RNA–Protein interactions for RNA: ENST00000558255.1

AC113146.1-201, humanhuman

TSL 3 BASIC

Gene AC113146.1, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC113146.1-201ENST00000558255 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
AC113146.1-201ENST00000558255 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
AC113146.1-201ENST00000558255 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
AC113146.1-201ENST00000558255 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
AC113146.1-201ENST00000558255 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
AC113146.1-201ENST00000558255 FOXD1Q16676 465 aa19.95■□□□□ 0.78
AC113146.1-201ENST00000558255 CCDC180Q9P1Z9 1646 aa19.72■□□□□ 0.75
AC113146.1-201ENST00000558255 ABCC9O60706 1549 aa19.34■□□□□ 0.69
AC113146.1-201ENST00000558255 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.68
AC113146.1-201ENST00000558255 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
AC113146.1-201ENST00000558255 ADRA2BP18089 450 aa18.78■□□□□ 0.6
AC113146.1-201ENST00000558255 PIAS4Q8N2W9 510 aaPredicted RBP18.67■□□□□ 0.58
AC113146.1-201ENST00000558255 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
AC113146.1-201ENST00000558255 NACADO15069 1562 aa18.58■□□□□ 0.56
AC113146.1-201ENST00000558255 MSH5O43196 834 aa18.51■□□□□ 0.55
AC113146.1-201ENST00000558255 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
AC113146.1-201ENST00000558255 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
AC113146.1-201ENST00000558255 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
AC113146.1-201ENST00000558255 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
AC113146.1-201ENST00000558255 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
AC113146.1-201ENST00000558255 PABPN1Q86U42 306 aaKnown RBP eCLIP18.01■□□□□ 0.47
AC113146.1-201ENST00000558255 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
AC113146.1-201ENST00000558255 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
AC113146.1-201ENST00000558255 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
AC113146.1-201ENST00000558255 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
AC113146.1-201ENST00000558255 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
AC113146.1-201ENST00000558255 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
AC113146.1-201ENST00000558255 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
AC113146.1-201ENST00000558255 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
AC113146.1-201ENST00000558255 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
AC113146.1-201ENST00000558255 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
AC113146.1-201ENST00000558255 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
AC113146.1-201ENST00000558255 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
AC113146.1-201ENST00000558255 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
AC113146.1-201ENST00000558255 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
AC113146.1-201ENST00000558255 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
AC113146.1-201ENST00000558255 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
AC113146.1-201ENST00000558255 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.31
AC113146.1-201ENST00000558255 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
AC113146.1-201ENST00000558255 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
AC113146.1-201ENST00000558255 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
AC113146.1-201ENST00000558255 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
AC113146.1-201ENST00000558255 WIZO95785 1651 aa16.74■□□□□ 0.27
AC113146.1-201ENST00000558255 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
AC113146.1-201ENST00000558255 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
AC113146.1-201ENST00000558255 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
AC113146.1-201ENST00000558255 NESP48681 1621 aa16.67■□□□□ 0.26
AC113146.1-201ENST00000558255 CUX2O14529 1486 aa16.65■□□□□ 0.26
AC113146.1-201ENST00000558255 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
AC113146.1-201ENST00000558255 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
AC113146.1-201ENST00000558255 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
AC113146.1-201ENST00000558255 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
AC113146.1-201ENST00000558255 THOC2Q8NI27 1593 aaKnown RBP16.5■□□□□ 0.23
AC113146.1-201ENST00000558255 CFTRP13569 1480 aa16.48■□□□□ 0.23
AC113146.1-201ENST00000558255 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
AC113146.1-201ENST00000558255 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
AC113146.1-201ENST00000558255 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
AC113146.1-201ENST00000558255 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
AC113146.1-201ENST00000558255 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
AC113146.1-201ENST00000558255 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
AC113146.1-201ENST00000558255 WDR62O43379 1518 aa16.38■□□□□ 0.21
AC113146.1-201ENST00000558255 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
AC113146.1-201ENST00000558255 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
AC113146.1-201ENST00000558255 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
AC113146.1-201ENST00000558255 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
AC113146.1-201ENST00000558255 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
AC113146.1-201ENST00000558255 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
AC113146.1-201ENST00000558255 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
AC113146.1-201ENST00000558255 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
AC113146.1-201ENST00000558255 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
AC113146.1-201ENST00000558255 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
AC113146.1-201ENST00000558255 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
AC113146.1-201ENST00000558255 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
AC113146.1-201ENST00000558255 KCNA4P22459 653 aa16.04■□□□□ 0.16
AC113146.1-201ENST00000558255 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
AC113146.1-201ENST00000558255 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
AC113146.1-201ENST00000558255 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
AC113146.1-201ENST00000558255 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
AC113146.1-201ENST00000558255 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
AC113146.1-201ENST00000558255 CUX1P39880 1505 aa15.92■□□□□ 0.14
AC113146.1-201ENST00000558255 SOGA1O94964 1423 aa15.92■□□□□ 0.14
AC113146.1-201ENST00000558255 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
AC113146.1-201ENST00000558255 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
AC113146.1-201ENST00000558255 RAD54L2Q9Y4B4 1467 aa15.86■□□□□ 0.13
AC113146.1-201ENST00000558255 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
AC113146.1-201ENST00000558255 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.13
AC113146.1-201ENST00000558255 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
AC113146.1-201ENST00000558255 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
AC113146.1-201ENST00000558255 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
AC113146.1-201ENST00000558255 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
AC113146.1-201ENST00000558255 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
AC113146.1-201ENST00000558255 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
AC113146.1-201ENST00000558255 BIVM-ERCC5R4GMW8 1640 aa15.77■□□□□ 0.12
AC113146.1-201ENST00000558255 MAGI1Q96QZ7 1491 aaPredicted RBP15.77■□□□□ 0.11
AC113146.1-201ENST00000558255 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
AC113146.1-201ENST00000558255 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
AC113146.1-201ENST00000558255 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
AC113146.1-201ENST00000558255 ABCA5Q8WWZ7 1642 aa15.71■□□□□ 0.11
AC113146.1-201ENST00000558255 CHD1O14646 1710 aa15.7■□□□□ 0.1
AC113146.1-201ENST00000558255 FBLN2P98095 1184 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms