RNA–Protein interactions for RNA: ENST00000559811.1

PRC1-215, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 3

Gene PRC1, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-215ENST00000559811 NISCHQ9Y2I1 1504 aa39.81■■■■□ 3.96
PRC1-215ENST00000559811 CCDC180Q9P1Z9 1646 aa35.67■■■■□ 3.3
PRC1-215ENST00000559811 ABCC9O60706 1549 aa35.35■■■■□ 3.25
PRC1-215ENST00000559811 RB1CC1Q8TDY2 1594 aa33.79■■■■□ 3
PRC1-215ENST00000559811 NACADO15069 1562 aa33.63■■■□□ 2.97
PRC1-215ENST00000559811 DCAF8L2P0C7V8 631 aa33.4■■■□□ 2.94
PRC1-215ENST00000559811 MYO15BQ96JP2 1530 aa33.26■■■□□ 2.91
PRC1-215ENST00000559811 UNC13AQ9UPW8 1703 aa33.18■■■□□ 2.9
PRC1-215ENST00000559811 ZCCHC6Q5VYS8 1495 aaKnown RBP33.03■■■□□ 2.88
PRC1-215ENST00000559811 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
PRC1-215ENST00000559811 PABPN1Q86U42 306 aaKnown RBP eCLIP32.93■■■□□ 2.86
PRC1-215ENST00000559811 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
PRC1-215ENST00000559811 BICRAQ9NZM4 1560 aa32.85■■■□□ 2.85
PRC1-215ENST00000559811 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
PRC1-215ENST00000559811 SHROOM4Q9ULL8 1493 aa32.37■■■□□ 2.77
PRC1-215ENST00000559811 CC2D2AQ9P2K1 1620 aa32■■■□□ 2.71
PRC1-215ENST00000559811 EIF4G1Q04637 1599 aaKnown RBP31.98■■■□□ 2.71
PRC1-215ENST00000559811 CECR2Q9BXF3 1484 aa31.82■■■□□ 2.68
PRC1-215ENST00000559811 NCAPD3P42695 1498 aa31.03■■■□□ 2.56
PRC1-215ENST00000559811 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
PRC1-215ENST00000559811 ATAD2BQ9ULI0 1458 aa30.96■■■□□ 2.55
PRC1-215ENST00000559811 SMARCA2P51531 1590 aa30.89■■■□□ 2.54
PRC1-215ENST00000559811 BAZ1AQ9NRL2 1556 aaPredicted RBP30.87■■■□□ 2.53
PRC1-215ENST00000559811 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
PRC1-215ENST00000559811 PEG3Q9GZU2 1588 aa30.74■■■□□ 2.51
PRC1-215ENST00000559811 MROH2BQ7Z745 1585 aa30.68■■■□□ 2.5
PRC1-215ENST00000559811 BAZ1BQ9UIG0 1483 aaKnown RBP30.64■■■□□ 2.5
PRC1-215ENST00000559811 ERCC6Q03468 1493 aa30.47■■■□□ 2.47
PRC1-215ENST00000559811 NESP48681 1621 aa30.46■■■□□ 2.47
PRC1-215ENST00000559811 CUX2O14529 1486 aa30.38■■■□□ 2.45
PRC1-215ENST00000559811 WIZO95785 1651 aa30.36■■■□□ 2.45
PRC1-215ENST00000559811 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
PRC1-215ENST00000559811 KIF21AQ7Z4S6 1674 aa30.15■■■□□ 2.42
PRC1-215ENST00000559811 THOC2Q8NI27 1593 aaKnown RBP30.14■■■□□ 2.42
PRC1-215ENST00000559811 DNAJC5Q9H3Z4 198 aa30.11■■■□□ 2.41
PRC1-215ENST00000559811 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
PRC1-215ENST00000559811 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
PRC1-215ENST00000559811 CADPSQ9ULU8 1353 aa30.07■■■□□ 2.4
PRC1-215ENST00000559811 TOP2AP11388 1531 aaKnown RBP29.94■■■□□ 2.38
PRC1-215ENST00000559811 CFTRP13569 1480 aa29.8■■■□□ 2.36
PRC1-215ENST00000559811 MRC2Q9UBG0 1479 aa29.8■■■□□ 2.36
PRC1-215ENST00000559811 WDR62O43379 1518 aa29.76■■■□□ 2.35
PRC1-215ENST00000559811 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
PRC1-215ENST00000559811 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
PRC1-215ENST00000559811 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
PRC1-215ENST00000559811 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
PRC1-215ENST00000559811 URB2Q14146 1524 aaKnown RBP29.5■■■□□ 2.31
PRC1-215ENST00000559811 TOPBP1Q92547 1522 aa29.21■■■□□ 2.27
PRC1-215ENST00000559811 ABCC8Q09428 1581 aa29.17■■■□□ 2.26
PRC1-215ENST00000559811 IFT140Q96RY7 1462 aa29.13■■■□□ 2.25
PRC1-215ENST00000559811 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
PRC1-215ENST00000559811 ZNF608Q9ULD9 1512 aaPredicted RBP29.08■■■□□ 2.25
PRC1-215ENST00000559811 OSCARQ8IYS5 282 aa29.02■■■□□ 2.24
PRC1-215ENST00000559811 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
PRC1-215ENST00000559811 EIF4G3O43432 1585 aaKnown RBP28.95■■■□□ 2.22
PRC1-215ENST00000559811 POLA1P09884 1462 aaPredicted RBP28.92■■■□□ 2.22
PRC1-215ENST00000559811 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
PRC1-215ENST00000559811 AQRO60306 1485 aaKnown RBP eCLIP28.84■■■□□ 2.211e-6■■■■■ 68
PRC1-215ENST00000559811 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
PRC1-215ENST00000559811 CUX1P39880 1505 aa28.8■■■□□ 2.2
PRC1-215ENST00000559811 RAD54L2Q9Y4B4 1467 aa28.8■■■□□ 2.2
PRC1-215ENST00000559811 SOGA1O94964 1423 aa28.78■■■□□ 2.2
PRC1-215ENST00000559811 FGD5Q6ZNL6 1462 aa28.77■■■□□ 2.2
PRC1-215ENST00000559811 CHD1O14646 1710 aa28.75■■■□□ 2.19
PRC1-215ENST00000559811 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
PRC1-215ENST00000559811 TDRD9Q8NDG6 1382 aaKnown RBP28.68■■■□□ 2.18
PRC1-215ENST00000559811 RIMBP3CA6NJZ7 1639 aa28.68■■■□□ 2.18
PRC1-215ENST00000559811 RIMBP3BA6NNM3 1639 aa28.68■■■□□ 2.18
PRC1-215ENST00000559811 RIMBP3Q9UFD9 1639 aa28.68■■■□□ 2.18
PRC1-215ENST00000559811 ARHGEF11O15085 1522 aa28.58■■■□□ 2.17
PRC1-215ENST00000559811 SNAPC4Q5SXM2 1469 aa28.54■■■□□ 2.16
PRC1-215ENST00000559811 FBLN2P98095 1184 aa28.54■■■□□ 2.16
PRC1-215ENST00000559811 GRIN2BQ13224 1484 aa28.5■■■□□ 2.15
PRC1-215ENST00000559811 PBRM1Q86U86 1689 aa28.49■■■□□ 2.15
PRC1-215ENST00000559811 MAGI1Q96QZ7 1491 aaPredicted RBP28.49■■■□□ 2.15
PRC1-215ENST00000559811 ABCA10Q8WWZ4 1543 aa28.47■■■□□ 2.15
PRC1-215ENST00000559811 BIVM-ERCC5R4GMW8 1640 aa28.45■■■□□ 2.14
PRC1-215ENST00000559811 ABCA5Q8WWZ7 1642 aa28.44■■■□□ 2.14
PRC1-215ENST00000559811 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
PRC1-215ENST00000559811 TOP2BQ02880 1626 aa28.43■■■□□ 2.14
PRC1-215ENST00000559811 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
PRC1-215ENST00000559811 SYNJ2O15056 1496 aa28.39■■■□□ 2.13
PRC1-215ENST00000559811 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
PRC1-215ENST00000559811 CLASP1Q7Z460 1538 aa28.38■■■□□ 2.13
PRC1-215ENST00000559811 WRNQ14191 1432 aaPredicted RBP eCLIP28.37■■■□□ 2.13
PRC1-215ENST00000559811 CYB5RLQ6IPT4 315 aa28.32■■■□□ 2.12
PRC1-215ENST00000559811 ARAP1Q96P48 1450 aa28.31■■■□□ 2.12
PRC1-215ENST00000559811 ADAMTS12P58397 1594 aa28.17■■■□□ 2.1
PRC1-215ENST00000559811 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
PRC1-215ENST00000559811 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
PRC1-215ENST00000559811 FHAD1B1AJZ9 1412 aa28.08■■■□□ 2.09
PRC1-215ENST00000559811 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
PRC1-215ENST00000559811 NUP160Q12769 1436 aa28.05■■■□□ 2.08
PRC1-215ENST00000559811 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
PRC1-215ENST00000559811 ERCC6L2Q5T890 1561 aa27.95■■■□□ 2.07
PRC1-215ENST00000559811 TRHP20396 242 aaPredicted RBP27.89■■■□□ 2.06
PRC1-215ENST00000559811 IGF1RP08069 1367 aa27.81■■■□□ 2.04
PRC1-215ENST00000559811 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
PRC1-215ENST00000559811 RUSC2Q8N2Y8 1516 aa27.78■■■□□ 2.04
PRC1-215ENST00000559811 CUL7Q14999 1698 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms