RNA–Protein interactions for RNA: ENST00000561977.1

AC112236.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC112236.1, Length 1,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC112236.1-201ENST00000561977 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
AC112236.1-201ENST00000561977 CHIC1Q5VXU3 224 aa27.63■■■□□ 2.01
AC112236.1-201ENST00000561977 SENP3Q9H4L4 574 aaPredicted RBP24.65■■□□□ 1.54
AC112236.1-201ENST00000561977 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
AC112236.1-201ENST00000561977 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
AC112236.1-201ENST00000561977 FOXD1Q16676 465 aa23.01■■□□□ 1.27
AC112236.1-201ENST00000561977 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
AC112236.1-201ENST00000561977 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
AC112236.1-201ENST00000561977 ADRA2BP18089 450 aa21.52■■□□□ 1.04
AC112236.1-201ENST00000561977 PIAS4Q8N2W9 510 aaPredicted RBP21.45■■□□□ 1.02
AC112236.1-201ENST00000561977 MSH5O43196 834 aa21.44■■□□□ 1.02
AC112236.1-201ENST00000561977 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
AC112236.1-201ENST00000561977 POTEDQ86YR6 584 aa20.79■□□□□ 0.92
AC112236.1-201ENST00000561977 ABCC9O60706 1549 aa20.43■□□□□ 0.86
AC112236.1-201ENST00000561977 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
AC112236.1-201ENST00000561977 NACADO15069 1562 aa19.77■□□□□ 0.76
AC112236.1-201ENST00000561977 MAPK8IP2Q13387 824 aaPredicted RBP19.75■□□□□ 0.75
AC112236.1-201ENST00000561977 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
AC112236.1-201ENST00000561977 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
AC112236.1-201ENST00000561977 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
AC112236.1-201ENST00000561977 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
AC112236.1-201ENST00000561977 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
AC112236.1-201ENST00000561977 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
AC112236.1-201ENST00000561977 PPP4R3CPQ6ZMV5 832 aa19.38■□□□□ 0.69
AC112236.1-201ENST00000561977 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
AC112236.1-201ENST00000561977 SHROOM4Q9ULL8 1493 aa19.1■□□□□ 0.65
AC112236.1-201ENST00000561977 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
AC112236.1-201ENST00000561977 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
AC112236.1-201ENST00000561977 SCRIBQ14160 1630 aa19■□□□□ 0.63
AC112236.1-201ENST00000561977 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
AC112236.1-201ENST00000561977 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
AC112236.1-201ENST00000561977 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
AC112236.1-201ENST00000561977 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
AC112236.1-201ENST00000561977 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
AC112236.1-201ENST00000561977 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
AC112236.1-201ENST00000561977 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
AC112236.1-201ENST00000561977 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
AC112236.1-201ENST00000561977 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
AC112236.1-201ENST00000561977 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
AC112236.1-201ENST00000561977 RNF39Q9H2S5 420 aa18.36■□□□□ 0.53
AC112236.1-201ENST00000561977 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
AC112236.1-201ENST00000561977 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
AC112236.1-201ENST00000561977 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
AC112236.1-201ENST00000561977 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
AC112236.1-201ENST00000561977 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
AC112236.1-201ENST00000561977 KCNA4P22459 653 aa18.14■□□□□ 0.49
AC112236.1-201ENST00000561977 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
AC112236.1-201ENST00000561977 ATAD2BQ9ULI0 1458 aa18.11■□□□□ 0.49
AC112236.1-201ENST00000561977 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.49
AC112236.1-201ENST00000561977 C1QBPQ07021 282 aaKnown RBP18.07■□□□□ 0.48
AC112236.1-201ENST00000561977 BAZ1BQ9UIG0 1483 aaKnown RBP18.02■□□□□ 0.48
AC112236.1-201ENST00000561977 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.47
AC112236.1-201ENST00000561977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.46
AC112236.1-201ENST00000561977 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
AC112236.1-201ENST00000561977 WIZO95785 1651 aa17.79■□□□□ 0.44
AC112236.1-201ENST00000561977 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
AC112236.1-201ENST00000561977 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
AC112236.1-201ENST00000561977 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
AC112236.1-201ENST00000561977 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
AC112236.1-201ENST00000561977 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
AC112236.1-201ENST00000561977 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
AC112236.1-201ENST00000561977 CUX2O14529 1486 aa17.64■□□□□ 0.41
AC112236.1-201ENST00000561977 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
AC112236.1-201ENST00000561977 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
AC112236.1-201ENST00000561977 NESP48681 1621 aa17.59■□□□□ 0.41
AC112236.1-201ENST00000561977 CFTRP13569 1480 aa17.5■□□□□ 0.39
AC112236.1-201ENST00000561977 KIF21AQ7Z4S6 1674 aa17.49■□□□□ 0.39
AC112236.1-201ENST00000561977 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
AC112236.1-201ENST00000561977 THOC2Q8NI27 1593 aaKnown RBP17.45■□□□□ 0.38
AC112236.1-201ENST00000561977 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
AC112236.1-201ENST00000561977 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
AC112236.1-201ENST00000561977 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
AC112236.1-201ENST00000561977 FANCD2Q9BXW9 1451 aa17.41■□□□□ 0.38
AC112236.1-201ENST00000561977 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
AC112236.1-201ENST00000561977 WDR62O43379 1518 aa17.35■□□□□ 0.37
AC112236.1-201ENST00000561977 ABCC8Q09428 1581 aa17.3■□□□□ 0.36
AC112236.1-201ENST00000561977 CAPN15O75808 1086 aa17.24■□□□□ 0.35
AC112236.1-201ENST00000561977 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
AC112236.1-201ENST00000561977 DSG3P32926 999 aa17.22■□□□□ 0.35
AC112236.1-201ENST00000561977 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
AC112236.1-201ENST00000561977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
AC112236.1-201ENST00000561977 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
AC112236.1-201ENST00000561977 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
AC112236.1-201ENST00000561977 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
AC112236.1-201ENST00000561977 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
AC112236.1-201ENST00000561977 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
AC112236.1-201ENST00000561977 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
AC112236.1-201ENST00000561977 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
AC112236.1-201ENST00000561977 APLP2Q06481 763 aa17.07■□□□□ 0.32
AC112236.1-201ENST00000561977 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
AC112236.1-201ENST00000561977 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
AC112236.1-201ENST00000561977 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
AC112236.1-201ENST00000561977 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
AC112236.1-201ENST00000561977 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
AC112236.1-201ENST00000561977 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
AC112236.1-201ENST00000561977 SOGA1O94964 1423 aa16.91■□□□□ 0.3
AC112236.1-201ENST00000561977 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
AC112236.1-201ENST00000561977 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
AC112236.1-201ENST00000561977 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
AC112236.1-201ENST00000561977 CUX1P39880 1505 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 376 ms