RNA–Protein interactions for RNA: ENST00000558950.1

SLC12A6-208, Transcript of solute carrier family 12 member 6, humanhuman

TSL 3

Gene SLC12A6, Length 750 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A6-208ENST00000558950 NISCHQ9Y2I1 1504 aa18.89■□□□□ 0.61
SLC12A6-208ENST00000558950 ABCC9O60706 1549 aa18.35■□□□□ 0.53
SLC12A6-208ENST00000558950 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
SLC12A6-208ENST00000558950 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
SLC12A6-208ENST00000558950 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
SLC12A6-208ENST00000558950 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
SLC12A6-208ENST00000558950 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.36
SLC12A6-208ENST00000558950 PABPN1Q86U42 306 aaKnown RBP eCLIP16.99■□□□□ 0.31
SLC12A6-208ENST00000558950 RB1CC1Q8TDY2 1594 aa16.97■□□□□ 0.31
SLC12A6-208ENST00000558950 CECR2Q9BXF3 1484 aa16.64■□□□□ 0.25
SLC12A6-208ENST00000558950 NACADO15069 1562 aa16.64■□□□□ 0.25
SLC12A6-208ENST00000558950 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
SLC12A6-208ENST00000558950 UNC13AQ9UPW8 1703 aa16.49■□□□□ 0.23
SLC12A6-208ENST00000558950 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
SLC12A6-208ENST00000558950 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
SLC12A6-208ENST00000558950 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
SLC12A6-208ENST00000558950 CUX2O14529 1486 aa16.22■□□□□ 0.19
SLC12A6-208ENST00000558950 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
SLC12A6-208ENST00000558950 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
SLC12A6-208ENST00000558950 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
SLC12A6-208ENST00000558950 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
SLC12A6-208ENST00000558950 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
SLC12A6-208ENST00000558950 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
SLC12A6-208ENST00000558950 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
SLC12A6-208ENST00000558950 NESP48681 1621 aa15.49■□□□□ 0.07
SLC12A6-208ENST00000558950 THOC2Q8NI27 1593 aaKnown RBP15.47■□□□□ 0.07
SLC12A6-208ENST00000558950 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
SLC12A6-208ENST00000558950 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
SLC12A6-208ENST00000558950 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
SLC12A6-208ENST00000558950 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
SLC12A6-208ENST00000558950 ATAD2BQ9ULI0 1458 aa15.24■□□□□ 0.03
SLC12A6-208ENST00000558950 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
SLC12A6-208ENST00000558950 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
SLC12A6-208ENST00000558950 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
SLC12A6-208ENST00000558950 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
SLC12A6-208ENST00000558950 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
SLC12A6-208ENST00000558950 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
SLC12A6-208ENST00000558950 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
SLC12A6-208ENST00000558950 HMGXB3Q12766 1538 aa15.16■□□□□ 0.02
SLC12A6-208ENST00000558950 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
SLC12A6-208ENST00000558950 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
SLC12A6-208ENST00000558950 CYB5RLQ6IPT4 315 aa15.07■□□□□ 0
SLC12A6-208ENST00000558950 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
SLC12A6-208ENST00000558950 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
SLC12A6-208ENST00000558950 ARHGEF11O15085 1522 aa15.07■□□□□ 0
SLC12A6-208ENST00000558950 WDR62O43379 1518 aa15.07■□□□□ 0
SLC12A6-208ENST00000558950 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
SLC12A6-208ENST00000558950 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
SLC12A6-208ENST00000558950 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
SLC12A6-208ENST00000558950 SMARCA4P51532 1647 aa14.89□□□□□ -0.03
SLC12A6-208ENST00000558950 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
SLC12A6-208ENST00000558950 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
SLC12A6-208ENST00000558950 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
SLC12A6-208ENST00000558950 FANCD2Q9BXW9 1451 aa14.71□□□□□ -0.05
SLC12A6-208ENST00000558950 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
SLC12A6-208ENST00000558950 URB2Q14146 1524 aaKnown RBP14.66□□□□□ -0.06
SLC12A6-208ENST00000558950 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
SLC12A6-208ENST00000558950 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
SLC12A6-208ENST00000558950 MROH2BQ7Z745 1585 aa14.55□□□□□ -0.08
SLC12A6-208ENST00000558950 CFTRP13569 1480 aa14.53□□□□□ -0.08
SLC12A6-208ENST00000558950 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.09
SLC12A6-208ENST00000558950 FBLN2P98095 1184 aa14.49□□□□□ -0.09
SLC12A6-208ENST00000558950 CHD1O14646 1710 aa14.47□□□□□ -0.09
SLC12A6-208ENST00000558950 EIF4G3O43432 1585 aaKnown RBP14.44□□□□□ -0.1
SLC12A6-208ENST00000558950 AQRO60306 1485 aaKnown RBP eCLIP14.41□□□□□ -0.1
SLC12A6-208ENST00000558950 CLASP1Q7Z460 1538 aa14.39□□□□□ -0.11
SLC12A6-208ENST00000558950 GAPVD1Q14C86 1478 aa14.33□□□□□ -0.12
SLC12A6-208ENST00000558950 TOPBP1Q92547 1522 aa14.32□□□□□ -0.12
SLC12A6-208ENST00000558950 FBXO41Q8TF61 875 aa14.31□□□□□ -0.12
SLC12A6-208ENST00000558950 WIZO95785 1651 aa14.26□□□□□ -0.13
SLC12A6-208ENST00000558950 ADRA2BP18089 450 aa14.25□□□□□ -0.13
SLC12A6-208ENST00000558950 TARBP1Q13395 1621 aaKnown RBP14.25□□□□□ -0.13
SLC12A6-208ENST00000558950 CHMP7Q8WUX9 453 aaPredicted RBP14.24□□□□□ -0.13
SLC12A6-208ENST00000558950 SYNJ1O43426 1573 aa14.24□□□□□ -0.13
SLC12A6-208ENST00000558950 ERCC6L2Q5T890 1561 aa14.22□□□□□ -0.13
SLC12A6-208ENST00000558950 ABCC8Q09428 1581 aa14.21□□□□□ -0.14
SLC12A6-208ENST00000558950 SNAPC4Q5SXM2 1469 aa14.19□□□□□ -0.14
SLC12A6-208ENST00000558950 LMTK3Q96Q04 1460 aa14.19□□□□□ -0.14
SLC12A6-208ENST00000558950 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
SLC12A6-208ENST00000558950 SOCS7O14512 581 aa14.17□□□□□ -0.14
SLC12A6-208ENST00000558950 KIF13AQ9H1H9 1805 aa14.17□□□□□ -0.14
SLC12A6-208ENST00000558950 HECW2Q9P2P5 1572 aa14.17□□□□□ -0.14
SLC12A6-208ENST00000558950 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
SLC12A6-208ENST00000558950 FAM69CQ0P6D2 419 aa14.12□□□□□ -0.15
SLC12A6-208ENST00000558950 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
SLC12A6-208ENST00000558950 MAGI1Q96QZ7 1491 aaPredicted RBP14.11□□□□□ -0.15
SLC12A6-208ENST00000558950 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
SLC12A6-208ENST00000558950 ILDR2Q71H61 639 aa14.1□□□□□ -0.15
SLC12A6-208ENST00000558950 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
SLC12A6-208ENST00000558950 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
SLC12A6-208ENST00000558950 PRDM2Q13029 1718 aa14.08□□□□□ -0.16
SLC12A6-208ENST00000558950 KCNA4P22459 653 aa14.08□□□□□ -0.16
SLC12A6-208ENST00000558950 ABCC10Q5T3U5 1492 aa14.07□□□□□ -0.16
SLC12A6-208ENST00000558950 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
SLC12A6-208ENST00000558950 KDM6BO15054 1643 aa14.06□□□□□ -0.16
SLC12A6-208ENST00000558950 SOGA1O94964 1423 aa14.06□□□□□ -0.16
SLC12A6-208ENST00000558950 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
SLC12A6-208ENST00000558950 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
SLC12A6-208ENST00000558950 GRIN2BQ13224 1484 aa14.02□□□□□ -0.16
SLC12A6-208ENST00000558950 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms