RNA–Protein interactions for RNA: ENST00000559983.5

SEMA4B-213, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-213ENST00000559983 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
SEMA4B-213ENST00000559983 CCDC180Q9P1Z9 1646 aa30.57■■■□□ 2.48
SEMA4B-213ENST00000559983 ABCC9O60706 1549 aa29.98■■■□□ 2.39
SEMA4B-213ENST00000559983 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
SEMA4B-213ENST00000559983 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
SEMA4B-213ENST00000559983 NACADO15069 1562 aa28.77■■■□□ 2.2
SEMA4B-213ENST00000559983 RB1CC1Q8TDY2 1594 aa28.77■■■□□ 2.2
SEMA4B-213ENST00000559983 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
SEMA4B-213ENST00000559983 DCAF1Q9Y4B6 1507 aa28.55■■■□□ 2.16
SEMA4B-213ENST00000559983 PABPN1Q86U42 306 aaKnown RBP eCLIP28.14■■■□□ 2.1
SEMA4B-213ENST00000559983 UNC13AQ9UPW8 1703 aa28.11■■■□□ 2.09
SEMA4B-213ENST00000559983 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
SEMA4B-213ENST00000559983 BICRAQ9NZM4 1560 aa27.95■■■□□ 2.07
SEMA4B-213ENST00000559983 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
SEMA4B-213ENST00000559983 DNAJC5BQ9UF47 199 aa27.49■■□□□ 1.99
SEMA4B-213ENST00000559983 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
SEMA4B-213ENST00000559983 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
SEMA4B-213ENST00000559983 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
SEMA4B-213ENST00000559983 SMARCA4P51532 1647 aa26.79■■□□□ 1.88
SEMA4B-213ENST00000559983 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
SEMA4B-213ENST00000559983 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
SEMA4B-213ENST00000559983 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
SEMA4B-213ENST00000559983 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
SEMA4B-213ENST00000559983 SMARCA2P51531 1590 aa26.56■■□□□ 1.84
SEMA4B-213ENST00000559983 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
SEMA4B-213ENST00000559983 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
SEMA4B-213ENST00000559983 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
SEMA4B-213ENST00000559983 WIZO95785 1651 aa26.41■■□□□ 1.82
SEMA4B-213ENST00000559983 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
SEMA4B-213ENST00000559983 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
SEMA4B-213ENST00000559983 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
SEMA4B-213ENST00000559983 NESP48681 1621 aa25.99■■□□□ 1.75
SEMA4B-213ENST00000559983 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
SEMA4B-213ENST00000559983 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
SEMA4B-213ENST00000559983 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
SEMA4B-213ENST00000559983 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
SEMA4B-213ENST00000559983 CFTRP13569 1480 aa25.71■■□□□ 1.71
SEMA4B-213ENST00000559983 PDS5BQ9NTI5 1447 aa25.69■■□□□ 1.7
SEMA4B-213ENST00000559983 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
SEMA4B-213ENST00000559983 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
SEMA4B-213ENST00000559983 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
SEMA4B-213ENST00000559983 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
SEMA4B-213ENST00000559983 MRC2Q9UBG0 1479 aa25.42■■□□□ 1.66
SEMA4B-213ENST00000559983 CUX2O14529 1486 aa25.39■■□□□ 1.65
SEMA4B-213ENST00000559983 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
SEMA4B-213ENST00000559983 WDR62O43379 1518 aa25.3■■□□□ 1.64
SEMA4B-213ENST00000559983 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
SEMA4B-213ENST00000559983 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
SEMA4B-213ENST00000559983 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
SEMA4B-213ENST00000559983 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
SEMA4B-213ENST00000559983 CUX1P39880 1505 aa25.04■■□□□ 1.6
SEMA4B-213ENST00000559983 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
SEMA4B-213ENST00000559983 IFT140Q96RY7 1462 aa24.94■■□□□ 1.58
SEMA4B-213ENST00000559983 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
SEMA4B-213ENST00000559983 WRNQ14191 1432 aaPredicted RBP eCLIP24.93■■□□□ 1.58
SEMA4B-213ENST00000559983 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
SEMA4B-213ENST00000559983 SOGA1O94964 1423 aa24.9■■□□□ 1.58
SEMA4B-213ENST00000559983 ZNF608Q9ULD9 1512 aaPredicted RBP24.89■■□□□ 1.57
SEMA4B-213ENST00000559983 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
SEMA4B-213ENST00000559983 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
SEMA4B-213ENST00000559983 TOP2BQ02880 1626 aa24.8■■□□□ 1.56
SEMA4B-213ENST00000559983 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.562e-7■■■■■ 33.9
SEMA4B-213ENST00000559983 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
SEMA4B-213ENST00000559983 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
SEMA4B-213ENST00000559983 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
SEMA4B-213ENST00000559983 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
SEMA4B-213ENST00000559983 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
SEMA4B-213ENST00000559983 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.52
SEMA4B-213ENST00000559983 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
SEMA4B-213ENST00000559983 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
SEMA4B-213ENST00000559983 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
SEMA4B-213ENST00000559983 FBLN2P98095 1184 aa24.52■■□□□ 1.52
SEMA4B-213ENST00000559983 ABCA5Q8WWZ7 1642 aa24.51■■□□□ 1.51
SEMA4B-213ENST00000559983 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
SEMA4B-213ENST00000559983 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
SEMA4B-213ENST00000559983 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
SEMA4B-213ENST00000559983 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
SEMA4B-213ENST00000559983 MAGI1Q96QZ7 1491 aaPredicted RBP24.42■■□□□ 1.5
SEMA4B-213ENST00000559983 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
SEMA4B-213ENST00000559983 CHD1O14646 1710 aa24.36■■□□□ 1.49
SEMA4B-213ENST00000559983 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
SEMA4B-213ENST00000559983 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
SEMA4B-213ENST00000559983 IGF1RP08069 1367 aa24.33■■□□□ 1.49
SEMA4B-213ENST00000559983 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
SEMA4B-213ENST00000559983 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
SEMA4B-213ENST00000559983 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
SEMA4B-213ENST00000559983 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
SEMA4B-213ENST00000559983 GRIN2AQ12879 1464 aa24.21■■□□□ 1.47
SEMA4B-213ENST00000559983 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
SEMA4B-213ENST00000559983 CLASP1Q7Z460 1538 aa24.11■■□□□ 1.45
SEMA4B-213ENST00000559983 FAM9AQ8IZU1 332 aaPredicted RBP24.11■■□□□ 1.45
SEMA4B-213ENST00000559983 CUL7Q14999 1698 aa24.11■■□□□ 1.45
SEMA4B-213ENST00000559983 NUP160Q12769 1436 aa24.1■■□□□ 1.45
SEMA4B-213ENST00000559983 CEP170Q5SW79 1584 aa24.1■■□□□ 1.45
SEMA4B-213ENST00000559983 CSRNP3Q8WYN3 585 aa24.05■■□□□ 1.44
SEMA4B-213ENST00000559983 ARHGEF11O15085 1522 aa24.02■■□□□ 1.44
SEMA4B-213ENST00000559983 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
SEMA4B-213ENST00000559983 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
SEMA4B-213ENST00000559983 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
SEMA4B-213ENST00000559983 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms