RNA–Protein interactions for RNA: ENST00000560217.5

PSMA4-219, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5 BASIC

Gene PSMA4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-219ENST00000560217 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
PSMA4-219ENST00000560217 CCDC180Q9P1Z9 1646 aa25.29■■□□□ 1.64
PSMA4-219ENST00000560217 ABCC9O60706 1549 aa24.96■■□□□ 1.59
PSMA4-219ENST00000560217 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
PSMA4-219ENST00000560217 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
PSMA4-219ENST00000560217 NACADO15069 1562 aa23.86■■□□□ 1.41
PSMA4-219ENST00000560217 ZCCHC6Q5VYS8 1495 aaKnown RBP23.69■■□□□ 1.38
PSMA4-219ENST00000560217 MYO15BQ96JP2 1530 aa23.68■■□□□ 1.38
PSMA4-219ENST00000560217 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
PSMA4-219ENST00000560217 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
PSMA4-219ENST00000560217 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
PSMA4-219ENST00000560217 UNC13AQ9UPW8 1703 aa23.29■■□□□ 1.32
PSMA4-219ENST00000560217 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
PSMA4-219ENST00000560217 BICRAQ9NZM4 1560 aa23.2■■□□□ 1.3
PSMA4-219ENST00000560217 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
PSMA4-219ENST00000560217 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
PSMA4-219ENST00000560217 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
PSMA4-219ENST00000560217 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
PSMA4-219ENST00000560217 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
PSMA4-219ENST00000560217 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
PSMA4-219ENST00000560217 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
PSMA4-219ENST00000560217 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
PSMA4-219ENST00000560217 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
PSMA4-219ENST00000560217 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
PSMA4-219ENST00000560217 SMARCA2P51531 1590 aa21.98■■□□□ 1.11
PSMA4-219ENST00000560217 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
PSMA4-219ENST00000560217 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
PSMA4-219ENST00000560217 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
PSMA4-219ENST00000560217 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
PSMA4-219ENST00000560217 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
PSMA4-219ENST00000560217 WIZO95785 1651 aa21.69■■□□□ 1.06
PSMA4-219ENST00000560217 NESP48681 1621 aa21.57■■□□□ 1.04
PSMA4-219ENST00000560217 ERCC6Q03468 1493 aa21.51■■□□□ 1.03
PSMA4-219ENST00000560217 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
PSMA4-219ENST00000560217 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
PSMA4-219ENST00000560217 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
PSMA4-219ENST00000560217 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
PSMA4-219ENST00000560217 CUX2O14529 1486 aa21.29■■□□□ 1
PSMA4-219ENST00000560217 CFTRP13569 1480 aa21.26■□□□□ 0.99
PSMA4-219ENST00000560217 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
PSMA4-219ENST00000560217 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
PSMA4-219ENST00000560217 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
PSMA4-219ENST00000560217 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
PSMA4-219ENST00000560217 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
PSMA4-219ENST00000560217 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
PSMA4-219ENST00000560217 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
PSMA4-219ENST00000560217 WDR62O43379 1518 aa21.03■□□□□ 0.96
PSMA4-219ENST00000560217 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
PSMA4-219ENST00000560217 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
PSMA4-219ENST00000560217 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
PSMA4-219ENST00000560217 TOPBP1Q92547 1522 aa20.79■□□□□ 0.92
PSMA4-219ENST00000560217 ABCC8Q09428 1581 aa20.79■□□□□ 0.92
PSMA4-219ENST00000560217 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
PSMA4-219ENST00000560217 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
PSMA4-219ENST00000560217 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
PSMA4-219ENST00000560217 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
PSMA4-219ENST00000560217 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
PSMA4-219ENST00000560217 CUX1P39880 1505 aa20.61■□□□□ 0.89
PSMA4-219ENST00000560217 SOGA1O94964 1423 aa20.58■□□□□ 0.88
PSMA4-219ENST00000560217 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
PSMA4-219ENST00000560217 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
PSMA4-219ENST00000560217 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
PSMA4-219ENST00000560217 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.884e-7■■■■□ 26.1
PSMA4-219ENST00000560217 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
PSMA4-219ENST00000560217 OSCARQ8IYS5 282 aa20.49■□□□□ 0.87
PSMA4-219ENST00000560217 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
PSMA4-219ENST00000560217 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
PSMA4-219ENST00000560217 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
PSMA4-219ENST00000560217 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
PSMA4-219ENST00000560217 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
PSMA4-219ENST00000560217 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
PSMA4-219ENST00000560217 FBLN2P98095 1184 aa20.34■□□□□ 0.85
PSMA4-219ENST00000560217 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
PSMA4-219ENST00000560217 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
PSMA4-219ENST00000560217 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
PSMA4-219ENST00000560217 SNAPC4Q5SXM2 1469 aa20.29■□□□□ 0.84
PSMA4-219ENST00000560217 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
PSMA4-219ENST00000560217 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
PSMA4-219ENST00000560217 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
PSMA4-219ENST00000560217 CHD1O14646 1710 aa20.22■□□□□ 0.83
PSMA4-219ENST00000560217 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
PSMA4-219ENST00000560217 PBRM1Q86U86 1689 aa20.17■□□□□ 0.82
PSMA4-219ENST00000560217 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
PSMA4-219ENST00000560217 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.81
PSMA4-219ENST00000560217 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
PSMA4-219ENST00000560217 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
PSMA4-219ENST00000560217 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
PSMA4-219ENST00000560217 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
PSMA4-219ENST00000560217 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
PSMA4-219ENST00000560217 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
PSMA4-219ENST00000560217 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
PSMA4-219ENST00000560217 GRIN2AQ12879 1464 aa20.04■□□□□ 0.8
PSMA4-219ENST00000560217 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
PSMA4-219ENST00000560217 IGF1RP08069 1367 aa20.01■□□□□ 0.79
PSMA4-219ENST00000560217 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
PSMA4-219ENST00000560217 NUP160Q12769 1436 aa19.96■□□□□ 0.79
PSMA4-219ENST00000560217 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
PSMA4-219ENST00000560217 ARAP1Q96P48 1450 aa19.91■□□□□ 0.78
PSMA4-219ENST00000560217 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
PSMA4-219ENST00000560217 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms