RNA–Protein interactions for RNA: ENST00000561471.1

AC109460.4-201, humanhuman

TSL 3 BASIC

Gene AC109460.4, Length 454 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109460.4-201ENST00000561471 NISCHQ9Y2I1 1504 aa19.26■□□□□ 0.67
AC109460.4-201ENST00000561471 ABCC9O60706 1549 aa17.62■□□□□ 0.41
AC109460.4-201ENST00000561471 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
AC109460.4-201ENST00000561471 CCDC180Q9P1Z9 1646 aa17.42■□□□□ 0.38
AC109460.4-201ENST00000561471 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
AC109460.4-201ENST00000561471 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
AC109460.4-201ENST00000561471 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
AC109460.4-201ENST00000561471 NACADO15069 1562 aa16.45■□□□□ 0.22
AC109460.4-201ENST00000561471 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
AC109460.4-201ENST00000561471 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
AC109460.4-201ENST00000561471 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
AC109460.4-201ENST00000561471 BICRAQ9NZM4 1560 aa16.22■□□□□ 0.19
AC109460.4-201ENST00000561471 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
AC109460.4-201ENST00000561471 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
AC109460.4-201ENST00000561471 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
AC109460.4-201ENST00000561471 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
AC109460.4-201ENST00000561471 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
AC109460.4-201ENST00000561471 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
AC109460.4-201ENST00000561471 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
AC109460.4-201ENST00000561471 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
AC109460.4-201ENST00000561471 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
AC109460.4-201ENST00000561471 CUX2O14529 1486 aa15.2■□□□□ 0.02
AC109460.4-201ENST00000561471 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
AC109460.4-201ENST00000561471 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
AC109460.4-201ENST00000561471 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
AC109460.4-201ENST00000561471 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
AC109460.4-201ENST00000561471 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
AC109460.4-201ENST00000561471 NESP48681 1621 aa15.1■□□□□ 0.01
AC109460.4-201ENST00000561471 HMGXB3Q12766 1538 aa15.07■□□□□ 0
AC109460.4-201ENST00000561471 SMARCA2P51531 1590 aa15.07■□□□□ 0
AC109460.4-201ENST00000561471 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
AC109460.4-201ENST00000561471 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
AC109460.4-201ENST00000561471 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
AC109460.4-201ENST00000561471 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
AC109460.4-201ENST00000561471 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
AC109460.4-201ENST00000561471 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
AC109460.4-201ENST00000561471 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
AC109460.4-201ENST00000561471 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
AC109460.4-201ENST00000561471 PDS5BQ9NTI5 1447 aa14.76□□□□□ -0.05
AC109460.4-201ENST00000561471 WIZO95785 1651 aa14.74□□□□□ -0.05
AC109460.4-201ENST00000561471 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
AC109460.4-201ENST00000561471 MRC2Q9UBG0 1479 aa14.7□□□□□ -0.06
AC109460.4-201ENST00000561471 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
AC109460.4-201ENST00000561471 WDR62O43379 1518 aa14.69□□□□□ -0.06
AC109460.4-201ENST00000561471 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
AC109460.4-201ENST00000561471 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
AC109460.4-201ENST00000561471 CFTRP13569 1480 aa14.5□□□□□ -0.09
AC109460.4-201ENST00000561471 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
AC109460.4-201ENST00000561471 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
AC109460.4-201ENST00000561471 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
AC109460.4-201ENST00000561471 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
AC109460.4-201ENST00000561471 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
AC109460.4-201ENST00000561471 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
AC109460.4-201ENST00000561471 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
AC109460.4-201ENST00000561471 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
AC109460.4-201ENST00000561471 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
AC109460.4-201ENST00000561471 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
AC109460.4-201ENST00000561471 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
AC109460.4-201ENST00000561471 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
AC109460.4-201ENST00000561471 EIF4G3O43432 1585 aaKnown RBP14.3□□□□□ -0.12
AC109460.4-201ENST00000561471 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
AC109460.4-201ENST00000561471 CHD1O14646 1710 aa14.29□□□□□ -0.12
AC109460.4-201ENST00000561471 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
AC109460.4-201ENST00000561471 TARBP1Q13395 1621 aaKnown RBP14.22□□□□□ -0.13
AC109460.4-201ENST00000561471 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
AC109460.4-201ENST00000561471 CYB5RLQ6IPT4 315 aa14.16□□□□□ -0.14
AC109460.4-201ENST00000561471 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
AC109460.4-201ENST00000561471 ARAP1Q96P48 1450 aa14.14□□□□□ -0.15
AC109460.4-201ENST00000561471 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
AC109460.4-201ENST00000561471 FBLN2P98095 1184 aa14.11□□□□□ -0.15
AC109460.4-201ENST00000561471 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
AC109460.4-201ENST00000561471 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
AC109460.4-201ENST00000561471 FOXD1Q16676 465 aa14.07□□□□□ -0.16
AC109460.4-201ENST00000561471 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
AC109460.4-201ENST00000561471 SNAPC4Q5SXM2 1469 aa14.04□□□□□ -0.16
AC109460.4-201ENST00000561471 CLASP1Q7Z460 1538 aa14.03□□□□□ -0.16
AC109460.4-201ENST00000561471 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
AC109460.4-201ENST00000561471 SOGA1O94964 1423 aa14.02□□□□□ -0.16
AC109460.4-201ENST00000561471 WDR97A6NE52 1622 aa14□□□□□ -0.17
AC109460.4-201ENST00000561471 CUX1P39880 1505 aa13.99□□□□□ -0.17
AC109460.4-201ENST00000561471 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
AC109460.4-201ENST00000561471 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
AC109460.4-201ENST00000561471 MAGI1Q96QZ7 1491 aaPredicted RBP13.94□□□□□ -0.18
AC109460.4-201ENST00000561471 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
AC109460.4-201ENST00000561471 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
AC109460.4-201ENST00000561471 SYNJ2O15056 1496 aa13.91□□□□□ -0.18
AC109460.4-201ENST00000561471 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
AC109460.4-201ENST00000561471 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
AC109460.4-201ENST00000561471 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
AC109460.4-201ENST00000561471 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
AC109460.4-201ENST00000561471 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
AC109460.4-201ENST00000561471 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
AC109460.4-201ENST00000561471 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
AC109460.4-201ENST00000561471 GRIN2AQ12879 1464 aa13.77□□□□□ -0.21
AC109460.4-201ENST00000561471 SHROOM2Q13796 1616 aa13.74□□□□□ -0.21
AC109460.4-201ENST00000561471 KIF13AQ9H1H9 1805 aa13.74□□□□□ -0.21
AC109460.4-201ENST00000561471 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
AC109460.4-201ENST00000561471 NUP160Q12769 1436 aa13.71□□□□□ -0.22
AC109460.4-201ENST00000561471 TOP2BQ02880 1626 aa13.7□□□□□ -0.22
AC109460.4-201ENST00000561471 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms