RNA–Protein interactions for RNA: ENST00000560518.1

CERNA1-202, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 2 BASIC

Gene CERNA1, Length 1,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-202ENST00000560518 NISCHQ9Y2I1 1504 aa36.72■■■■□ 3.47
CERNA1-202ENST00000560518 CCDC180Q9P1Z9 1646 aa32.09■■■□□ 2.73
CERNA1-202ENST00000560518 ZCCHC6Q5VYS8 1495 aaKnown RBP30.78■■■□□ 2.52
CERNA1-202ENST00000560518 ABCC9O60706 1549 aa30.71■■■□□ 2.51
CERNA1-202ENST00000560518 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
CERNA1-202ENST00000560518 DCAF1Q9Y4B6 1507 aa30.33■■■□□ 2.45
CERNA1-202ENST00000560518 MYO15BQ96JP2 1530 aa30.08■■■□□ 2.41
CERNA1-202ENST00000560518 NACADO15069 1562 aa30■■■□□ 2.39
CERNA1-202ENST00000560518 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
CERNA1-202ENST00000560518 SHROOM4Q9ULL8 1493 aa29.78■■■□□ 2.36
CERNA1-202ENST00000560518 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
CERNA1-202ENST00000560518 UNC13AQ9UPW8 1703 aa29.19■■■□□ 2.26
CERNA1-202ENST00000560518 BICRAQ9NZM4 1560 aa28.95■■■□□ 2.23
CERNA1-202ENST00000560518 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
CERNA1-202ENST00000560518 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
CERNA1-202ENST00000560518 SUPT5HO00267 1087 aaKnown RBP28.5■■■□□ 2.15
CERNA1-202ENST00000560518 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
CERNA1-202ENST00000560518 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
CERNA1-202ENST00000560518 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
CERNA1-202ENST00000560518 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
CERNA1-202ENST00000560518 WIZO95785 1651 aa28.1■■■□□ 2.09
CERNA1-202ENST00000560518 EIF4G1Q04637 1599 aaKnown RBP28.1■■■□□ 2.09
CERNA1-202ENST00000560518 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
CERNA1-202ENST00000560518 ATAD2BQ9ULI0 1458 aa27.91■■■□□ 2.06
CERNA1-202ENST00000560518 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
CERNA1-202ENST00000560518 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
CERNA1-202ENST00000560518 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
CERNA1-202ENST00000560518 NCAPD3P42695 1498 aa27.72■■■□□ 2.03
CERNA1-202ENST00000560518 BAZ1BQ9UIG0 1483 aaKnown RBP27.72■■■□□ 2.03
CERNA1-202ENST00000560518 HMGXB3Q12766 1538 aa27.62■■■□□ 2.01
CERNA1-202ENST00000560518 CCDC88BA6NC98 1476 aa27.54■■■□□ 2
CERNA1-202ENST00000560518 DNAJC5BQ9UF47 199 aa27.43■■□□□ 1.98
CERNA1-202ENST00000560518 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
CERNA1-202ENST00000560518 CFTRP13569 1480 aa27.02■■□□□ 1.92
CERNA1-202ENST00000560518 CADPSQ9ULU8 1353 aa27■■□□□ 1.91
CERNA1-202ENST00000560518 NESP48681 1621 aa26.88■■□□□ 1.89
CERNA1-202ENST00000560518 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
CERNA1-202ENST00000560518 TRIM41Q8WV44 630 aa26.8■■□□□ 1.88
CERNA1-202ENST00000560518 LAMC3Q9Y6N6 1575 aa26.79■■□□□ 1.88
CERNA1-202ENST00000560518 PRDM2Q13029 1718 aa26.77■■□□□ 1.88
CERNA1-202ENST00000560518 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
CERNA1-202ENST00000560518 FANCD2Q9BXW9 1451 aa26.69■■□□□ 1.86
CERNA1-202ENST00000560518 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
CERNA1-202ENST00000560518 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
CERNA1-202ENST00000560518 CUX1P39880 1505 aa26.54■■□□□ 1.84
CERNA1-202ENST00000560518 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
CERNA1-202ENST00000560518 TOP2BQ02880 1626 aa26.51■■□□□ 1.83
CERNA1-202ENST00000560518 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
CERNA1-202ENST00000560518 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
CERNA1-202ENST00000560518 URB2Q14146 1524 aaKnown RBP26.38■■□□□ 1.81
CERNA1-202ENST00000560518 TOPBP1Q92547 1522 aa26.37■■□□□ 1.81
CERNA1-202ENST00000560518 DNMBPQ6XZF7 1577 aa26.37■■□□□ 1.81
CERNA1-202ENST00000560518 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
CERNA1-202ENST00000560518 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.8
CERNA1-202ENST00000560518 SOGA1O94964 1423 aa26.31■■□□□ 1.8
CERNA1-202ENST00000560518 FGD5Q6ZNL6 1462 aa26.29■■□□□ 1.8
CERNA1-202ENST00000560518 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
CERNA1-202ENST00000560518 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
CERNA1-202ENST00000560518 POLA1P09884 1462 aaPredicted RBP26.22■■□□□ 1.79
CERNA1-202ENST00000560518 WDR62O43379 1518 aa26.16■■□□□ 1.78
CERNA1-202ENST00000560518 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
CERNA1-202ENST00000560518 RAD54L2Q9Y4B4 1467 aa26.15■■□□□ 1.78
CERNA1-202ENST00000560518 EEA1Q15075 1411 aa26.13■■□□□ 1.77
CERNA1-202ENST00000560518 LOC105371045A0A1W2PR82 267 aa26.09■■□□□ 1.77
CERNA1-202ENST00000560518 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
CERNA1-202ENST00000560518 CUX2O14529 1486 aa26.07■■□□□ 1.76
CERNA1-202ENST00000560518 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
CERNA1-202ENST00000560518 ABCA10Q8WWZ4 1543 aa26.05■■□□□ 1.76
CERNA1-202ENST00000560518 TARBP1Q13395 1621 aaKnown RBP25.98■■□□□ 1.75
CERNA1-202ENST00000560518 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
CERNA1-202ENST00000560518 WDR97A6NE52 1622 aa25.96■■□□□ 1.75
CERNA1-202ENST00000560518 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
CERNA1-202ENST00000560518 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
CERNA1-202ENST00000560518 IGF1RP08069 1367 aa25.89■■□□□ 1.74
CERNA1-202ENST00000560518 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
CERNA1-202ENST00000560518 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.73
CERNA1-202ENST00000560518 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
CERNA1-202ENST00000560518 AQRO60306 1485 aaKnown RBP eCLIP25.81■■□□□ 1.72
CERNA1-202ENST00000560518 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
CERNA1-202ENST00000560518 KIF21BO75037 1637 aa25.8■■□□□ 1.72
CERNA1-202ENST00000560518 RAPGEF2Q9Y4G8 1499 aa25.78■■□□□ 1.72
CERNA1-202ENST00000560518 GOLGA3Q08378 1498 aa25.76■■□□□ 1.72
CERNA1-202ENST00000560518 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
CERNA1-202ENST00000560518 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
CERNA1-202ENST00000560518 UBTFP17480 764 aaKnown RBP25.71■■□□□ 1.71
CERNA1-202ENST00000560518 EIF4G3O43432 1585 aaKnown RBP25.7■■□□□ 1.7
CERNA1-202ENST00000560518 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
CERNA1-202ENST00000560518 PBRM1Q86U86 1689 aa25.66■■□□□ 1.7
CERNA1-202ENST00000560518 TNIKQ9UKE5 1360 aa25.64■■□□□ 1.7
CERNA1-202ENST00000560518 CUL7Q14999 1698 aa25.64■■□□□ 1.7
CERNA1-202ENST00000560518 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
CERNA1-202ENST00000560518 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
CERNA1-202ENST00000560518 ADAMTS12P58397 1594 aa25.53■■□□□ 1.68
CERNA1-202ENST00000560518 CEP162Q5TB80 1403 aa25.5■■□□□ 1.67
CERNA1-202ENST00000560518 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
CERNA1-202ENST00000560518 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
CERNA1-202ENST00000560518 SYNJ2O15056 1496 aa25.39■■□□□ 1.66
CERNA1-202ENST00000560518 CHMP7Q8WUX9 453 aaPredicted RBP25.37■■□□□ 1.65
CERNA1-202ENST00000560518 CLIP1P30622 1438 aa25.36■■□□□ 1.65
CERNA1-202ENST00000560518 GRIN2AQ12879 1464 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms