RNA–Protein interactions for RNA: ENST00000560326.1

CINP-208, Transcript of cyclin dependent kinase 2 interacting protein, humanhuman

TSL 5

Gene CINP, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CINP-208ENST00000560326 NISCHQ9Y2I1 1504 aa34.03■■■■□ 3.04
CINP-208ENST00000560326 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
CINP-208ENST00000560326 ABCC9O60706 1549 aa29.4■■■□□ 2.3
CINP-208ENST00000560326 NACADO15069 1562 aa28.41■■■□□ 2.14
CINP-208ENST00000560326 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.14
CINP-208ENST00000560326 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
CINP-208ENST00000560326 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
CINP-208ENST00000560326 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
CINP-208ENST00000560326 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
CINP-208ENST00000560326 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
CINP-208ENST00000560326 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
CINP-208ENST00000560326 SCRIBQ14160 1630 aa27.51■■□□□ 1.99
CINP-208ENST00000560326 PABPN1Q86U42 306 aaKnown RBP eCLIP27.45■■□□□ 1.98
CINP-208ENST00000560326 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
CINP-208ENST00000560326 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
CINP-208ENST00000560326 EIF4G1Q04637 1599 aaKnown RBP26.79■■□□□ 1.88
CINP-208ENST00000560326 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
CINP-208ENST00000560326 CECR2Q9BXF3 1484 aa26.46■■□□□ 1.83
CINP-208ENST00000560326 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
CINP-208ENST00000560326 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
CINP-208ENST00000560326 NCAPD3P42695 1498 aa26.22■■□□□ 1.79
CINP-208ENST00000560326 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
CINP-208ENST00000560326 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
CINP-208ENST00000560326 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
CINP-208ENST00000560326 PEG3Q9GZU2 1588 aa26.18■■□□□ 1.78
CINP-208ENST00000560326 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
CINP-208ENST00000560326 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
CINP-208ENST00000560326 RSF1Q96T23 1441 aaPredicted RBP25.95■■□□□ 1.74
CINP-208ENST00000560326 WIZO95785 1651 aa25.89■■□□□ 1.73
CINP-208ENST00000560326 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
CINP-208ENST00000560326 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
CINP-208ENST00000560326 NESP48681 1621 aa25.47■■□□□ 1.67
CINP-208ENST00000560326 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
CINP-208ENST00000560326 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
CINP-208ENST00000560326 ERCC6Q03468 1493 aa25.34■■□□□ 1.65
CINP-208ENST00000560326 CFTRP13569 1480 aa25.32■■□□□ 1.64
CINP-208ENST00000560326 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
CINP-208ENST00000560326 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
CINP-208ENST00000560326 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
CINP-208ENST00000560326 FANCD2Q9BXW9 1451 aa25.12■■□□□ 1.61
CINP-208ENST00000560326 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
CINP-208ENST00000560326 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
CINP-208ENST00000560326 CUX2O14529 1486 aa25.11■■□□□ 1.61
CINP-208ENST00000560326 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.6
CINP-208ENST00000560326 MRC2Q9UBG0 1479 aa25.03■■□□□ 1.6
CINP-208ENST00000560326 WDR62O43379 1518 aa24.97■■□□□ 1.59
CINP-208ENST00000560326 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
CINP-208ENST00000560326 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
CINP-208ENST00000560326 TOPBP1Q92547 1522 aa24.73■■□□□ 1.55
CINP-208ENST00000560326 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
CINP-208ENST00000560326 CUX1P39880 1505 aa24.57■■□□□ 1.52
CINP-208ENST00000560326 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
CINP-208ENST00000560326 POLA1P09884 1462 aaPredicted RBP24.53■■□□□ 1.52
CINP-208ENST00000560326 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
CINP-208ENST00000560326 FGD5Q6ZNL6 1462 aa24.47■■□□□ 1.51
CINP-208ENST00000560326 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
CINP-208ENST00000560326 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
CINP-208ENST00000560326 SOGA1O94964 1423 aa24.41■■□□□ 1.5
CINP-208ENST00000560326 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
CINP-208ENST00000560326 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
CINP-208ENST00000560326 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
CINP-208ENST00000560326 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
CINP-208ENST00000560326 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
CINP-208ENST00000560326 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
CINP-208ENST00000560326 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
CINP-208ENST00000560326 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.48
CINP-208ENST00000560326 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
CINP-208ENST00000560326 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
CINP-208ENST00000560326 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
CINP-208ENST00000560326 GRIN2BQ13224 1484 aa24.14■■□□□ 1.46
CINP-208ENST00000560326 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
CINP-208ENST00000560326 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
CINP-208ENST00000560326 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
CINP-208ENST00000560326 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
CINP-208ENST00000560326 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
CINP-208ENST00000560326 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
CINP-208ENST00000560326 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
CINP-208ENST00000560326 CHD1O14646 1710 aa23.98■■□□□ 1.43
CINP-208ENST00000560326 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
CINP-208ENST00000560326 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
CINP-208ENST00000560326 FBLN2P98095 1184 aa23.9■■□□□ 1.42
CINP-208ENST00000560326 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
CINP-208ENST00000560326 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.41
CINP-208ENST00000560326 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
CINP-208ENST00000560326 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
CINP-208ENST00000560326 IGF1RP08069 1367 aa23.83■■□□□ 1.41
CINP-208ENST00000560326 CUL7Q14999 1698 aa23.79■■□□□ 1.4
CINP-208ENST00000560326 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
CINP-208ENST00000560326 NUP160Q12769 1436 aa23.75■■□□□ 1.39
CINP-208ENST00000560326 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
CINP-208ENST00000560326 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
CINP-208ENST00000560326 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
CINP-208ENST00000560326 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
CINP-208ENST00000560326 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
CINP-208ENST00000560326 RIMBP3CA6NJZ7 1639 aa23.63■■□□□ 1.37
CINP-208ENST00000560326 RIMBP3BA6NNM3 1639 aa23.63■■□□□ 1.37
CINP-208ENST00000560326 RIMBP3Q9UFD9 1639 aa23.63■■□□□ 1.37
CINP-208ENST00000560326 EEA1Q15075 1411 aa23.59■■□□□ 1.37
CINP-208ENST00000560326 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
CINP-208ENST00000560326 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms