RNA–Protein interactions for RNA: ENST00000561522.1

MTHFSD-205, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 4

Gene MTHFSD, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-205ENST00000561522 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
MTHFSD-205ENST00000561522 ABCC9O60706 1549 aa27.26■■□□□ 1.96
MTHFSD-205ENST00000561522 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
MTHFSD-205ENST00000561522 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
MTHFSD-205ENST00000561522 NACADO15069 1562 aa25.64■■□□□ 1.69
MTHFSD-205ENST00000561522 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
MTHFSD-205ENST00000561522 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
MTHFSD-205ENST00000561522 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.66
MTHFSD-205ENST00000561522 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.65
MTHFSD-205ENST00000561522 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
MTHFSD-205ENST00000561522 BICRAQ9NZM4 1560 aa25.19■■□□□ 1.62
MTHFSD-205ENST00000561522 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
MTHFSD-205ENST00000561522 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
MTHFSD-205ENST00000561522 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
MTHFSD-205ENST00000561522 SHROOM4Q9ULL8 1493 aa24.68■■□□□ 1.54
MTHFSD-205ENST00000561522 CC2D2AQ9P2K1 1620 aa24.63■■□□□ 1.53
MTHFSD-205ENST00000561522 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
MTHFSD-205ENST00000561522 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
MTHFSD-205ENST00000561522 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
MTHFSD-205ENST00000561522 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
MTHFSD-205ENST00000561522 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
MTHFSD-205ENST00000561522 SMARCA2P51531 1590 aa23.54■■□□□ 1.36
MTHFSD-205ENST00000561522 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
MTHFSD-205ENST00000561522 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
MTHFSD-205ENST00000561522 BAZ1AQ9NRL2 1556 aaPredicted RBP23.46■■□□□ 1.35
MTHFSD-205ENST00000561522 NESP48681 1621 aa23.44■■□□□ 1.34
MTHFSD-205ENST00000561522 CUX2O14529 1486 aa23.42■■□□□ 1.34
MTHFSD-205ENST00000561522 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
MTHFSD-205ENST00000561522 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
MTHFSD-205ENST00000561522 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
MTHFSD-205ENST00000561522 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
MTHFSD-205ENST00000561522 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
MTHFSD-205ENST00000561522 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
MTHFSD-205ENST00000561522 LAMC3Q9Y6N6 1575 aa23.17■■□□□ 1.3
MTHFSD-205ENST00000561522 WIZO95785 1651 aa23.12■■□□□ 1.29
MTHFSD-205ENST00000561522 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
MTHFSD-205ENST00000561522 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
MTHFSD-205ENST00000561522 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
MTHFSD-205ENST00000561522 WDR62O43379 1518 aa22.83■■□□□ 1.25
MTHFSD-205ENST00000561522 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
MTHFSD-205ENST00000561522 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
MTHFSD-205ENST00000561522 TOP2AP11388 1531 aaKnown RBP22.76■■□□□ 1.23
MTHFSD-205ENST00000561522 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
MTHFSD-205ENST00000561522 CFTRP13569 1480 aa22.68■■□□□ 1.22
MTHFSD-205ENST00000561522 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
MTHFSD-205ENST00000561522 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
MTHFSD-205ENST00000561522 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
MTHFSD-205ENST00000561522 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
MTHFSD-205ENST00000561522 ZNF608Q9ULD9 1512 aaPredicted RBP22.33■■□□□ 1.17
MTHFSD-205ENST00000561522 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
MTHFSD-205ENST00000561522 IFT140Q96RY7 1462 aa22.27■■□□□ 1.16
MTHFSD-205ENST00000561522 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
MTHFSD-205ENST00000561522 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
MTHFSD-205ENST00000561522 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
MTHFSD-205ENST00000561522 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
MTHFSD-205ENST00000561522 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
MTHFSD-205ENST00000561522 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
MTHFSD-205ENST00000561522 TARBP1Q13395 1621 aaKnown RBP22.16■■□□□ 1.14
MTHFSD-205ENST00000561522 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
MTHFSD-205ENST00000561522 CHD1O14646 1710 aa22.12■■□□□ 1.13
MTHFSD-205ENST00000561522 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
MTHFSD-205ENST00000561522 AQRO60306 1485 aaKnown RBP eCLIP22.08■■□□□ 1.12
MTHFSD-205ENST00000561522 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
MTHFSD-205ENST00000561522 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
MTHFSD-205ENST00000561522 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
MTHFSD-205ENST00000561522 CUX1P39880 1505 aa21.96■■□□□ 1.11
MTHFSD-205ENST00000561522 SOGA1O94964 1423 aa21.91■■□□□ 1.1
MTHFSD-205ENST00000561522 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
MTHFSD-205ENST00000561522 FBLN2P98095 1184 aa21.9■■□□□ 1.1
MTHFSD-205ENST00000561522 SNAPC4Q5SXM2 1469 aa21.89■■□□□ 1.09
MTHFSD-205ENST00000561522 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
MTHFSD-205ENST00000561522 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
MTHFSD-205ENST00000561522 CYB5RLQ6IPT4 315 aa21.81■■□□□ 1.08
MTHFSD-205ENST00000561522 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
MTHFSD-205ENST00000561522 CLASP1Q7Z460 1538 aa21.79■■□□□ 1.08
MTHFSD-205ENST00000561522 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
MTHFSD-205ENST00000561522 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
MTHFSD-205ENST00000561522 GRIN2BQ13224 1484 aa21.74■■□□□ 1.07
MTHFSD-205ENST00000561522 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
MTHFSD-205ENST00000561522 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
MTHFSD-205ENST00000561522 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
MTHFSD-205ENST00000561522 GAPVD1Q14C86 1478 aa21.68■■□□□ 1.06
MTHFSD-205ENST00000561522 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
MTHFSD-205ENST00000561522 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
MTHFSD-205ENST00000561522 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
MTHFSD-205ENST00000561522 TRHP20396 242 aaPredicted RBP21.58■■□□□ 1.05
MTHFSD-205ENST00000561522 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
MTHFSD-205ENST00000561522 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
MTHFSD-205ENST00000561522 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
MTHFSD-205ENST00000561522 GRIN2AQ12879 1464 aa21.51■■□□□ 1.03
MTHFSD-205ENST00000561522 CEP170Q5SW79 1584 aa21.5■■□□□ 1.03
MTHFSD-205ENST00000561522 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
MTHFSD-205ENST00000561522 NUP160Q12769 1436 aa21.41■■□□□ 1.02
MTHFSD-205ENST00000561522 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
MTHFSD-205ENST00000561522 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
MTHFSD-205ENST00000561522 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
MTHFSD-205ENST00000561522 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
MTHFSD-205ENST00000561522 PRG4Q92954 1404 aaPredicted RBP21.21■□□□□ 0.99
MTHFSD-205ENST00000561522 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
MTHFSD-205ENST00000561522 CUL7Q14999 1698 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms