RNA–Protein interactions for RNA: ENST00000559588.5

IPO4-209, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,537 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-209ENST00000559588 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
IPO4-209ENST00000559588 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
IPO4-209ENST00000559588 HRCP23327 699 aa18.07■□□□□ 0.48
IPO4-209ENST00000559588 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
IPO4-209ENST00000559588 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
IPO4-209ENST00000559588 MYT1Q01538 1121 aa18.03■□□□□ 0.48
IPO4-209ENST00000559588 SHROOM4Q9ULL8 1493 aa17.91■□□□□ 0.46
IPO4-209ENST00000559588 PCGF6Q9BYE7 350 aa17.85■□□□□ 0.45
IPO4-209ENST00000559588 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
IPO4-209ENST00000559588 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
IPO4-209ENST00000559588 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
IPO4-209ENST00000559588 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
IPO4-209ENST00000559588 ABCC9O60706 1549 aa17.05■□□□□ 0.32
IPO4-209ENST00000559588 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
IPO4-209ENST00000559588 BCL11AQ9H165 835 aa16.96■□□□□ 0.31
IPO4-209ENST00000559588 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
IPO4-209ENST00000559588 NEUROD1Q13562 356 aa16.95■□□□□ 0.3
IPO4-209ENST00000559588 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
IPO4-209ENST00000559588 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
IPO4-209ENST00000559588 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
IPO4-209ENST00000559588 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
IPO4-209ENST00000559588 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
IPO4-209ENST00000559588 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
IPO4-209ENST00000559588 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
IPO4-209ENST00000559588 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
IPO4-209ENST00000559588 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
IPO4-209ENST00000559588 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
IPO4-209ENST00000559588 TRIM26Q12899 539 aaPredicted RBP16.7■□□□□ 0.26
IPO4-209ENST00000559588 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
IPO4-209ENST00000559588 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
IPO4-209ENST00000559588 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■■□□ 18.5
IPO4-209ENST00000559588 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
IPO4-209ENST00000559588 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
IPO4-209ENST00000559588 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
IPO4-209ENST00000559588 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
IPO4-209ENST00000559588 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
IPO4-209ENST00000559588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
IPO4-209ENST00000559588 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
IPO4-209ENST00000559588 NACADO15069 1562 aa16.15■□□□□ 0.18
IPO4-209ENST00000559588 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
IPO4-209ENST00000559588 BCANQ96GW7 911 aa16.06■□□□□ 0.16
IPO4-209ENST00000559588 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.15
IPO4-209ENST00000559588 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.15
IPO4-209ENST00000559588 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
IPO4-209ENST00000559588 MIER1Q8N108 512 aa15.91■□□□□ 0.14
IPO4-209ENST00000559588 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
IPO4-209ENST00000559588 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
IPO4-209ENST00000559588 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
IPO4-209ENST00000559588 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
IPO4-209ENST00000559588 APLP2Q06481 763 aa15.82■□□□□ 0.12
IPO4-209ENST00000559588 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
IPO4-209ENST00000559588 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
IPO4-209ENST00000559588 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
IPO4-209ENST00000559588 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
IPO4-209ENST00000559588 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
IPO4-209ENST00000559588 ITGAEP38570 1179 aa15.65■□□□□ 0.1
IPO4-209ENST00000559588 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
IPO4-209ENST00000559588 NEFLP07196 543 aa15.65■□□□□ 0.1
IPO4-209ENST00000559588 RBM19Q9Y4C8 960 aaKnown RBP15.64■□□□□ 0.09
IPO4-209ENST00000559588 DEKP35659 375 aaKnown RBP15.63■□□□□ 0.09
IPO4-209ENST00000559588 FKBP8Q14318 412 aa15.63■□□□□ 0.09
IPO4-209ENST00000559588 UBTFP17480 764 aaKnown RBP15.6■□□□□ 0.09
IPO4-209ENST00000559588 NBR1Q14596 966 aa15.59■□□□□ 0.09
IPO4-209ENST00000559588 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
IPO4-209ENST00000559588 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
IPO4-209ENST00000559588 WIZO95785 1651 aa15.56■□□□□ 0.08
IPO4-209ENST00000559588 CLSPNQ9HAW4 1339 aa15.5■□□□□ 0.07
IPO4-209ENST00000559588 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
IPO4-209ENST00000559588 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
IPO4-209ENST00000559588 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
IPO4-209ENST00000559588 SMARCA4P51532 1647 aa15.41■□□□□ 0.06
IPO4-209ENST00000559588 MSH5O43196 834 aa15.39■□□□□ 0.05
IPO4-209ENST00000559588 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
IPO4-209ENST00000559588 CCDC88BA6NC98 1476 aa15.35■□□□□ 0.05
IPO4-209ENST00000559588 MYT1LQ9UL68 1186 aa15.35■□□□□ 0.05
IPO4-209ENST00000559588 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
IPO4-209ENST00000559588 UBE2Q2Q8WVN8 375 aa15.33■□□□□ 0.05
IPO4-209ENST00000559588 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
IPO4-209ENST00000559588 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
IPO4-209ENST00000559588 PKNOX2Q96KN3 472 aa15.28■□□□□ 0.04
IPO4-209ENST00000559588 CEP162Q5TB80 1403 aa15.27■□□□□ 0.03
IPO4-209ENST00000559588 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
IPO4-209ENST00000559588 SOGA1O94964 1423 aa15.26■□□□□ 0.03
IPO4-209ENST00000559588 IRX6P78412 446 aaPredicted RBP15.26■□□□□ 0.03
IPO4-209ENST00000559588 TOP2AP11388 1531 aaKnown RBP15.26■□□□□ 0.03
IPO4-209ENST00000559588 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
IPO4-209ENST00000559588 TRIM52Q96A61 297 aa15.22■□□□□ 0.03
IPO4-209ENST00000559588 ERICH6BQ5W0A0 696 aa15.2■□□□□ 0.02
IPO4-209ENST00000559588 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
IPO4-209ENST00000559588 KCNH8Q96L42 1107 aa15.19■□□□□ 0.02
IPO4-209ENST00000559588 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
IPO4-209ENST00000559588 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
IPO4-209ENST00000559588 SLC24A1O60721 1099 aa15.18■□□□□ 0.02
IPO4-209ENST00000559588 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
IPO4-209ENST00000559588 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
IPO4-209ENST00000559588 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
IPO4-209ENST00000559588 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
IPO4-209ENST00000559588 NOP58Q9Y2X3 529 aaKnown RBP15.08■□□□□ 0.01
IPO4-209ENST00000559588 GLIPR1L2Q4G1C9 344 aa15.06■□□□□ 0
IPO4-209ENST00000559588 FANCIQ9NVI1 1328 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms