RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 NISCHQ9Y2I1 1504 aa40.32■■■■■ 4.04
AC027088.1-201ENST00000557966 CCDC180Q9P1Z9 1646 aa36.02■■■■□ 3.36
AC027088.1-201ENST00000557966 ABCC9O60706 1549 aa35.68■■■■□ 3.3
AC027088.1-201ENST00000557966 RB1CC1Q8TDY2 1594 aa34.09■■■■□ 3.05
AC027088.1-201ENST00000557966 NACADO15069 1562 aa33.94■■■■□ 3.02
AC027088.1-201ENST00000557966 DCAF8L2P0C7V8 631 aa33.76■■■□□ 2.99
AC027088.1-201ENST00000557966 MYO15BQ96JP2 1530 aa33.6■■■□□ 2.97
AC027088.1-201ENST00000557966 ZCCHC6Q5VYS8 1495 aaKnown RBP33.52■■■□□ 2.96
AC027088.1-201ENST00000557966 UNC13AQ9UPW8 1703 aa33.37■■■□□ 2.93
AC027088.1-201ENST00000557966 DCAF1Q9Y4B6 1507 aa33.32■■■□□ 2.92
AC027088.1-201ENST00000557966 PABPN1Q86U42 306 aaKnown RBP eCLIP33.25■■■□□ 2.91
AC027088.1-201ENST00000557966 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
AC027088.1-201ENST00000557966 BICRAQ9NZM4 1560 aa33.16■■■□□ 2.9
AC027088.1-201ENST00000557966 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
AC027088.1-201ENST00000557966 SHROOM4Q9ULL8 1493 aa32.68■■■□□ 2.82
AC027088.1-201ENST00000557966 EIF4G1Q04637 1599 aaKnown RBP32.29■■■□□ 2.76
AC027088.1-201ENST00000557966 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
AC027088.1-201ENST00000557966 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
AC027088.1-201ENST00000557966 SMARCA4P51532 1647 aa31.38■■■□□ 2.61
AC027088.1-201ENST00000557966 NCAPD3P42695 1498 aa31.34■■■□□ 2.61
AC027088.1-201ENST00000557966 ATAD2BQ9ULI0 1458 aa31.32■■■□□ 2.6
AC027088.1-201ENST00000557966 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.59
AC027088.1-201ENST00000557966 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
AC027088.1-201ENST00000557966 HMGXB3Q12766 1538 aa31.17■■■□□ 2.58
AC027088.1-201ENST00000557966 MROH2BQ7Z745 1585 aa31.09■■■□□ 2.57
AC027088.1-201ENST00000557966 PEG3Q9GZU2 1588 aa31.08■■■□□ 2.57
AC027088.1-201ENST00000557966 BAZ1BQ9UIG0 1483 aaKnown RBP31.01■■■□□ 2.56
AC027088.1-201ENST00000557966 NESP48681 1621 aa30.78■■■□□ 2.52
AC027088.1-201ENST00000557966 ERCC6Q03468 1493 aa30.74■■■□□ 2.51
AC027088.1-201ENST00000557966 WIZO95785 1651 aa30.73■■■□□ 2.51
AC027088.1-201ENST00000557966 LAMC3Q9Y6N6 1575 aa30.58■■■□□ 2.49
AC027088.1-201ENST00000557966 CUX2O14529 1486 aa30.58■■■□□ 2.49
AC027088.1-201ENST00000557966 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
AC027088.1-201ENST00000557966 THOC2Q8NI27 1593 aaKnown RBP30.42■■■□□ 2.46
AC027088.1-201ENST00000557966 KIF21AQ7Z4S6 1674 aa30.39■■■□□ 2.45
AC027088.1-201ENST00000557966 CADPSQ9ULU8 1353 aa30.39■■■□□ 2.45
AC027088.1-201ENST00000557966 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
AC027088.1-201ENST00000557966 PDS5BQ9NTI5 1447 aa30.35■■■□□ 2.45
AC027088.1-201ENST00000557966 CFTRP13569 1480 aa30.14■■■□□ 2.42
AC027088.1-201ENST00000557966 DNAJC5Q9H3Z4 198 aa30.13■■■□□ 2.41
AC027088.1-201ENST00000557966 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
AC027088.1-201ENST00000557966 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
AC027088.1-201ENST00000557966 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
AC027088.1-201ENST00000557966 WDR62O43379 1518 aa30.06■■■□□ 2.4
AC027088.1-201ENST00000557966 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
AC027088.1-201ENST00000557966 PRDM2Q13029 1718 aa29.88■■■□□ 2.37
AC027088.1-201ENST00000557966 URB2Q14146 1524 aaKnown RBP29.83■■■□□ 2.37
AC027088.1-201ENST00000557966 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
AC027088.1-201ENST00000557966 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
AC027088.1-201ENST00000557966 ABCC8Q09428 1581 aa29.44■■■□□ 2.3
AC027088.1-201ENST00000557966 IFT140Q96RY7 1462 aa29.44■■■□□ 2.3
AC027088.1-201ENST00000557966 ZNF608Q9ULD9 1512 aaPredicted RBP29.4■■■□□ 2.3
AC027088.1-201ENST00000557966 SUPT5HO00267 1087 aaKnown RBP29.39■■■□□ 2.3
AC027088.1-201ENST00000557966 POLA1P09884 1462 aaPredicted RBP29.28■■■□□ 2.28
AC027088.1-201ENST00000557966 TARBP1Q13395 1621 aaKnown RBP29.27■■■□□ 2.28
AC027088.1-201ENST00000557966 EIF4G3O43432 1585 aaKnown RBP29.27■■■□□ 2.28
AC027088.1-201ENST00000557966 CUX1P39880 1505 aa29.19■■■□□ 2.26
AC027088.1-201ENST00000557966 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
AC027088.1-201ENST00000557966 RAD54L2Q9Y4B4 1467 aa29.17■■■□□ 2.26
AC027088.1-201ENST00000557966 AQRO60306 1485 aaKnown RBP eCLIP29.15■■■□□ 2.26
AC027088.1-201ENST00000557966 FGD5Q6ZNL6 1462 aa29.15■■■□□ 2.26
AC027088.1-201ENST00000557966 SOGA1O94964 1423 aa29.1■■■□□ 2.25
AC027088.1-201ENST00000557966 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.24
AC027088.1-201ENST00000557966 WDR97A6NE52 1622 aa28.97■■■□□ 2.23
AC027088.1-201ENST00000557966 CHD1O14646 1710 aa28.97■■■□□ 2.23
AC027088.1-201ENST00000557966 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
AC027088.1-201ENST00000557966 SNAPC4Q5SXM2 1469 aa28.89■■■□□ 2.22
AC027088.1-201ENST00000557966 RIMBP3CA6NJZ7 1639 aa28.87■■■□□ 2.21
AC027088.1-201ENST00000557966 RIMBP3BA6NNM3 1639 aa28.87■■■□□ 2.21
AC027088.1-201ENST00000557966 RIMBP3Q9UFD9 1639 aa28.87■■■□□ 2.21
AC027088.1-201ENST00000557966 GRIN2BQ13224 1484 aa28.83■■■□□ 2.21
AC027088.1-201ENST00000557966 ABCA10Q8WWZ4 1543 aa28.82■■■□□ 2.2
AC027088.1-201ENST00000557966 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
AC027088.1-201ENST00000557966 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
AC027088.1-201ENST00000557966 FBLN2P98095 1184 aa28.81■■■□□ 2.2
AC027088.1-201ENST00000557966 ARHGEF11O15085 1522 aa28.8■■■□□ 2.2
AC027088.1-201ENST00000557966 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
AC027088.1-201ENST00000557966 TOP2BQ02880 1626 aa28.8■■■□□ 2.2
AC027088.1-201ENST00000557966 MAGI1Q96QZ7 1491 aaPredicted RBP28.79■■■□□ 2.2
AC027088.1-201ENST00000557966 ABCA5Q8WWZ7 1642 aa28.78■■■□□ 2.2
AC027088.1-201ENST00000557966 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
AC027088.1-201ENST00000557966 GAPVD1Q14C86 1478 aa28.77■■■□□ 2.2
AC027088.1-201ENST00000557966 SYNJ2O15056 1496 aa28.7■■■□□ 2.18
AC027088.1-201ENST00000557966 CLASP1Q7Z460 1538 aa28.67■■■□□ 2.18
AC027088.1-201ENST00000557966 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
AC027088.1-201ENST00000557966 ARAP1Q96P48 1450 aa28.57■■■□□ 2.16
AC027088.1-201ENST00000557966 ADAMTS12P58397 1594 aa28.54■■■□□ 2.16
AC027088.1-201ENST00000557966 CYB5RLQ6IPT4 315 aa28.49■■■□□ 2.15
AC027088.1-201ENST00000557966 GRIN2AQ12879 1464 aa28.47■■■□□ 2.15
AC027088.1-201ENST00000557966 ERICH3Q5RHP9 1530 aa28.46■■■□□ 2.15
AC027088.1-201ENST00000557966 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
AC027088.1-201ENST00000557966 CEP170Q5SW79 1584 aa28.4■■■□□ 2.14
AC027088.1-201ENST00000557966 NUP160Q12769 1436 aa28.38■■■□□ 2.13
AC027088.1-201ENST00000557966 ERCC6L2Q5T890 1561 aa28.27■■■□□ 2.12
AC027088.1-201ENST00000557966 SHROOM2Q13796 1616 aa28.22■■■□□ 2.11
AC027088.1-201ENST00000557966 KIF27Q86VH2 1401 aa28.2■■■□□ 2.11
AC027088.1-201ENST00000557966 IGF1RP08069 1367 aa28.16■■■□□ 2.1
AC027088.1-201ENST00000557966 RUSC2Q8N2Y8 1516 aa28.14■■■□□ 2.1
AC027088.1-201ENST00000557966 CUL7Q14999 1698 aa28.12■■■□□ 2.09
AC027088.1-201ENST00000557966 PRG4Q92954 1404 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms