RNA–Protein interactions for RNA: ENST00000560605.1

PRC1-218, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 4

Gene PRC1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-218ENST00000560605 NISCHQ9Y2I1 1504 aa32.76■■■□□ 2.83
PRC1-218ENST00000560605 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
PRC1-218ENST00000560605 ABCC9O60706 1549 aa28.45■■■□□ 2.15
PRC1-218ENST00000560605 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
PRC1-218ENST00000560605 NACADO15069 1562 aa27.37■■□□□ 1.97
PRC1-218ENST00000560605 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
PRC1-218ENST00000560605 ZCCHC6Q5VYS8 1495 aaKnown RBP27.31■■□□□ 1.96
PRC1-218ENST00000560605 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
PRC1-218ENST00000560605 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
PRC1-218ENST00000560605 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
PRC1-218ENST00000560605 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
PRC1-218ENST00000560605 PABPN1Q86U42 306 aaKnown RBP eCLIP26.57■■□□□ 1.84
PRC1-218ENST00000560605 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
PRC1-218ENST00000560605 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
PRC1-218ENST00000560605 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
PRC1-218ENST00000560605 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
PRC1-218ENST00000560605 CC2D2AQ9P2K1 1620 aa25.76■■□□□ 1.71
PRC1-218ENST00000560605 CECR2Q9BXF3 1484 aa25.56■■□□□ 1.68
PRC1-218ENST00000560605 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
PRC1-218ENST00000560605 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.66
PRC1-218ENST00000560605 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
PRC1-218ENST00000560605 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
PRC1-218ENST00000560605 MROH2BQ7Z745 1585 aa25.25■■□□□ 1.63
PRC1-218ENST00000560605 NCAPD3P42695 1498 aa25.22■■□□□ 1.63
PRC1-218ENST00000560605 PEG3Q9GZU2 1588 aa25.17■■□□□ 1.62
PRC1-218ENST00000560605 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
PRC1-218ENST00000560605 BAZ1BQ9UIG0 1483 aaKnown RBP25.07■■□□□ 1.6
PRC1-218ENST00000560605 WIZO95785 1651 aa25■■□□□ 1.59
PRC1-218ENST00000560605 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.59
PRC1-218ENST00000560605 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
PRC1-218ENST00000560605 NESP48681 1621 aa24.64■■□□□ 1.53
PRC1-218ENST00000560605 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
PRC1-218ENST00000560605 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
PRC1-218ENST00000560605 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
PRC1-218ENST00000560605 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
PRC1-218ENST00000560605 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
PRC1-218ENST00000560605 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
PRC1-218ENST00000560605 CFTRP13569 1480 aa24.36■■□□□ 1.49
PRC1-218ENST00000560605 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
PRC1-218ENST00000560605 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
PRC1-218ENST00000560605 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
PRC1-218ENST00000560605 CUX2O14529 1486 aa24.26■■□□□ 1.47
PRC1-218ENST00000560605 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
PRC1-218ENST00000560605 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
PRC1-218ENST00000560605 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
PRC1-218ENST00000560605 WDR62O43379 1518 aa24.1■■□□□ 1.45
PRC1-218ENST00000560605 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
PRC1-218ENST00000560605 TOPBP1Q92547 1522 aa23.86■■□□□ 1.41
PRC1-218ENST00000560605 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
PRC1-218ENST00000560605 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
PRC1-218ENST00000560605 CUX1P39880 1505 aa23.7■■□□□ 1.38
PRC1-218ENST00000560605 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
PRC1-218ENST00000560605 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
PRC1-218ENST00000560605 FGD5Q6ZNL6 1462 aa23.61■■□□□ 1.37
PRC1-218ENST00000560605 TARBP1Q13395 1621 aaKnown RBP23.6■■□□□ 1.37
PRC1-218ENST00000560605 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
PRC1-218ENST00000560605 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
PRC1-218ENST00000560605 SOGA1O94964 1423 aa23.53■■□□□ 1.36
PRC1-218ENST00000560605 WRNQ14191 1432 aaPredicted RBP eCLIP23.53■■□□□ 1.36
PRC1-218ENST00000560605 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
PRC1-218ENST00000560605 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
PRC1-218ENST00000560605 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
PRC1-218ENST00000560605 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
PRC1-218ENST00000560605 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
PRC1-218ENST00000560605 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.348e-7■■■■■ 59.6
PRC1-218ENST00000560605 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
PRC1-218ENST00000560605 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
PRC1-218ENST00000560605 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
PRC1-218ENST00000560605 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
PRC1-218ENST00000560605 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
PRC1-218ENST00000560605 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
PRC1-218ENST00000560605 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
PRC1-218ENST00000560605 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
PRC1-218ENST00000560605 CHD1O14646 1710 aa23.24■■□□□ 1.31
PRC1-218ENST00000560605 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
PRC1-218ENST00000560605 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
PRC1-218ENST00000560605 FBLN2P98095 1184 aa23.15■■□□□ 1.3
PRC1-218ENST00000560605 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
PRC1-218ENST00000560605 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
PRC1-218ENST00000560605 ADAMTS12P58397 1594 aa23.09■■□□□ 1.29
PRC1-218ENST00000560605 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
PRC1-218ENST00000560605 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
PRC1-218ENST00000560605 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
PRC1-218ENST00000560605 TRIM41Q8WV44 630 aa22.98■■□□□ 1.27
PRC1-218ENST00000560605 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
PRC1-218ENST00000560605 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
PRC1-218ENST00000560605 CUL7Q14999 1698 aa22.93■■□□□ 1.26
PRC1-218ENST00000560605 IGF1RP08069 1367 aa22.92■■□□□ 1.26
PRC1-218ENST00000560605 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
PRC1-218ENST00000560605 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
PRC1-218ENST00000560605 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
PRC1-218ENST00000560605 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
PRC1-218ENST00000560605 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
PRC1-218ENST00000560605 NUP160Q12769 1436 aa22.87■■□□□ 1.25
PRC1-218ENST00000560605 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.25
PRC1-218ENST00000560605 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
PRC1-218ENST00000560605 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
PRC1-218ENST00000560605 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
PRC1-218ENST00000560605 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
PRC1-218ENST00000560605 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms