RNA–Protein interactions for RNA: ENST00000561119.5

CRTC3-211, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 630 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-211ENST00000561119 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
CRTC3-211ENST00000561119 ABCC9O60706 1549 aa24.07■■□□□ 1.44
CRTC3-211ENST00000561119 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
CRTC3-211ENST00000561119 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
CRTC3-211ENST00000561119 DNAJC5Q9H3Z4 198 aa22.55■■□□□ 1.2
CRTC3-211ENST00000561119 PABPN1Q86U42 306 aaKnown RBP eCLIP22.32■■□□□ 1.16
CRTC3-211ENST00000561119 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
CRTC3-211ENST00000561119 DCAF8L2P0C7V8 631 aa21.75■■□□□ 1.07
CRTC3-211ENST00000561119 UNC13AQ9UPW8 1703 aa21.73■■□□□ 1.07
CRTC3-211ENST00000561119 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
CRTC3-211ENST00000561119 NACADO15069 1562 aa21.68■■□□□ 1.06
CRTC3-211ENST00000561119 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
CRTC3-211ENST00000561119 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
CRTC3-211ENST00000561119 TRIM41Q8WV44 630 aa21.27■■□□□ 1
CRTC3-211ENST00000561119 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
CRTC3-211ENST00000561119 CUX2O14529 1486 aa21.03■□□□□ 0.96
CRTC3-211ENST00000561119 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
CRTC3-211ENST00000561119 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.93
CRTC3-211ENST00000561119 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
CRTC3-211ENST00000561119 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
CRTC3-211ENST00000561119 NESP48681 1621 aa20.34■□□□□ 0.85
CRTC3-211ENST00000561119 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
CRTC3-211ENST00000561119 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
CRTC3-211ENST00000561119 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
CRTC3-211ENST00000561119 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
CRTC3-211ENST00000561119 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
CRTC3-211ENST00000561119 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
CRTC3-211ENST00000561119 OSCARQ8IYS5 282 aa20.02■□□□□ 0.8
CRTC3-211ENST00000561119 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
CRTC3-211ENST00000561119 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
CRTC3-211ENST00000561119 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
CRTC3-211ENST00000561119 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
CRTC3-211ENST00000561119 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
CRTC3-211ENST00000561119 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
CRTC3-211ENST00000561119 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
CRTC3-211ENST00000561119 LAMC3Q9Y6N6 1575 aa19.78■□□□□ 0.76
CRTC3-211ENST00000561119 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
CRTC3-211ENST00000561119 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
CRTC3-211ENST00000561119 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
CRTC3-211ENST00000561119 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
CRTC3-211ENST00000561119 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
CRTC3-211ENST00000561119 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
CRTC3-211ENST00000561119 ILDR1Q86SU0 546 aaPredicted RBP19.63■□□□□ 0.73
CRTC3-211ENST00000561119 WDR62O43379 1518 aa19.62■□□□□ 0.73
CRTC3-211ENST00000561119 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
CRTC3-211ENST00000561119 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
CRTC3-211ENST00000561119 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
CRTC3-211ENST00000561119 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
CRTC3-211ENST00000561119 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.67
CRTC3-211ENST00000561119 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
CRTC3-211ENST00000561119 ZNF608Q9ULD9 1512 aaPredicted RBP19.23■□□□□ 0.67
CRTC3-211ENST00000561119 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
CRTC3-211ENST00000561119 FBLN2P98095 1184 aa19.15■□□□□ 0.66
CRTC3-211ENST00000561119 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
CRTC3-211ENST00000561119 CHD1O14646 1710 aa19.08■□□□□ 0.65
CRTC3-211ENST00000561119 RSF1Q96T23 1441 aaPredicted RBP19.04■□□□□ 0.64
CRTC3-211ENST00000561119 IFT140Q96RY7 1462 aa19■□□□□ 0.63
CRTC3-211ENST00000561119 EIF4G3O43432 1585 aaKnown RBP18.96■□□□□ 0.63
CRTC3-211ENST00000561119 CFTRP13569 1480 aa18.93■□□□□ 0.62
CRTC3-211ENST00000561119 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.627e-7■■■■□ 24.7
CRTC3-211ENST00000561119 KDM4FA0A1W2PPD8 638 aa18.9■□□□□ 0.62
CRTC3-211ENST00000561119 WIZO95785 1651 aa18.85■□□□□ 0.61
CRTC3-211ENST00000561119 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
CRTC3-211ENST00000561119 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
CRTC3-211ENST00000561119 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
CRTC3-211ENST00000561119 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
CRTC3-211ENST00000561119 SYNJ1O43426 1573 aa18.64■□□□□ 0.58
CRTC3-211ENST00000561119 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
CRTC3-211ENST00000561119 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
CRTC3-211ENST00000561119 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
CRTC3-211ENST00000561119 KIF13AQ9H1H9 1805 aa18.61■□□□□ 0.57
CRTC3-211ENST00000561119 FBXO41Q8TF61 875 aa18.58■□□□□ 0.56
CRTC3-211ENST00000561119 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
CRTC3-211ENST00000561119 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
CRTC3-211ENST00000561119 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
CRTC3-211ENST00000561119 HECW2Q9P2P5 1572 aa18.53■□□□□ 0.56
CRTC3-211ENST00000561119 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
CRTC3-211ENST00000561119 FAM69CQ0P6D2 419 aa18.52■□□□□ 0.56
CRTC3-211ENST00000561119 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
CRTC3-211ENST00000561119 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
CRTC3-211ENST00000561119 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
CRTC3-211ENST00000561119 KDM6BO15054 1643 aa18.44■□□□□ 0.54
CRTC3-211ENST00000561119 SOGA1O94964 1423 aa18.42■□□□□ 0.54
CRTC3-211ENST00000561119 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
CRTC3-211ENST00000561119 ILDR2Q71H61 639 aa18.41■□□□□ 0.54
CRTC3-211ENST00000561119 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
CRTC3-211ENST00000561119 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
CRTC3-211ENST00000561119 ADGRL1O94910 1474 aa18.39■□□□□ 0.54
CRTC3-211ENST00000561119 SOCS7O14512 581 aa18.36■□□□□ 0.53
CRTC3-211ENST00000561119 TSPOAP1O95153 1857 aa18.34■□□□□ 0.53
CRTC3-211ENST00000561119 GRIN2BQ13224 1484 aa18.33■□□□□ 0.53
CRTC3-211ENST00000561119 ABCC10Q5T3U5 1492 aa18.33■□□□□ 0.52
CRTC3-211ENST00000561119 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
CRTC3-211ENST00000561119 CEP170Q5SW79 1584 aa18.28■□□□□ 0.52
CRTC3-211ENST00000561119 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
CRTC3-211ENST00000561119 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
CRTC3-211ENST00000561119 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
CRTC3-211ENST00000561119 DISP3Q9P2K9 1392 aa18.21■□□□□ 0.51
CRTC3-211ENST00000561119 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
CRTC3-211ENST00000561119 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms