RNA–Protein interactions for RNA: ENST00000558875.1

AC087516.2-203, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-203ENST00000558875 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
AC087516.2-203ENST00000558875 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
AC087516.2-203ENST00000558875 ABCC9O60706 1549 aa19.96■□□□□ 0.79
AC087516.2-203ENST00000558875 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
AC087516.2-203ENST00000558875 DCAF1Q9Y4B6 1507 aa19.7■□□□□ 0.74
AC087516.2-203ENST00000558875 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
AC087516.2-203ENST00000558875 NACADO15069 1562 aa19.56■□□□□ 0.72
AC087516.2-203ENST00000558875 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
AC087516.2-203ENST00000558875 RB1CC1Q8TDY2 1594 aa19.46■□□□□ 0.71
AC087516.2-203ENST00000558875 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
AC087516.2-203ENST00000558875 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
AC087516.2-203ENST00000558875 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
AC087516.2-203ENST00000558875 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
AC087516.2-203ENST00000558875 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
AC087516.2-203ENST00000558875 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
AC087516.2-203ENST00000558875 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
AC087516.2-203ENST00000558875 CECR2Q9BXF3 1484 aa18.36■□□□□ 0.53
AC087516.2-203ENST00000558875 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
AC087516.2-203ENST00000558875 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
AC087516.2-203ENST00000558875 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
AC087516.2-203ENST00000558875 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
AC087516.2-203ENST00000558875 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
AC087516.2-203ENST00000558875 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
AC087516.2-203ENST00000558875 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
AC087516.2-203ENST00000558875 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
AC087516.2-203ENST00000558875 WIZO95785 1651 aa18.03■□□□□ 0.48
AC087516.2-203ENST00000558875 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
AC087516.2-203ENST00000558875 HMGXB3Q12766 1538 aa18.02■□□□□ 0.47
AC087516.2-203ENST00000558875 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
AC087516.2-203ENST00000558875 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
AC087516.2-203ENST00000558875 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
AC087516.2-203ENST00000558875 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
AC087516.2-203ENST00000558875 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
AC087516.2-203ENST00000558875 CFTRP13569 1480 aa17.52■□□□□ 0.4
AC087516.2-203ENST00000558875 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.39
AC087516.2-203ENST00000558875 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
AC087516.2-203ENST00000558875 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
AC087516.2-203ENST00000558875 NESP48681 1621 aa17.39■□□□□ 0.37
AC087516.2-203ENST00000558875 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
AC087516.2-203ENST00000558875 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
AC087516.2-203ENST00000558875 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
AC087516.2-203ENST00000558875 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
AC087516.2-203ENST00000558875 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
AC087516.2-203ENST00000558875 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
AC087516.2-203ENST00000558875 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
AC087516.2-203ENST00000558875 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
AC087516.2-203ENST00000558875 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
AC087516.2-203ENST00000558875 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
AC087516.2-203ENST00000558875 CUX1P39880 1505 aa17.11■□□□□ 0.33
AC087516.2-203ENST00000558875 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
AC087516.2-203ENST00000558875 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
AC087516.2-203ENST00000558875 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
AC087516.2-203ENST00000558875 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
AC087516.2-203ENST00000558875 WDR62O43379 1518 aa17.08■□□□□ 0.32
AC087516.2-203ENST00000558875 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
AC087516.2-203ENST00000558875 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
AC087516.2-203ENST00000558875 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
AC087516.2-203ENST00000558875 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
AC087516.2-203ENST00000558875 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
AC087516.2-203ENST00000558875 CUX2O14529 1486 aa16.92■□□□□ 0.3
AC087516.2-203ENST00000558875 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
AC087516.2-203ENST00000558875 SOGA1O94964 1423 aa16.88■□□□□ 0.29
AC087516.2-203ENST00000558875 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
AC087516.2-203ENST00000558875 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
AC087516.2-203ENST00000558875 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
AC087516.2-203ENST00000558875 WDR97A6NE52 1622 aa16.82■□□□□ 0.28
AC087516.2-203ENST00000558875 EEA1Q15075 1411 aa16.82■□□□□ 0.28
AC087516.2-203ENST00000558875 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
AC087516.2-203ENST00000558875 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
AC087516.2-203ENST00000558875 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
AC087516.2-203ENST00000558875 GAPVD1Q14C86 1478 aa16.72■□□□□ 0.27
AC087516.2-203ENST00000558875 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
AC087516.2-203ENST00000558875 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
AC087516.2-203ENST00000558875 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
AC087516.2-203ENST00000558875 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
AC087516.2-203ENST00000558875 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
AC087516.2-203ENST00000558875 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC087516.2-203ENST00000558875 IGF1RP08069 1367 aa16.64■□□□□ 0.25
AC087516.2-203ENST00000558875 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
AC087516.2-203ENST00000558875 CUL7Q14999 1698 aa16.62■□□□□ 0.25
AC087516.2-203ENST00000558875 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
AC087516.2-203ENST00000558875 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
AC087516.2-203ENST00000558875 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
AC087516.2-203ENST00000558875 PRXQ9BXM0 1461 aa16.59■□□□□ 0.25
AC087516.2-203ENST00000558875 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
AC087516.2-203ENST00000558875 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
AC087516.2-203ENST00000558875 KIF21BO75037 1637 aa16.56■□□□□ 0.24
AC087516.2-203ENST00000558875 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
AC087516.2-203ENST00000558875 CARMIL1Q5VZK9 1371 aa16.55■□□□□ 0.24
AC087516.2-203ENST00000558875 SYNJ2O15056 1496 aa16.52■□□□□ 0.23
AC087516.2-203ENST00000558875 RAPGEF2Q9Y4G8 1499 aa16.52■□□□□ 0.23
AC087516.2-203ENST00000558875 GOLGA3Q08378 1498 aa16.51■□□□□ 0.23
AC087516.2-203ENST00000558875 GRIN2AQ12879 1464 aa16.46■□□□□ 0.23
AC087516.2-203ENST00000558875 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
AC087516.2-203ENST00000558875 NUP160Q12769 1436 aa16.38■□□□□ 0.21
AC087516.2-203ENST00000558875 FBLN2P98095 1184 aa16.36■□□□□ 0.21
AC087516.2-203ENST00000558875 TNIKQ9UKE5 1360 aa16.36■□□□□ 0.21
AC087516.2-203ENST00000558875 CHD1O14646 1710 aa16.36■□□□□ 0.21
AC087516.2-203ENST00000558875 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
AC087516.2-203ENST00000558875 KIAA0586Q9BVV6 1533 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms