RNA–Protein interactions for RNA: ENST00000560553.1

MFGE8-213, Transcript of milk fat globule-EGF factor 8 protein, humanhuman

TSL 4

Gene MFGE8, Length 500 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFGE8-213ENST00000560553 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.19
MFGE8-213ENST00000560553 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.81
MFGE8-213ENST00000560553 ABCC9O60706 1549 aa20.02■□□□□ 0.79
MFGE8-213ENST00000560553 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
MFGE8-213ENST00000560553 DCAF8L2P0C7V8 631 aa18.99■□□□□ 0.63
MFGE8-213ENST00000560553 NACADO15069 1562 aa18.98■□□□□ 0.63
MFGE8-213ENST00000560553 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
MFGE8-213ENST00000560553 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
MFGE8-213ENST00000560553 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
MFGE8-213ENST00000560553 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
MFGE8-213ENST00000560553 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
MFGE8-213ENST00000560553 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
MFGE8-213ENST00000560553 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
MFGE8-213ENST00000560553 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
MFGE8-213ENST00000560553 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
MFGE8-213ENST00000560553 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
MFGE8-213ENST00000560553 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
MFGE8-213ENST00000560553 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
MFGE8-213ENST00000560553 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
MFGE8-213ENST00000560553 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
MFGE8-213ENST00000560553 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
MFGE8-213ENST00000560553 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
MFGE8-213ENST00000560553 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
MFGE8-213ENST00000560553 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
MFGE8-213ENST00000560553 MROH2BQ7Z745 1585 aa17.37■□□□□ 0.37
MFGE8-213ENST00000560553 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
MFGE8-213ENST00000560553 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
MFGE8-213ENST00000560553 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
MFGE8-213ENST00000560553 NESP48681 1621 aa17.24■□□□□ 0.35
MFGE8-213ENST00000560553 WIZO95785 1651 aa17.2■□□□□ 0.34
MFGE8-213ENST00000560553 CUX2O14529 1486 aa17.13■□□□□ 0.33
MFGE8-213ENST00000560553 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
MFGE8-213ENST00000560553 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
MFGE8-213ENST00000560553 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
MFGE8-213ENST00000560553 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
MFGE8-213ENST00000560553 PDS5BQ9NTI5 1447 aa17■□□□□ 0.31
MFGE8-213ENST00000560553 CADPSQ9ULU8 1353 aa17■□□□□ 0.31
MFGE8-213ENST00000560553 TOP2AP11388 1531 aaKnown RBP16.97■□□□□ 0.31
MFGE8-213ENST00000560553 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
MFGE8-213ENST00000560553 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
MFGE8-213ENST00000560553 CFTRP13569 1480 aa16.84■□□□□ 0.29
MFGE8-213ENST00000560553 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
MFGE8-213ENST00000560553 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.28
MFGE8-213ENST00000560553 WDR62O43379 1518 aa16.81■□□□□ 0.28
MFGE8-213ENST00000560553 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
MFGE8-213ENST00000560553 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
MFGE8-213ENST00000560553 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
MFGE8-213ENST00000560553 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
MFGE8-213ENST00000560553 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
MFGE8-213ENST00000560553 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
MFGE8-213ENST00000560553 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
MFGE8-213ENST00000560553 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
MFGE8-213ENST00000560553 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
MFGE8-213ENST00000560553 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
MFGE8-213ENST00000560553 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
MFGE8-213ENST00000560553 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
MFGE8-213ENST00000560553 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
MFGE8-213ENST00000560553 RAD54L2Q9Y4B4 1467 aa16.34■□□□□ 0.21
MFGE8-213ENST00000560553 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
MFGE8-213ENST00000560553 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.2
MFGE8-213ENST00000560553 CUX1P39880 1505 aa16.32■□□□□ 0.2
MFGE8-213ENST00000560553 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
MFGE8-213ENST00000560553 SOGA1O94964 1423 aa16.29■□□□□ 0.2
MFGE8-213ENST00000560553 CHD1O14646 1710 aa16.26■□□□□ 0.19
MFGE8-213ENST00000560553 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
MFGE8-213ENST00000560553 FBLN2P98095 1184 aa16.21■□□□□ 0.19
MFGE8-213ENST00000560553 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
MFGE8-213ENST00000560553 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
MFGE8-213ENST00000560553 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
MFGE8-213ENST00000560553 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
MFGE8-213ENST00000560553 SNAPC4Q5SXM2 1469 aa16.18■□□□□ 0.18
MFGE8-213ENST00000560553 ARHGEF11O15085 1522 aa16.14■□□□□ 0.18
MFGE8-213ENST00000560553 GRIN2BQ13224 1484 aa16.13■□□□□ 0.17
MFGE8-213ENST00000560553 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
MFGE8-213ENST00000560553 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
MFGE8-213ENST00000560553 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
MFGE8-213ENST00000560553 SYNJ1O43426 1573 aa16.11■□□□□ 0.17
MFGE8-213ENST00000560553 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
MFGE8-213ENST00000560553 ABCA5Q8WWZ7 1642 aa16.1■□□□□ 0.17
MFGE8-213ENST00000560553 BIVM-ERCC5R4GMW8 1640 aa16.1■□□□□ 0.17
MFGE8-213ENST00000560553 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
MFGE8-213ENST00000560553 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
MFGE8-213ENST00000560553 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
MFGE8-213ENST00000560553 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
MFGE8-213ENST00000560553 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
MFGE8-213ENST00000560553 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
MFGE8-213ENST00000560553 ARAP1Q96P48 1450 aa16■□□□□ 0.15
MFGE8-213ENST00000560553 ADAMTS12P58397 1594 aa15.97■□□□□ 0.15
MFGE8-213ENST00000560553 GRIN2AQ12879 1464 aa15.94■□□□□ 0.14
MFGE8-213ENST00000560553 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
MFGE8-213ENST00000560553 FHAD1B1AJZ9 1412 aa15.9■□□□□ 0.14
MFGE8-213ENST00000560553 CEP170Q5SW79 1584 aa15.89■□□□□ 0.13
MFGE8-213ENST00000560553 NUP160Q12769 1436 aa15.85■□□□□ 0.13
MFGE8-213ENST00000560553 ERCC6L2Q5T890 1561 aa15.83■□□□□ 0.12
MFGE8-213ENST00000560553 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
MFGE8-213ENST00000560553 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
MFGE8-213ENST00000560553 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
MFGE8-213ENST00000560553 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
MFGE8-213ENST00000560553 IGF1RP08069 1367 aa15.74■□□□□ 0.11
MFGE8-213ENST00000560553 CUL7Q14999 1698 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms