RNA–Protein interactions for RNA: ENST00000561642.1

AC133561.2-202, humanhuman

TSL 1 (best) BASIC

Gene AC133561.2, Length 1,301 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC133561.2-202ENST00000561642 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
AC133561.2-202ENST00000561642 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.77
AC133561.2-202ENST00000561642 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
AC133561.2-202ENST00000561642 ABCC9O60706 1549 aa19.39■□□□□ 0.69
AC133561.2-202ENST00000561642 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
AC133561.2-202ENST00000561642 NACADO15069 1562 aa18.7■□□□□ 0.58
AC133561.2-202ENST00000561642 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
AC133561.2-202ENST00000561642 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
AC133561.2-202ENST00000561642 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
AC133561.2-202ENST00000561642 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
AC133561.2-202ENST00000561642 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
AC133561.2-202ENST00000561642 UNC13AQ9UPW8 1703 aa18.22■□□□□ 0.51
AC133561.2-202ENST00000561642 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
AC133561.2-202ENST00000561642 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
AC133561.2-202ENST00000561642 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
AC133561.2-202ENST00000561642 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
AC133561.2-202ENST00000561642 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
AC133561.2-202ENST00000561642 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
AC133561.2-202ENST00000561642 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
AC133561.2-202ENST00000561642 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
AC133561.2-202ENST00000561642 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
AC133561.2-202ENST00000561642 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
AC133561.2-202ENST00000561642 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
AC133561.2-202ENST00000561642 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
AC133561.2-202ENST00000561642 MROH2BQ7Z745 1585 aa17.29■□□□□ 0.36
AC133561.2-202ENST00000561642 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
AC133561.2-202ENST00000561642 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
AC133561.2-202ENST00000561642 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
AC133561.2-202ENST00000561642 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
AC133561.2-202ENST00000561642 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
AC133561.2-202ENST00000561642 WIZO95785 1651 aa17.02■□□□□ 0.32
AC133561.2-202ENST00000561642 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
AC133561.2-202ENST00000561642 NESP48681 1621 aa16.84■□□□□ 0.29
AC133561.2-202ENST00000561642 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
AC133561.2-202ENST00000561642 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
AC133561.2-202ENST00000561642 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
AC133561.2-202ENST00000561642 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
AC133561.2-202ENST00000561642 CFTRP13569 1480 aa16.71■□□□□ 0.27
AC133561.2-202ENST00000561642 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
AC133561.2-202ENST00000561642 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
AC133561.2-202ENST00000561642 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
AC133561.2-202ENST00000561642 CUX2O14529 1486 aa16.56■□□□□ 0.24
AC133561.2-202ENST00000561642 SUPT5HO00267 1087 aaKnown RBP16.55■□□□□ 0.24
AC133561.2-202ENST00000561642 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
AC133561.2-202ENST00000561642 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
AC133561.2-202ENST00000561642 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
AC133561.2-202ENST00000561642 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
AC133561.2-202ENST00000561642 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
AC133561.2-202ENST00000561642 WDR62O43379 1518 aa16.45■□□□□ 0.22
AC133561.2-202ENST00000561642 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
AC133561.2-202ENST00000561642 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
AC133561.2-202ENST00000561642 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
AC133561.2-202ENST00000561642 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
AC133561.2-202ENST00000561642 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
AC133561.2-202ENST00000561642 CUX1P39880 1505 aa16.19■□□□□ 0.18
AC133561.2-202ENST00000561642 IFT140Q96RY7 1462 aa16.17■□□□□ 0.18
AC133561.2-202ENST00000561642 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
AC133561.2-202ENST00000561642 TARBP1Q13395 1621 aaKnown RBP16.14■□□□□ 0.17
AC133561.2-202ENST00000561642 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
AC133561.2-202ENST00000561642 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
AC133561.2-202ENST00000561642 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
AC133561.2-202ENST00000561642 SOGA1O94964 1423 aa16.09■□□□□ 0.17
AC133561.2-202ENST00000561642 RAD54L2Q9Y4B4 1467 aa16.09■□□□□ 0.17
AC133561.2-202ENST00000561642 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
AC133561.2-202ENST00000561642 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
AC133561.2-202ENST00000561642 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
AC133561.2-202ENST00000561642 SYNJ1O43426 1573 aa16.02■□□□□ 0.16
AC133561.2-202ENST00000561642 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
AC133561.2-202ENST00000561642 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
AC133561.2-202ENST00000561642 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
AC133561.2-202ENST00000561642 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
AC133561.2-202ENST00000561642 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
AC133561.2-202ENST00000561642 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
AC133561.2-202ENST00000561642 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
AC133561.2-202ENST00000561642 ABCA5Q8WWZ7 1642 aa15.89■□□□□ 0.13
AC133561.2-202ENST00000561642 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
AC133561.2-202ENST00000561642 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
AC133561.2-202ENST00000561642 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
AC133561.2-202ENST00000561642 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
AC133561.2-202ENST00000561642 IGF1RP08069 1367 aa15.78■□□□□ 0.12
AC133561.2-202ENST00000561642 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.11
AC133561.2-202ENST00000561642 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
AC133561.2-202ENST00000561642 CHMP7Q8WUX9 453 aaPredicted RBP15.73■□□□□ 0.11
AC133561.2-202ENST00000561642 CHD1O14646 1710 aa15.73■□□□□ 0.11
AC133561.2-202ENST00000561642 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
AC133561.2-202ENST00000561642 FBLN2P98095 1184 aa15.71■□□□□ 0.11
AC133561.2-202ENST00000561642 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
AC133561.2-202ENST00000561642 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
AC133561.2-202ENST00000561642 FOXD1Q16676 465 aa15.69■□□□□ 0.1
AC133561.2-202ENST00000561642 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
AC133561.2-202ENST00000561642 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
AC133561.2-202ENST00000561642 NUP160Q12769 1436 aa15.68■□□□□ 0.1
AC133561.2-202ENST00000561642 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
AC133561.2-202ENST00000561642 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
AC133561.2-202ENST00000561642 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
AC133561.2-202ENST00000561642 CEP170Q5SW79 1584 aa15.6■□□□□ 0.09
AC133561.2-202ENST00000561642 CARMIL1Q5VZK9 1371 aa15.6■□□□□ 0.09
AC133561.2-202ENST00000561642 RIMBP3CA6NJZ7 1639 aa15.58■□□□□ 0.08
AC133561.2-202ENST00000561642 RIMBP3BA6NNM3 1639 aa15.58■□□□□ 0.08
AC133561.2-202ENST00000561642 RIMBP3Q9UFD9 1639 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms