RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
AC104041.1-202ENST00000560097 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
AC104041.1-202ENST00000560097 ABCC9O60706 1549 aa25.98■■□□□ 1.75
AC104041.1-202ENST00000560097 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
AC104041.1-202ENST00000560097 NACADO15069 1562 aa24.67■■□□□ 1.54
AC104041.1-202ENST00000560097 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
AC104041.1-202ENST00000560097 UNC13AQ9UPW8 1703 aa24.46■■□□□ 1.51
AC104041.1-202ENST00000560097 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
AC104041.1-202ENST00000560097 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
AC104041.1-202ENST00000560097 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
AC104041.1-202ENST00000560097 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
AC104041.1-202ENST00000560097 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
AC104041.1-202ENST00000560097 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.46
AC104041.1-202ENST00000560097 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
AC104041.1-202ENST00000560097 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
AC104041.1-202ENST00000560097 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
AC104041.1-202ENST00000560097 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
AC104041.1-202ENST00000560097 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
AC104041.1-202ENST00000560097 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
AC104041.1-202ENST00000560097 ATAD2BQ9ULI0 1458 aa22.82■■□□□ 1.24
AC104041.1-202ENST00000560097 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
AC104041.1-202ENST00000560097 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
AC104041.1-202ENST00000560097 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
AC104041.1-202ENST00000560097 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
AC104041.1-202ENST00000560097 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
AC104041.1-202ENST00000560097 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
AC104041.1-202ENST00000560097 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
AC104041.1-202ENST00000560097 NESP48681 1621 aa22.49■■□□□ 1.19
AC104041.1-202ENST00000560097 WIZO95785 1651 aa22.46■■□□□ 1.19
AC104041.1-202ENST00000560097 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
AC104041.1-202ENST00000560097 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
AC104041.1-202ENST00000560097 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
AC104041.1-202ENST00000560097 THOC2Q8NI27 1593 aaKnown RBP22.22■■□□□ 1.15
AC104041.1-202ENST00000560097 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.15
AC104041.1-202ENST00000560097 CUX2O14529 1486 aa22.2■■□□□ 1.14
AC104041.1-202ENST00000560097 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
AC104041.1-202ENST00000560097 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
AC104041.1-202ENST00000560097 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
AC104041.1-202ENST00000560097 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
AC104041.1-202ENST00000560097 CFTRP13569 1480 aa21.96■■□□□ 1.11
AC104041.1-202ENST00000560097 WDR62O43379 1518 aa21.9■■□□□ 1.1
AC104041.1-202ENST00000560097 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
AC104041.1-202ENST00000560097 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
AC104041.1-202ENST00000560097 DNAJC5Q9H3Z4 198 aa21.88■■□□□ 1.09
AC104041.1-202ENST00000560097 FANCD2Q9BXW9 1451 aa21.87■■□□□ 1.09
AC104041.1-202ENST00000560097 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
AC104041.1-202ENST00000560097 PRDM2Q13029 1718 aa21.8■■□□□ 1.08
AC104041.1-202ENST00000560097 URB2Q14146 1524 aaKnown RBP21.79■■□□□ 1.08
AC104041.1-202ENST00000560097 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
AC104041.1-202ENST00000560097 ZNF608Q9ULD9 1512 aaPredicted RBP21.48■■□□□ 1.03
AC104041.1-202ENST00000560097 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
AC104041.1-202ENST00000560097 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
AC104041.1-202ENST00000560097 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
AC104041.1-202ENST00000560097 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
AC104041.1-202ENST00000560097 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
AC104041.1-202ENST00000560097 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
AC104041.1-202ENST00000560097 EIF4G3O43432 1585 aaKnown RBP21.34■■□□□ 1.01
AC104041.1-202ENST00000560097 CUX1P39880 1505 aa21.33■■□□□ 1
AC104041.1-202ENST00000560097 ABCC8Q09428 1581 aa21.31■■□□□ 1
AC104041.1-202ENST00000560097 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
AC104041.1-202ENST00000560097 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.99
AC104041.1-202ENST00000560097 FGD5Q6ZNL6 1462 aa21.23■□□□□ 0.99
AC104041.1-202ENST00000560097 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
AC104041.1-202ENST00000560097 CHD1O14646 1710 aa21.15■□□□□ 0.98
AC104041.1-202ENST00000560097 SOGA1O94964 1423 aa21.14■□□□□ 0.98
AC104041.1-202ENST00000560097 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
AC104041.1-202ENST00000560097 OSCARQ8IYS5 282 aa21.11■□□□□ 0.97
AC104041.1-202ENST00000560097 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
AC104041.1-202ENST00000560097 RIMBP3CA6NJZ7 1639 aa21.05■□□□□ 0.96
AC104041.1-202ENST00000560097 RIMBP3BA6NNM3 1639 aa21.05■□□□□ 0.96
AC104041.1-202ENST00000560097 RIMBP3Q9UFD9 1639 aa21.05■□□□□ 0.96
AC104041.1-202ENST00000560097 SNAPC4Q5SXM2 1469 aa21.03■□□□□ 0.96
AC104041.1-202ENST00000560097 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
AC104041.1-202ENST00000560097 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
AC104041.1-202ENST00000560097 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
AC104041.1-202ENST00000560097 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
AC104041.1-202ENST00000560097 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
AC104041.1-202ENST00000560097 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
AC104041.1-202ENST00000560097 ARHGEF11O15085 1522 aa20.97■□□□□ 0.95
AC104041.1-202ENST00000560097 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
AC104041.1-202ENST00000560097 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
AC104041.1-202ENST00000560097 CLASP1Q7Z460 1538 aa20.93■□□□□ 0.94
AC104041.1-202ENST00000560097 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
AC104041.1-202ENST00000560097 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
AC104041.1-202ENST00000560097 SYNJ2O15056 1496 aa20.85■□□□□ 0.93
AC104041.1-202ENST00000560097 ARAP1Q96P48 1450 aa20.85■□□□□ 0.93
AC104041.1-202ENST00000560097 FBLN2P98095 1184 aa20.84■□□□□ 0.93
AC104041.1-202ENST00000560097 ADAMTS12P58397 1594 aa20.81■□□□□ 0.92
AC104041.1-202ENST00000560097 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
AC104041.1-202ENST00000560097 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
AC104041.1-202ENST00000560097 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
AC104041.1-202ENST00000560097 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
AC104041.1-202ENST00000560097 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
AC104041.1-202ENST00000560097 NUP160Q12769 1436 aa20.68■□□□□ 0.9
AC104041.1-202ENST00000560097 CYB5RLQ6IPT4 315 aa20.65■□□□□ 0.9
AC104041.1-202ENST00000560097 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
AC104041.1-202ENST00000560097 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
AC104041.1-202ENST00000560097 RUSC2Q8N2Y8 1516 aa20.53■□□□□ 0.88
AC104041.1-202ENST00000560097 IGF1RP08069 1367 aa20.52■□□□□ 0.88
AC104041.1-202ENST00000560097 CUL7Q14999 1698 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms