RNA–Protein interactions for RNA: ENST00000560870.1

AC027237.4-201, humanhuman

TSL 3 BASIC

Gene AC027237.4, Length 694 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027237.4-201ENST00000560870 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
AC027237.4-201ENST00000560870 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
AC027237.4-201ENST00000560870 ABCC9O60706 1549 aa26.08■■□□□ 1.77
AC027237.4-201ENST00000560870 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
AC027237.4-201ENST00000560870 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
AC027237.4-201ENST00000560870 NACADO15069 1562 aa24.8■■□□□ 1.56
AC027237.4-201ENST00000560870 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
AC027237.4-201ENST00000560870 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
AC027237.4-201ENST00000560870 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
AC027237.4-201ENST00000560870 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.48
AC027237.4-201ENST00000560870 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
AC027237.4-201ENST00000560870 DNAJC5BQ9UF47 199 aa24.23■■□□□ 1.47
AC027237.4-201ENST00000560870 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
AC027237.4-201ENST00000560870 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
AC027237.4-201ENST00000560870 SHROOM4Q9ULL8 1493 aa23.82■■□□□ 1.4
AC027237.4-201ENST00000560870 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.36
AC027237.4-201ENST00000560870 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
AC027237.4-201ENST00000560870 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
AC027237.4-201ENST00000560870 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
AC027237.4-201ENST00000560870 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
AC027237.4-201ENST00000560870 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.25
AC027237.4-201ENST00000560870 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
AC027237.4-201ENST00000560870 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
AC027237.4-201ENST00000560870 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
AC027237.4-201ENST00000560870 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
AC027237.4-201ENST00000560870 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
AC027237.4-201ENST00000560870 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.22
AC027237.4-201ENST00000560870 ERCC6Q03468 1493 aa22.5■■□□□ 1.19
AC027237.4-201ENST00000560870 NESP48681 1621 aa22.46■■□□□ 1.19
AC027237.4-201ENST00000560870 WIZO95785 1651 aa22.45■■□□□ 1.18
AC027237.4-201ENST00000560870 CUX2O14529 1486 aa22.34■■□□□ 1.17
AC027237.4-201ENST00000560870 LAMC3Q9Y6N6 1575 aa22.34■■□□□ 1.17
AC027237.4-201ENST00000560870 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
AC027237.4-201ENST00000560870 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
AC027237.4-201ENST00000560870 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
AC027237.4-201ENST00000560870 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
AC027237.4-201ENST00000560870 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
AC027237.4-201ENST00000560870 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
AC027237.4-201ENST00000560870 DNAJC5Q9H3Z4 198 aa22.08■■□□□ 1.13
AC027237.4-201ENST00000560870 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
AC027237.4-201ENST00000560870 CFTRP13569 1480 aa21.97■■□□□ 1.11
AC027237.4-201ENST00000560870 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
AC027237.4-201ENST00000560870 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
AC027237.4-201ENST00000560870 WDR62O43379 1518 aa21.92■■□□□ 1.1
AC027237.4-201ENST00000560870 PRDM2Q13029 1718 aa21.89■■□□□ 1.1
AC027237.4-201ENST00000560870 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
AC027237.4-201ENST00000560870 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
AC027237.4-201ENST00000560870 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
AC027237.4-201ENST00000560870 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
AC027237.4-201ENST00000560870 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
AC027237.4-201ENST00000560870 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
AC027237.4-201ENST00000560870 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
AC027237.4-201ENST00000560870 ZNF608Q9ULD9 1512 aaPredicted RBP21.44■■□□□ 1.02
AC027237.4-201ENST00000560870 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
AC027237.4-201ENST00000560870 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
AC027237.4-201ENST00000560870 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
AC027237.4-201ENST00000560870 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
AC027237.4-201ENST00000560870 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 1
AC027237.4-201ENST00000560870 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
AC027237.4-201ENST00000560870 TRIM41Q8WV44 630 aa21.27■■□□□ 1
AC027237.4-201ENST00000560870 CUX1P39880 1505 aa21.27■■□□□ 1
AC027237.4-201ENST00000560870 SOGA1O94964 1423 aa21.27■■□□□ 1
AC027237.4-201ENST00000560870 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
AC027237.4-201ENST00000560870 CHD1O14646 1710 aa21.21■□□□□ 0.99
AC027237.4-201ENST00000560870 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
AC027237.4-201ENST00000560870 FBLN2P98095 1184 aa21.15■□□□□ 0.98
AC027237.4-201ENST00000560870 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
AC027237.4-201ENST00000560870 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
AC027237.4-201ENST00000560870 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
AC027237.4-201ENST00000560870 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
AC027237.4-201ENST00000560870 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
AC027237.4-201ENST00000560870 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
AC027237.4-201ENST00000560870 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
AC027237.4-201ENST00000560870 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
AC027237.4-201ENST00000560870 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
AC027237.4-201ENST00000560870 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
AC027237.4-201ENST00000560870 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
AC027237.4-201ENST00000560870 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
AC027237.4-201ENST00000560870 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
AC027237.4-201ENST00000560870 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
AC027237.4-201ENST00000560870 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
AC027237.4-201ENST00000560870 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
AC027237.4-201ENST00000560870 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
AC027237.4-201ENST00000560870 AEBP2Q6ZN18 517 aaPredicted RBP20.98■□□□□ 0.95
AC027237.4-201ENST00000560870 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
AC027237.4-201ENST00000560870 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
AC027237.4-201ENST00000560870 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
AC027237.4-201ENST00000560870 ARAP1Q96P48 1450 aa20.82■□□□□ 0.92
AC027237.4-201ENST00000560870 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
AC027237.4-201ENST00000560870 GRIN2AQ12879 1464 aa20.78■□□□□ 0.92
AC027237.4-201ENST00000560870 ERICH3Q5RHP9 1530 aa20.77■□□□□ 0.92
AC027237.4-201ENST00000560870 FHAD1B1AJZ9 1412 aa20.74■□□□□ 0.91
AC027237.4-201ENST00000560870 CEP170Q5SW79 1584 aa20.71■□□□□ 0.91
AC027237.4-201ENST00000560870 NUP160Q12769 1436 aa20.67■□□□□ 0.9
AC027237.4-201ENST00000560870 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
AC027237.4-201ENST00000560870 ERCC6L2Q5T890 1561 aa20.6■□□□□ 0.89
AC027237.4-201ENST00000560870 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
AC027237.4-201ENST00000560870 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
AC027237.4-201ENST00000560870 IGF1RP08069 1367 aa20.55■□□□□ 0.88
AC027237.4-201ENST00000560870 CUL7Q14999 1698 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms