RNA–Protein interactions for RNA: ENST00000560913.1

PPP1R3E-206, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-206ENST00000560913 NISCHQ9Y2I1 1504 aa43■■■■■ 4.47
PPP1R3E-206ENST00000560913 CCDC180Q9P1Z9 1646 aa38.53■■■■□ 3.76
PPP1R3E-206ENST00000560913 ABCC9O60706 1549 aa38.24■■■■□ 3.71
PPP1R3E-206ENST00000560913 AEBP2Q6ZN18 517 aaPredicted RBP37.67■■■■□ 3.62
PPP1R3E-206ENST00000560913 RB1CC1Q8TDY2 1594 aa36.52■■■■□ 3.44
PPP1R3E-206ENST00000560913 NACADO15069 1562 aa36.34■■■■□ 3.41
PPP1R3E-206ENST00000560913 CHIC1Q5VXU3 224 aa36.18■■■■□ 3.38
PPP1R3E-206ENST00000560913 DCAF8L2P0C7V8 631 aa36.03■■■■□ 3.36
PPP1R3E-206ENST00000560913 MYO15BQ96JP2 1530 aa35.95■■■■□ 3.35
PPP1R3E-206ENST00000560913 UNC13AQ9UPW8 1703 aa35.8■■■■□ 3.32
PPP1R3E-206ENST00000560913 DNAJC5BQ9UF47 199 aa35.74■■■■□ 3.31
PPP1R3E-206ENST00000560913 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
PPP1R3E-206ENST00000560913 PABPN1Q86U42 306 aaKnown RBP eCLIP35.6■■■■□ 3.296e-6■■□□□ 12.8
PPP1R3E-206ENST00000560913 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.28
PPP1R3E-206ENST00000560913 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
PPP1R3E-206ENST00000560913 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
PPP1R3E-206ENST00000560913 SHROOM4Q9ULL8 1493 aa35.02■■■■□ 3.2
PPP1R3E-206ENST00000560913 CC2D2AQ9P2K1 1620 aa34.6■■■■□ 3.13
PPP1R3E-206ENST00000560913 EIF4G1Q04637 1599 aaKnown RBP34.58■■■■□ 3.13
PPP1R3E-206ENST00000560913 CECR2Q9BXF3 1484 aa34.43■■■■□ 3.1
PPP1R3E-206ENST00000560913 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
PPP1R3E-206ENST00000560913 SMARCA4P51532 1647 aa33.51■■■□□ 2.96
PPP1R3E-206ENST00000560913 ATAD2BQ9ULI0 1458 aa33.47■■■□□ 2.95
PPP1R3E-206ENST00000560913 SMARCA2P51531 1590 aa33.37■■■□□ 2.93
PPP1R3E-206ENST00000560913 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
PPP1R3E-206ENST00000560913 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
PPP1R3E-206ENST00000560913 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
PPP1R3E-206ENST00000560913 MROH2BQ7Z745 1585 aa33.14■■■□□ 2.9
PPP1R3E-206ENST00000560913 BAZ1BQ9UIG0 1483 aaKnown RBP33.12■■■□□ 2.89
PPP1R3E-206ENST00000560913 ERCC6Q03468 1493 aa32.95■■■□□ 2.87
PPP1R3E-206ENST00000560913 NESP48681 1621 aa32.95■■■□□ 2.86
PPP1R3E-206ENST00000560913 CUX2O14529 1486 aa32.89■■■□□ 2.86
PPP1R3E-206ENST00000560913 WIZO95785 1651 aa32.76■■■□□ 2.84
PPP1R3E-206ENST00000560913 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
PPP1R3E-206ENST00000560913 DNAJC5Q9H3Z4 198 aa32.63■■■□□ 2.81
PPP1R3E-206ENST00000560913 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
PPP1R3E-206ENST00000560913 KIF21AQ7Z4S6 1674 aa32.56■■■□□ 2.8
PPP1R3E-206ENST00000560913 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.8
PPP1R3E-206ENST00000560913 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
PPP1R3E-206ENST00000560913 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
PPP1R3E-206ENST00000560913 TOP2AP11388 1531 aaKnown RBP32.34■■■□□ 2.77
PPP1R3E-206ENST00000560913 MRC2Q9UBG0 1479 aa32.24■■■□□ 2.75
PPP1R3E-206ENST00000560913 SENP3Q9H4L4 574 aaPredicted RBP32.22■■■□□ 2.75
PPP1R3E-206ENST00000560913 CFTRP13569 1480 aa32.21■■■□□ 2.75
PPP1R3E-206ENST00000560913 WDR62O43379 1518 aa32.2■■■□□ 2.74
PPP1R3E-206ENST00000560913 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.74
PPP1R3E-206ENST00000560913 FANCD2Q9BXW9 1451 aa32.13■■■□□ 2.73
PPP1R3E-206ENST00000560913 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
PPP1R3E-206ENST00000560913 PRDM2Q13029 1718 aa31.97■■■□□ 2.71
PPP1R3E-206ENST00000560913 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
PPP1R3E-206ENST00000560913 PHF23Q9BUL5 403 aaPredicted RBP31.83■■■□□ 2.69
PPP1R3E-206ENST00000560913 TOPBP1Q92547 1522 aa31.57■■■□□ 2.64
PPP1R3E-206ENST00000560913 IFT140Q96RY7 1462 aa31.5■■■□□ 2.63
PPP1R3E-206ENST00000560913 ABCC8Q09428 1581 aa31.49■■■□□ 2.63
PPP1R3E-206ENST00000560913 DNMBPQ6XZF7 1577 aa31.48■■■□□ 2.63
PPP1R3E-206ENST00000560913 ZNF608Q9ULD9 1512 aaPredicted RBP31.45■■■□□ 2.63
PPP1R3E-206ENST00000560913 OSCARQ8IYS5 282 aa31.37■■■□□ 2.61
PPP1R3E-206ENST00000560913 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
PPP1R3E-206ENST00000560913 EIF4G3O43432 1585 aaKnown RBP31.3■■■□□ 2.6
PPP1R3E-206ENST00000560913 POLA1P09884 1462 aaPredicted RBP31.27■■■□□ 2.6
PPP1R3E-206ENST00000560913 TRIM41Q8WV44 630 aa31.19■■■□□ 2.58
PPP1R3E-206ENST00000560913 AQRO60306 1485 aaKnown RBP eCLIP31.17■■■□□ 2.58
PPP1R3E-206ENST00000560913 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.57
PPP1R3E-206ENST00000560913 CUX1P39880 1505 aa31.12■■■□□ 2.57
PPP1R3E-206ENST00000560913 SUPT5HO00267 1087 aaKnown RBP31.11■■■□□ 2.57
PPP1R3E-206ENST00000560913 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
PPP1R3E-206ENST00000560913 SOGA1O94964 1423 aa31.08■■■□□ 2.57
PPP1R3E-206ENST00000560913 CHD1O14646 1710 aa31.05■■■□□ 2.56
PPP1R3E-206ENST00000560913 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
PPP1R3E-206ENST00000560913 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
PPP1R3E-206ENST00000560913 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
PPP1R3E-206ENST00000560913 TDRD9Q8NDG6 1382 aaKnown RBP31■■■□□ 2.55
PPP1R3E-206ENST00000560913 WDR97A6NE52 1622 aa30.99■■■□□ 2.55
PPP1R3E-206ENST00000560913 ARHGEF11O15085 1522 aa30.93■■■□□ 2.54
PPP1R3E-206ENST00000560913 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
PPP1R3E-206ENST00000560913 FBLN2P98095 1184 aa30.82■■■□□ 2.52
PPP1R3E-206ENST00000560913 GRIN2BQ13224 1484 aa30.81■■■□□ 2.52
PPP1R3E-206ENST00000560913 MAGI1Q96QZ7 1491 aaPredicted RBP30.8■■■□□ 2.52
PPP1R3E-206ENST00000560913 ABCA10Q8WWZ4 1543 aa30.77■■■□□ 2.52
PPP1R3E-206ENST00000560913 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
PPP1R3E-206ENST00000560913 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
PPP1R3E-206ENST00000560913 GAPVD1Q14C86 1478 aa30.72■■■□□ 2.51
PPP1R3E-206ENST00000560913 BIVM-ERCC5R4GMW8 1640 aa30.71■■■□□ 2.51
PPP1R3E-206ENST00000560913 CLASP1Q7Z460 1538 aa30.71■■■□□ 2.51
PPP1R3E-206ENST00000560913 SYNJ2O15056 1496 aa30.69■■■□□ 2.5
PPP1R3E-206ENST00000560913 TOP2BQ02880 1626 aa30.68■■■□□ 2.5
PPP1R3E-206ENST00000560913 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
PPP1R3E-206ENST00000560913 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
PPP1R3E-206ENST00000560913 ARAP1Q96P48 1450 aa30.64■■■□□ 2.5
PPP1R3E-206ENST00000560913 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.49
PPP1R3E-206ENST00000560913 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
PPP1R3E-206ENST00000560913 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
PPP1R3E-206ENST00000560913 GRIN2AQ12879 1464 aa30.43■■■□□ 2.46
PPP1R3E-206ENST00000560913 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
PPP1R3E-206ENST00000560913 FHAD1B1AJZ9 1412 aa30.35■■■□□ 2.45
PPP1R3E-206ENST00000560913 CEP170Q5SW79 1584 aa30.34■■■□□ 2.45
PPP1R3E-206ENST00000560913 NUP160Q12769 1436 aa30.34■■■□□ 2.45
PPP1R3E-206ENST00000560913 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
PPP1R3E-206ENST00000560913 SHROOM2Q13796 1616 aa30.22■■■□□ 2.43
PPP1R3E-206ENST00000560913 TRHP20396 242 aaPredicted RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms