RNA–Protein interactions for RNA: ENST00000558604.1

ACAN-204, Transcript of aggrecan, humanhuman

TSL 2

Gene ACAN, Length 749 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-204ENST00000558604 NISCHQ9Y2I1 1504 aa36.63■■■■□ 3.45
ACAN-204ENST00000558604 CCDC180Q9P1Z9 1646 aa32.83■■■□□ 2.85
ACAN-204ENST00000558604 ABCC9O60706 1549 aa32.47■■■□□ 2.79
ACAN-204ENST00000558604 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
ACAN-204ENST00000558604 NACADO15069 1562 aa30.91■■■□□ 2.54
ACAN-204ENST00000558604 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
ACAN-204ENST00000558604 MYO15BQ96JP2 1530 aa30.53■■■□□ 2.48
ACAN-204ENST00000558604 ZCCHC6Q5VYS8 1495 aaKnown RBP30.45■■■□□ 2.47
ACAN-204ENST00000558604 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.45
ACAN-204ENST00000558604 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
ACAN-204ENST00000558604 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
ACAN-204ENST00000558604 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
ACAN-204ENST00000558604 DNAJC5BQ9UF47 199 aa30■■■□□ 2.39
ACAN-204ENST00000558604 SCRIBQ14160 1630 aa29.95■■■□□ 2.38
ACAN-204ENST00000558604 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
ACAN-204ENST00000558604 EIF4G1Q04637 1599 aaKnown RBP29.37■■■□□ 2.29
ACAN-204ENST00000558604 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
ACAN-204ENST00000558604 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
ACAN-204ENST00000558604 SMARCA4P51532 1647 aa28.56■■■□□ 2.16
ACAN-204ENST00000558604 BAZ1AQ9NRL2 1556 aaPredicted RBP28.47■■■□□ 2.15
ACAN-204ENST00000558604 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
ACAN-204ENST00000558604 SMARCA2P51531 1590 aa28.45■■■□□ 2.15
ACAN-204ENST00000558604 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
ACAN-204ENST00000558604 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
ACAN-204ENST00000558604 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
ACAN-204ENST00000558604 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
ACAN-204ENST00000558604 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
ACAN-204ENST00000558604 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
ACAN-204ENST00000558604 NESP48681 1621 aa27.96■■■□□ 2.07
ACAN-204ENST00000558604 WIZO95785 1651 aa27.94■■■□□ 2.06
ACAN-204ENST00000558604 CUX2O14529 1486 aa27.86■■■□□ 2.05
ACAN-204ENST00000558604 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
ACAN-204ENST00000558604 RSF1Q96T23 1441 aaPredicted RBP27.73■■■□□ 2.03
ACAN-204ENST00000558604 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
ACAN-204ENST00000558604 THOC2Q8NI27 1593 aaKnown RBP27.66■■■□□ 2.02
ACAN-204ENST00000558604 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
ACAN-204ENST00000558604 TOP2AP11388 1531 aaKnown RBP27.63■■■□□ 2.01
ACAN-204ENST00000558604 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
ACAN-204ENST00000558604 MRC2Q9UBG0 1479 aa27.43■■□□□ 1.98
ACAN-204ENST00000558604 CEP164Q9UPV0 1460 aa27.4■■□□□ 1.98
ACAN-204ENST00000558604 CFTRP13569 1480 aa27.38■■□□□ 1.97
ACAN-204ENST00000558604 DNAJC5Q9H3Z4 198 aa27.37■■□□□ 1.97
ACAN-204ENST00000558604 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
ACAN-204ENST00000558604 WDR62O43379 1518 aa27.34■■□□□ 1.97
ACAN-204ENST00000558604 PRDM2Q13029 1718 aa27.29■■□□□ 1.96
ACAN-204ENST00000558604 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
ACAN-204ENST00000558604 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
ACAN-204ENST00000558604 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
ACAN-204ENST00000558604 TOPBP1Q92547 1522 aa26.87■■□□□ 1.89
ACAN-204ENST00000558604 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
ACAN-204ENST00000558604 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
ACAN-204ENST00000558604 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
ACAN-204ENST00000558604 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
ACAN-204ENST00000558604 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.87
ACAN-204ENST00000558604 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
ACAN-204ENST00000558604 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
ACAN-204ENST00000558604 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
ACAN-204ENST00000558604 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
ACAN-204ENST00000558604 CUX1P39880 1505 aa26.52■■□□□ 1.84
ACAN-204ENST00000558604 FGD5Q6ZNL6 1462 aa26.52■■□□□ 1.84
ACAN-204ENST00000558604 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.83
ACAN-204ENST00000558604 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
ACAN-204ENST00000558604 SOGA1O94964 1423 aa26.48■■□□□ 1.83
ACAN-204ENST00000558604 CHD1O14646 1710 aa26.42■■□□□ 1.82
ACAN-204ENST00000558604 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
ACAN-204ENST00000558604 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
ACAN-204ENST00000558604 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
ACAN-204ENST00000558604 FBLN2P98095 1184 aa26.31■■□□□ 1.8
ACAN-204ENST00000558604 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
ACAN-204ENST00000558604 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
ACAN-204ENST00000558604 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
ACAN-204ENST00000558604 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
ACAN-204ENST00000558604 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
ACAN-204ENST00000558604 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
ACAN-204ENST00000558604 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
ACAN-204ENST00000558604 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
ACAN-204ENST00000558604 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
ACAN-204ENST00000558604 TOP2BQ02880 1626 aa26.21■■□□□ 1.79
ACAN-204ENST00000558604 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
ACAN-204ENST00000558604 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.79
ACAN-204ENST00000558604 SYNJ1O43426 1573 aa26.2■■□□□ 1.78
ACAN-204ENST00000558604 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
ACAN-204ENST00000558604 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
ACAN-204ENST00000558604 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
ACAN-204ENST00000558604 SYNJ2O15056 1496 aa26.13■■□□□ 1.77
ACAN-204ENST00000558604 CLASP1Q7Z460 1538 aa26.05■■□□□ 1.76
ACAN-204ENST00000558604 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
ACAN-204ENST00000558604 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
ACAN-204ENST00000558604 CYB5RLQ6IPT4 315 aa25.95■■□□□ 1.74
ACAN-204ENST00000558604 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
ACAN-204ENST00000558604 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
ACAN-204ENST00000558604 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
ACAN-204ENST00000558604 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
ACAN-204ENST00000558604 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
ACAN-204ENST00000558604 NUP160Q12769 1436 aa25.78■■□□□ 1.72
ACAN-204ENST00000558604 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
ACAN-204ENST00000558604 SHROOM2Q13796 1616 aa25.66■■□□□ 1.7
ACAN-204ENST00000558604 CUL7Q14999 1698 aa25.66■■□□□ 1.7
ACAN-204ENST00000558604 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
ACAN-204ENST00000558604 TRHP20396 242 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms