RNA–Protein interactions for RNA: ENST00000558616.1

AC023908.2-201, humanhuman

TSL 3 BASIC

Gene AC023908.2, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023908.2-201ENST00000558616 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
AC023908.2-201ENST00000558616 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
AC023908.2-201ENST00000558616 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
AC023908.2-201ENST00000558616 ABCC9O60706 1549 aa14.35□□□□□ -0.11
AC023908.2-201ENST00000558616 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
AC023908.2-201ENST00000558616 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
AC023908.2-201ENST00000558616 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
AC023908.2-201ENST00000558616 NACADO15069 1562 aa13.93□□□□□ -0.18
AC023908.2-201ENST00000558616 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
AC023908.2-201ENST00000558616 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
AC023908.2-201ENST00000558616 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
AC023908.2-201ENST00000558616 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
AC023908.2-201ENST00000558616 UNC13AQ9UPW8 1703 aa13.57□□□□□ -0.24
AC023908.2-201ENST00000558616 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
AC023908.2-201ENST00000558616 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
AC023908.2-201ENST00000558616 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
AC023908.2-201ENST00000558616 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
AC023908.2-201ENST00000558616 SUPT5HO00267 1087 aaKnown RBP13.16□□□□□ -0.3
AC023908.2-201ENST00000558616 MROH2BQ7Z745 1585 aa13.13□□□□□ -0.31
AC023908.2-201ENST00000558616 BAZ1AQ9NRL2 1556 aaPredicted RBP13.13□□□□□ -0.31
AC023908.2-201ENST00000558616 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
AC023908.2-201ENST00000558616 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
AC023908.2-201ENST00000558616 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
AC023908.2-201ENST00000558616 WIZO95785 1651 aa13.01□□□□□ -0.33
AC023908.2-201ENST00000558616 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
AC023908.2-201ENST00000558616 CC2D2AQ9P2K1 1620 aa12.94□□□□□ -0.34
AC023908.2-201ENST00000558616 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
AC023908.2-201ENST00000558616 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
AC023908.2-201ENST00000558616 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
AC023908.2-201ENST00000558616 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
AC023908.2-201ENST00000558616 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
AC023908.2-201ENST00000558616 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
AC023908.2-201ENST00000558616 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
AC023908.2-201ENST00000558616 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
AC023908.2-201ENST00000558616 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
AC023908.2-201ENST00000558616 CADPSQ9ULU8 1353 aa12.53□□□□□ -0.4
AC023908.2-201ENST00000558616 NESP48681 1621 aa12.51□□□□□ -0.41
AC023908.2-201ENST00000558616 CFTRP13569 1480 aa12.51□□□□□ -0.41
AC023908.2-201ENST00000558616 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
AC023908.2-201ENST00000558616 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
AC023908.2-201ENST00000558616 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
AC023908.2-201ENST00000558616 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.42
AC023908.2-201ENST00000558616 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
AC023908.2-201ENST00000558616 SENP3Q9H4L4 574 aaPredicted RBP12.38□□□□□ -0.43
AC023908.2-201ENST00000558616 TRIM41Q8WV44 630 aa12.36□□□□□ -0.43
AC023908.2-201ENST00000558616 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
AC023908.2-201ENST00000558616 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
AC023908.2-201ENST00000558616 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
AC023908.2-201ENST00000558616 ERCC6Q03468 1493 aa12.33□□□□□ -0.44
AC023908.2-201ENST00000558616 SYNJ1O43426 1573 aa12.3□□□□□ -0.44
AC023908.2-201ENST00000558616 CUX1P39880 1505 aa12.28□□□□□ -0.44
AC023908.2-201ENST00000558616 URB2Q14146 1524 aaKnown RBP12.26□□□□□ -0.45
AC023908.2-201ENST00000558616 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
AC023908.2-201ENST00000558616 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
AC023908.2-201ENST00000558616 DNMBPQ6XZF7 1577 aa12.24□□□□□ -0.45
AC023908.2-201ENST00000558616 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
AC023908.2-201ENST00000558616 BIVM-ERCC5R4GMW8 1640 aa12.24□□□□□ -0.45
AC023908.2-201ENST00000558616 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
AC023908.2-201ENST00000558616 THOC2Q8NI27 1593 aaKnown RBP12.18□□□□□ -0.46
AC023908.2-201ENST00000558616 FAM9AQ8IZU1 332 aaPredicted RBP12.18□□□□□ -0.46
AC023908.2-201ENST00000558616 WDR62O43379 1518 aa12.16□□□□□ -0.46
AC023908.2-201ENST00000558616 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
AC023908.2-201ENST00000558616 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
AC023908.2-201ENST00000558616 SOGA1O94964 1423 aa12.13□□□□□ -0.47
AC023908.2-201ENST00000558616 RUSC2Q8N2Y8 1516 aa12.11□□□□□ -0.47
AC023908.2-201ENST00000558616 CUX2O14529 1486 aa12.09□□□□□ -0.47
AC023908.2-201ENST00000558616 KIF27Q86VH2 1401 aa12.06□□□□□ -0.48
AC023908.2-201ENST00000558616 PHF23Q9BUL5 403 aaPredicted RBP12.06□□□□□ -0.48
AC023908.2-201ENST00000558616 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
AC023908.2-201ENST00000558616 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
AC023908.2-201ENST00000558616 TARBP1Q13395 1621 aaKnown RBP12.05□□□□□ -0.48
AC023908.2-201ENST00000558616 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
AC023908.2-201ENST00000558616 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
AC023908.2-201ENST00000558616 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
AC023908.2-201ENST00000558616 EEA1Q15075 1411 aa12.03□□□□□ -0.48
AC023908.2-201ENST00000558616 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
AC023908.2-201ENST00000558616 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
AC023908.2-201ENST00000558616 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.49
AC023908.2-201ENST00000558616 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
AC023908.2-201ENST00000558616 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
AC023908.2-201ENST00000558616 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
AC023908.2-201ENST00000558616 IGF1RP08069 1367 aa11.96□□□□□ -0.49
AC023908.2-201ENST00000558616 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.5
AC023908.2-201ENST00000558616 GRIN2BQ13224 1484 aa11.93□□□□□ -0.5
AC023908.2-201ENST00000558616 PBRM1Q86U86 1689 aa11.93□□□□□ -0.5
AC023908.2-201ENST00000558616 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
AC023908.2-201ENST00000558616 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
AC023908.2-201ENST00000558616 KIF21BO75037 1637 aa11.89□□□□□ -0.51
AC023908.2-201ENST00000558616 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
AC023908.2-201ENST00000558616 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
AC023908.2-201ENST00000558616 UBTFP17480 764 aaKnown RBP11.89□□□□□ -0.51
AC023908.2-201ENST00000558616 GOLGA3Q08378 1498 aa11.89□□□□□ -0.51
AC023908.2-201ENST00000558616 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
AC023908.2-201ENST00000558616 CUL7Q14999 1698 aa11.88□□□□□ -0.51
AC023908.2-201ENST00000558616 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
AC023908.2-201ENST00000558616 FBLN2P98095 1184 aa11.85□□□□□ -0.51
AC023908.2-201ENST00000558616 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
AC023908.2-201ENST00000558616 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
AC023908.2-201ENST00000558616 CHMP7Q8WUX9 453 aaPredicted RBP11.82□□□□□ -0.52
AC023908.2-201ENST00000558616 RANGAP1P46060 587 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms