RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
IRF9-213ENST00000561342 ABCC9O60706 1549 aa27.91■■■□□ 2.06
IRF9-213ENST00000561342 DNAJC5BQ9UF47 199 aa26.96■■□□□ 1.91
IRF9-213ENST00000561342 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
IRF9-213ENST00000561342 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
IRF9-213ENST00000561342 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
IRF9-213ENST00000561342 NACADO15069 1562 aa25.78■■□□□ 1.72
IRF9-213ENST00000561342 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
IRF9-213ENST00000561342 DNAJC5Q9H3Z4 198 aa25.46■■□□□ 1.67
IRF9-213ENST00000561342 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
IRF9-213ENST00000561342 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
IRF9-213ENST00000561342 CECR2Q9BXF3 1484 aa25.26■■□□□ 1.63
IRF9-213ENST00000561342 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.62
IRF9-213ENST00000561342 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
IRF9-213ENST00000561342 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
IRF9-213ENST00000561342 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
IRF9-213ENST00000561342 SCRIBQ14160 1630 aa24.54■■□□□ 1.52
IRF9-213ENST00000561342 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
IRF9-213ENST00000561342 CUX2O14529 1486 aa24.44■■□□□ 1.5
IRF9-213ENST00000561342 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
IRF9-213ENST00000561342 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
IRF9-213ENST00000561342 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
IRF9-213ENST00000561342 NCAPD3P42695 1498 aa23.85■■□□□ 1.41
IRF9-213ENST00000561342 NESP48681 1621 aa23.69■■□□□ 1.38
IRF9-213ENST00000561342 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
IRF9-213ENST00000561342 THOC2Q8NI27 1593 aaKnown RBP23.56■■□□□ 1.36
IRF9-213ENST00000561342 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
IRF9-213ENST00000561342 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
IRF9-213ENST00000561342 PDS5BQ9NTI5 1447 aa23.4■■□□□ 1.34
IRF9-213ENST00000561342 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
IRF9-213ENST00000561342 BAZ1BQ9UIG0 1483 aaKnown RBP23.37■■□□□ 1.33
IRF9-213ENST00000561342 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
IRF9-213ENST00000561342 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
IRF9-213ENST00000561342 KIF21AQ7Z4S6 1674 aa23.24■■□□□ 1.31
IRF9-213ENST00000561342 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
IRF9-213ENST00000561342 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
IRF9-213ENST00000561342 WDR62O43379 1518 aa23.11■■□□□ 1.29
IRF9-213ENST00000561342 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
IRF9-213ENST00000561342 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
IRF9-213ENST00000561342 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
IRF9-213ENST00000561342 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
IRF9-213ENST00000561342 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
IRF9-213ENST00000561342 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
IRF9-213ENST00000561342 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
IRF9-213ENST00000561342 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
IRF9-213ENST00000561342 TRHP20396 242 aaPredicted RBP22.84■■□□□ 1.25
IRF9-213ENST00000561342 FANCD2Q9BXW9 1451 aa22.81■■□□□ 1.24
IRF9-213ENST00000561342 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
IRF9-213ENST00000561342 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
IRF9-213ENST00000561342 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
IRF9-213ENST00000561342 CFTRP13569 1480 aa22.62■■□□□ 1.21
IRF9-213ENST00000561342 IFT140Q96RY7 1462 aa22.51■■□□□ 1.19
IRF9-213ENST00000561342 ZNF608Q9ULD9 1512 aaPredicted RBP22.51■■□□□ 1.19
IRF9-213ENST00000561342 WIZO95785 1651 aa22.49■■□□□ 1.19
IRF9-213ENST00000561342 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
IRF9-213ENST00000561342 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
IRF9-213ENST00000561342 FBLN2P98095 1184 aa22.37■■□□□ 1.17
IRF9-213ENST00000561342 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
IRF9-213ENST00000561342 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
IRF9-213ENST00000561342 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.153e-7■■■■■ 33.8
IRF9-213ENST00000561342 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
IRF9-213ENST00000561342 CHD1O14646 1710 aa22.21■■□□□ 1.15
IRF9-213ENST00000561342 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
IRF9-213ENST00000561342 PRDM2Q13029 1718 aa22.1■■□□□ 1.13
IRF9-213ENST00000561342 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.12
IRF9-213ENST00000561342 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
IRF9-213ENST00000561342 TARBP1Q13395 1621 aaKnown RBP22.06■■□□□ 1.12
IRF9-213ENST00000561342 CLASP1Q7Z460 1538 aa22.02■■□□□ 1.12
IRF9-213ENST00000561342 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
IRF9-213ENST00000561342 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
IRF9-213ENST00000561342 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
IRF9-213ENST00000561342 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
IRF9-213ENST00000561342 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
IRF9-213ENST00000561342 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.1
IRF9-213ENST00000561342 SOGA1O94964 1423 aa21.93■■□□□ 1.1
IRF9-213ENST00000561342 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
IRF9-213ENST00000561342 ILDR1Q86SU0 546 aaPredicted RBP21.9■■□□□ 1.1
IRF9-213ENST00000561342 MAGI1Q96QZ7 1491 aaPredicted RBP21.89■■□□□ 1.09
IRF9-213ENST00000561342 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
IRF9-213ENST00000561342 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
IRF9-213ENST00000561342 WDR97A6NE52 1622 aa21.81■■□□□ 1.08
IRF9-213ENST00000561342 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
IRF9-213ENST00000561342 KDM4FA0A1W2PPD8 638 aa21.63■■□□□ 1.05
IRF9-213ENST00000561342 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
IRF9-213ENST00000561342 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
IRF9-213ENST00000561342 CUX1P39880 1505 aa21.52■■□□□ 1.04
IRF9-213ENST00000561342 CEP170Q5SW79 1584 aa21.52■■□□□ 1.04
IRF9-213ENST00000561342 GRIN2AQ12879 1464 aa21.51■■□□□ 1.03
IRF9-213ENST00000561342 KIF13AQ9H1H9 1805 aa21.5■■□□□ 1.03
IRF9-213ENST00000561342 NPM1P06748 294 aaKnown RBP eCLIP21.49■■□□□ 1.03
IRF9-213ENST00000561342 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
IRF9-213ENST00000561342 ABCC10Q5T3U5 1492 aa21.47■■□□□ 1.03
IRF9-213ENST00000561342 NUP160Q12769 1436 aa21.46■■□□□ 1.03
IRF9-213ENST00000561342 ABCA10Q8WWZ4 1543 aa21.43■■□□□ 1.02
IRF9-213ENST00000561342 KDM6BO15054 1643 aa21.39■■□□□ 1.01
IRF9-213ENST00000561342 ABCA5Q8WWZ7 1642 aa21.39■■□□□ 1.01
IRF9-213ENST00000561342 SHROOM2Q13796 1616 aa21.38■■□□□ 1.01
IRF9-213ENST00000561342 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
IRF9-213ENST00000561342 JPH4Q96JJ6 628 aa21.34■■□□□ 1.01
IRF9-213ENST00000561342 FHAD1B1AJZ9 1412 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms