ENST00000561990 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
AC140658.4-201ENST00000561990 NACADO15069 1562 aa27.77■■■□□ 2.04
AC140658.4-201ENST00000561990 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
AC140658.4-201ENST00000561990 SCRIBQ14160 1630 aa27.03■■□□□ 1.92
AC140658.4-201ENST00000561990 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
AC140658.4-201ENST00000561990 SHROOM4Q9ULL8 1493 aa26.86■■□□□ 1.89
AC140658.4-201ENST00000561990 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
AC140658.4-201ENST00000561990 BICRAQ9NZM4 1560 aa26.66■■□□□ 1.86
AC140658.4-201ENST00000561990 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
AC140658.4-201ENST00000561990 CECR2Q9BXF3 1484 aa26.02■■□□□ 1.76
AC140658.4-201ENST00000561990 EIF4G1Q04637 1599 aaKnown RBP25.98■■□□□ 1.75
AC140658.4-201ENST00000561990 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
AC140658.4-201ENST00000561990 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.73
AC140658.4-201ENST00000561990 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
AC140658.4-201ENST00000561990 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
AC140658.4-201ENST00000561990 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
AC140658.4-201ENST00000561990 PEG3Q9GZU2 1588 aa25.66■■□□□ 1.7
AC140658.4-201ENST00000561990 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
AC140658.4-201ENST00000561990 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
AC140658.4-201ENST00000561990 WIZO95785 1651 aa25.61■■□□□ 1.69
AC140658.4-201ENST00000561990 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
AC140658.4-201ENST00000561990 BAZ1BQ9UIG0 1483 aaKnown RBP25.53■■□□□ 1.68
AC140658.4-201ENST00000561990 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
AC140658.4-201ENST00000561990 DNAJC5BQ9UF47 199 aa25.5■■□□□ 1.67
AC140658.4-201ENST00000561990 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
AC140658.4-201ENST00000561990 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
AC140658.4-201ENST00000561990 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
AC140658.4-201ENST00000561990 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
AC140658.4-201ENST00000561990 LAMC3Q9Y6N6 1575 aa24.85■■□□□ 1.57
AC140658.4-201ENST00000561990 CFTRP13569 1480 aa24.82■■□□□ 1.56
AC140658.4-201ENST00000561990 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
AC140658.4-201ENST00000561990 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
AC140658.4-201ENST00000561990 NESP48681 1621 aa24.7■■□□□ 1.54
AC140658.4-201ENST00000561990 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
AC140658.4-201ENST00000561990 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.52
AC140658.4-201ENST00000561990 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
AC140658.4-201ENST00000561990 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
AC140658.4-201ENST00000561990 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
AC140658.4-201ENST00000561990 ABCC8Q09428 1581 aa24.41■■□□□ 1.5
AC140658.4-201ENST00000561990 MRC2Q9UBG0 1479 aa24.35■■□□□ 1.49
AC140658.4-201ENST00000561990 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
AC140658.4-201ENST00000561990 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
AC140658.4-201ENST00000561990 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
AC140658.4-201ENST00000561990 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
AC140658.4-201ENST00000561990 TOPBP1Q92547 1522 aa24.23■■□□□ 1.47
AC140658.4-201ENST00000561990 THOC2Q8NI27 1593 aaKnown RBP24.21■■□□□ 1.47
AC140658.4-201ENST00000561990 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
AC140658.4-201ENST00000561990 WDR62O43379 1518 aa24.2■■□□□ 1.47
AC140658.4-201ENST00000561990 CUX1P39880 1505 aa24.2■■□□□ 1.47
AC140658.4-201ENST00000561990 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
AC140658.4-201ENST00000561990 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
AC140658.4-201ENST00000561990 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
AC140658.4-201ENST00000561990 CUX2O14529 1486 aa24.07■■□□□ 1.44
AC140658.4-201ENST00000561990 SOGA1O94964 1423 aa24.04■■□□□ 1.44
AC140658.4-201ENST00000561990 POLA1P09884 1462 aaPredicted RBP24.04■■□□□ 1.44
AC140658.4-201ENST00000561990 IFT140Q96RY7 1462 aa24■■□□□ 1.43
AC140658.4-201ENST00000561990 RAD54L2Q9Y4B4 1467 aa23.92■■□□□ 1.42
AC140658.4-201ENST00000561990 ABCA10Q8WWZ4 1543 aa23.89■■□□□ 1.42
AC140658.4-201ENST00000561990 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
AC140658.4-201ENST00000561990 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
AC140658.4-201ENST00000561990 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
AC140658.4-201ENST00000561990 EEA1Q15075 1411 aa23.81■■□□□ 1.4
AC140658.4-201ENST00000561990 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
AC140658.4-201ENST00000561990 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
AC140658.4-201ENST00000561990 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
AC140658.4-201ENST00000561990 ZNF608Q9ULD9 1512 aaPredicted RBP23.72■■□□□ 1.39
AC140658.4-201ENST00000561990 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.38
AC140658.4-201ENST00000561990 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
AC140658.4-201ENST00000561990 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
AC140658.4-201ENST00000561990 FAM9AQ8IZU1 332 aaPredicted RBP23.68■■□□□ 1.38
AC140658.4-201ENST00000561990 CSRNP3Q8WYN3 585 aa23.68■■□□□ 1.38
AC140658.4-201ENST00000561990 ERICH3Q5RHP9 1530 aa23.65■■□□□ 1.38
AC140658.4-201ENST00000561990 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.37
AC140658.4-201ENST00000561990 PBRM1Q86U86 1689 aa23.64■■□□□ 1.37
AC140658.4-201ENST00000561990 IGF1RP08069 1367 aa23.61■■□□□ 1.37
AC140658.4-201ENST00000561990 CUL7Q14999 1698 aa23.57■■□□□ 1.36
AC140658.4-201ENST00000561990 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
AC140658.4-201ENST00000561990 CARMIL1Q5VZK9 1371 aa23.54■■□□□ 1.36
AC140658.4-201ENST00000561990 FHAD1B1AJZ9 1412 aa23.51■■□□□ 1.35
AC140658.4-201ENST00000561990 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
AC140658.4-201ENST00000561990 CHMP7Q8WUX9 453 aaPredicted RBP23.51■■□□□ 1.35
AC140658.4-201ENST00000561990 FBLN2P98095 1184 aa23.47■■□□□ 1.35
AC140658.4-201ENST00000561990 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
AC140658.4-201ENST00000561990 RAPGEF2Q9Y4G8 1499 aa23.45■■□□□ 1.34
AC140658.4-201ENST00000561990 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
AC140658.4-201ENST00000561990 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
AC140658.4-201ENST00000561990 KIF21BO75037 1637 aa23.41■■□□□ 1.34
AC140658.4-201ENST00000561990 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
AC140658.4-201ENST00000561990 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
AC140658.4-201ENST00000561990 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
AC140658.4-201ENST00000561990 GRIN2AQ12879 1464 aa23.34■■□□□ 1.33
AC140658.4-201ENST00000561990 CHD1O14646 1710 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms