RNA–Protein interactions for RNA: ENST00000560681.1

B2M-210, Transcript of beta-2-microglobulin, humanhuman

TSL 4

Gene B2M, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
B2M-210ENST00000560681 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
B2M-210ENST00000560681 ABCC9O60706 1549 aa35.78■■■■□ 3.32
B2M-210ENST00000560681 CCDC180Q9P1Z9 1646 aa34.67■■■■□ 3.14
B2M-210ENST00000560681 DNAJC5BQ9UF47 199 aa34.57■■■■□ 3.12
B2M-210ENST00000560681 RB1CC1Q8TDY2 1594 aa33.54■■■□□ 2.96
B2M-210ENST00000560681 PABPN1Q86U42 306 aaKnown RBP eCLIP33.27■■■□□ 2.92
B2M-210ENST00000560681 NACADO15069 1562 aa33.09■■■□□ 2.89
B2M-210ENST00000560681 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
B2M-210ENST00000560681 UNC13AQ9UPW8 1703 aa32.73■■■□□ 2.83
B2M-210ENST00000560681 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
B2M-210ENST00000560681 DNAJC5Q9H3Z4 198 aa32.38■■■□□ 2.77
B2M-210ENST00000560681 MYO15BQ96JP2 1530 aa32.32■■■□□ 2.76
B2M-210ENST00000560681 CECR2Q9BXF3 1484 aa32.31■■■□□ 2.76
B2M-210ENST00000560681 CC2D2AQ9P2K1 1620 aa32.22■■■□□ 2.75
B2M-210ENST00000560681 SHROOM4Q9ULL8 1493 aa32.02■■■□□ 2.72
B2M-210ENST00000560681 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
B2M-210ENST00000560681 SCRIBQ14160 1630 aa31.62■■■□□ 2.65
B2M-210ENST00000560681 DCAF1Q9Y4B6 1507 aa31.56■■■□□ 2.64
B2M-210ENST00000560681 ZCCHC6Q5VYS8 1495 aaKnown RBP31.53■■■□□ 2.64
B2M-210ENST00000560681 CUX2O14529 1486 aa31.17■■■□□ 2.58
B2M-210ENST00000560681 ERCC6Q03468 1493 aa30.91■■■□□ 2.54
B2M-210ENST00000560681 NCAPD3P42695 1498 aa30.64■■■□□ 2.5
B2M-210ENST00000560681 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
B2M-210ENST00000560681 NESP48681 1621 aa30.48■■■□□ 2.47
B2M-210ENST00000560681 ATAD2BQ9ULI0 1458 aa30.41■■■□□ 2.46
B2M-210ENST00000560681 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
B2M-210ENST00000560681 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
B2M-210ENST00000560681 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
B2M-210ENST00000560681 SMARCA4P51532 1647 aa30.06■■■□□ 2.4
B2M-210ENST00000560681 BAZ1BQ9UIG0 1483 aaKnown RBP30.01■■■□□ 2.4
B2M-210ENST00000560681 LAMC3Q9Y6N6 1575 aa30■■■□□ 2.39
B2M-210ENST00000560681 PDS5BQ9NTI5 1447 aa29.94■■■□□ 2.38
B2M-210ENST00000560681 KIF21AQ7Z4S6 1674 aa29.93■■■□□ 2.38
B2M-210ENST00000560681 PEG3Q9GZU2 1588 aa29.77■■■□□ 2.36
B2M-210ENST00000560681 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
B2M-210ENST00000560681 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
B2M-210ENST00000560681 MRC2Q9UBG0 1479 aa29.71■■■□□ 2.35
B2M-210ENST00000560681 CADPSQ9ULU8 1353 aa29.69■■■□□ 2.34
B2M-210ENST00000560681 WDR62O43379 1518 aa29.64■■■□□ 2.34
B2M-210ENST00000560681 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
B2M-210ENST00000560681 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
B2M-210ENST00000560681 FANCD2Q9BXW9 1451 aa29.3■■■□□ 2.28
B2M-210ENST00000560681 RIMBP3CA6NJZ7 1639 aa29.3■■■□□ 2.28
B2M-210ENST00000560681 RIMBP3BA6NNM3 1639 aa29.3■■■□□ 2.28
B2M-210ENST00000560681 RIMBP3Q9UFD9 1639 aa29.3■■■□□ 2.28
B2M-210ENST00000560681 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.25
B2M-210ENST00000560681 ARHGEF11O15085 1522 aa29.13■■■□□ 2.25
B2M-210ENST00000560681 WIZO95785 1651 aa29.12■■■□□ 2.25
B2M-210ENST00000560681 CFTRP13569 1480 aa29.11■■■□□ 2.25
B2M-210ENST00000560681 CYB5RLQ6IPT4 315 aa29.11■■■□□ 2.25
B2M-210ENST00000560681 TRHP20396 242 aaPredicted RBP29.06■■■□□ 2.24
B2M-210ENST00000560681 ZNF608Q9ULD9 1512 aaPredicted RBP28.96■■■□□ 2.23
B2M-210ENST00000560681 AEBP2Q6ZN18 517 aaPredicted RBP28.9■■■□□ 2.22
B2M-210ENST00000560681 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
B2M-210ENST00000560681 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
B2M-210ENST00000560681 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.18
B2M-210ENST00000560681 TOPBP1Q92547 1522 aa28.64■■■□□ 2.17
B2M-210ENST00000560681 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
B2M-210ENST00000560681 FBLN2P98095 1184 aa28.63■■■□□ 2.17
B2M-210ENST00000560681 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
B2M-210ENST00000560681 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.171e-9■■■■□ 20.3
B2M-210ENST00000560681 CHD1O14646 1710 aa28.58■■■□□ 2.17
B2M-210ENST00000560681 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
B2M-210ENST00000560681 ABCC8Q09428 1581 aa28.48■■■□□ 2.15
B2M-210ENST00000560681 CCDC88BA6NC98 1476 aa28.43■■■□□ 2.14
B2M-210ENST00000560681 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
B2M-210ENST00000560681 DNMBPQ6XZF7 1577 aa28.39■■■□□ 2.14
B2M-210ENST00000560681 CLASP1Q7Z460 1538 aa28.29■■■□□ 2.12
B2M-210ENST00000560681 POLA1P09884 1462 aaPredicted RBP28.29■■■□□ 2.12
B2M-210ENST00000560681 TDRD9Q8NDG6 1382 aaKnown RBP28.29■■■□□ 2.12
B2M-210ENST00000560681 RAD54L2Q9Y4B4 1467 aa28.26■■■□□ 2.11
B2M-210ENST00000560681 CHMP7Q8WUX9 453 aaPredicted RBP28.25■■■□□ 2.11
B2M-210ENST00000560681 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
B2M-210ENST00000560681 SOGA1O94964 1423 aa28.19■■■□□ 2.1
B2M-210ENST00000560681 SYNJ1O43426 1573 aa28.15■■■□□ 2.1
B2M-210ENST00000560681 GAPVD1Q14C86 1478 aa28.1■■■□□ 2.09
B2M-210ENST00000560681 MAGI1Q96QZ7 1491 aaPredicted RBP28.07■■■□□ 2.08
B2M-210ENST00000560681 SYNJ2O15056 1496 aa28.01■■■□□ 2.07
B2M-210ENST00000560681 GRIN2BQ13224 1484 aa28■■■□□ 2.07
B2M-210ENST00000560681 WDR97A6NE52 1622 aa27.99■■■□□ 2.07
B2M-210ENST00000560681 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
B2M-210ENST00000560681 ERCC6L2Q5T890 1561 aa27.84■■■□□ 2.05
B2M-210ENST00000560681 ILDR1Q86SU0 546 aaPredicted RBP27.81■■■□□ 2.04
B2M-210ENST00000560681 CUX1P39880 1505 aa27.81■■■□□ 2.04
B2M-210ENST00000560681 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
B2M-210ENST00000560681 KDM4FA0A1W2PPD8 638 aa27.68■■■□□ 2.02
B2M-210ENST00000560681 KIF13AQ9H1H9 1805 aa27.67■■■□□ 2.02
B2M-210ENST00000560681 CEP170Q5SW79 1584 aa27.66■■■□□ 2.02
B2M-210ENST00000560681 GRIN2AQ12879 1464 aa27.63■■■□□ 2.01
B2M-210ENST00000560681 NUP160Q12769 1436 aa27.6■■■□□ 2.01
B2M-210ENST00000560681 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
B2M-210ENST00000560681 FAM69CQ0P6D2 419 aa27.59■■■□□ 2.01
B2M-210ENST00000560681 ABCA5Q8WWZ7 1642 aa27.58■■■□□ 2.01
B2M-210ENST00000560681 SHROOM2Q13796 1616 aa27.52■■■□□ 2
B2M-210ENST00000560681 ABCC10Q5T3U5 1492 aa27.49■■□□□ 1.99
B2M-210ENST00000560681 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
B2M-210ENST00000560681 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
B2M-210ENST00000560681 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
B2M-210ENST00000560681 NPM1P06748 294 aaKnown RBP eCLIP27.41■■□□□ 1.98
B2M-210ENST00000560681 FHAD1B1AJZ9 1412 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms