RNA–Protein interactions for RNA: ENST00000557558.1

AC016266.1-201, humanhuman

TSL 3 BASIC

Gene AC016266.1, Length 729 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016266.1-201ENST00000557558 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
AC016266.1-201ENST00000557558 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
AC016266.1-201ENST00000557558 ABCC9O60706 1549 aa29.32■■■□□ 2.28
AC016266.1-201ENST00000557558 RB1CC1Q8TDY2 1594 aa28.1■■■□□ 2.09
AC016266.1-201ENST00000557558 NACADO15069 1562 aa28■■■□□ 2.07
AC016266.1-201ENST00000557558 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
AC016266.1-201ENST00000557558 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
AC016266.1-201ENST00000557558 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
AC016266.1-201ENST00000557558 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
AC016266.1-201ENST00000557558 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
AC016266.1-201ENST00000557558 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
AC016266.1-201ENST00000557558 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
AC016266.1-201ENST00000557558 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.93
AC016266.1-201ENST00000557558 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
AC016266.1-201ENST00000557558 SCRIBQ14160 1630 aa26.97■■□□□ 1.91
AC016266.1-201ENST00000557558 EIF4G1Q04637 1599 aaKnown RBP26.52■■□□□ 1.84
AC016266.1-201ENST00000557558 CC2D2AQ9P2K1 1620 aa26.47■■□□□ 1.83
AC016266.1-201ENST00000557558 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
AC016266.1-201ENST00000557558 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
AC016266.1-201ENST00000557558 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
AC016266.1-201ENST00000557558 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
AC016266.1-201ENST00000557558 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
AC016266.1-201ENST00000557558 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
AC016266.1-201ENST00000557558 HMGXB3Q12766 1538 aa25.64■■□□□ 1.7
AC016266.1-201ENST00000557558 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
AC016266.1-201ENST00000557558 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
AC016266.1-201ENST00000557558 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
AC016266.1-201ENST00000557558 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
AC016266.1-201ENST00000557558 NESP48681 1621 aa25.23■■□□□ 1.63
AC016266.1-201ENST00000557558 CUX2O14529 1486 aa25.21■■□□□ 1.63
AC016266.1-201ENST00000557558 WIZO95785 1651 aa25.2■■□□□ 1.62
AC016266.1-201ENST00000557558 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
AC016266.1-201ENST00000557558 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
AC016266.1-201ENST00000557558 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
AC016266.1-201ENST00000557558 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
AC016266.1-201ENST00000557558 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
AC016266.1-201ENST00000557558 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
AC016266.1-201ENST00000557558 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
AC016266.1-201ENST00000557558 DNAJC5Q9H3Z4 198 aa24.85■■□□□ 1.57
AC016266.1-201ENST00000557558 CFTRP13569 1480 aa24.84■■□□□ 1.57
AC016266.1-201ENST00000557558 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
AC016266.1-201ENST00000557558 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
AC016266.1-201ENST00000557558 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
AC016266.1-201ENST00000557558 WDR62O43379 1518 aa24.7■■□□□ 1.54
AC016266.1-201ENST00000557558 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
AC016266.1-201ENST00000557558 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
AC016266.1-201ENST00000557558 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
AC016266.1-201ENST00000557558 ABCC8Q09428 1581 aa24.41■■□□□ 1.5
AC016266.1-201ENST00000557558 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
AC016266.1-201ENST00000557558 TOPBP1Q92547 1522 aa24.31■■□□□ 1.48
AC016266.1-201ENST00000557558 IFT140Q96RY7 1462 aa24.3■■□□□ 1.48
AC016266.1-201ENST00000557558 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
AC016266.1-201ENST00000557558 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
AC016266.1-201ENST00000557558 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
AC016266.1-201ENST00000557558 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
AC016266.1-201ENST00000557558 SOGA1O94964 1423 aa24.05■■□□□ 1.44
AC016266.1-201ENST00000557558 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
AC016266.1-201ENST00000557558 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
AC016266.1-201ENST00000557558 AQRO60306 1485 aaKnown RBP eCLIP23.99■■□□□ 1.43
AC016266.1-201ENST00000557558 FGD5Q6ZNL6 1462 aa23.98■■□□□ 1.43
AC016266.1-201ENST00000557558 CUX1P39880 1505 aa23.97■■□□□ 1.43
AC016266.1-201ENST00000557558 RAD54L2Q9Y4B4 1467 aa23.96■■□□□ 1.43
AC016266.1-201ENST00000557558 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
AC016266.1-201ENST00000557558 WDR97A6NE52 1622 aa23.9■■□□□ 1.42
AC016266.1-201ENST00000557558 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
AC016266.1-201ENST00000557558 FBLN2P98095 1184 aa23.88■■□□□ 1.41
AC016266.1-201ENST00000557558 GRIN2BQ13224 1484 aa23.8■■□□□ 1.4
AC016266.1-201ENST00000557558 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
AC016266.1-201ENST00000557558 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
AC016266.1-201ENST00000557558 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
AC016266.1-201ENST00000557558 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
AC016266.1-201ENST00000557558 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
AC016266.1-201ENST00000557558 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
AC016266.1-201ENST00000557558 CHD1O14646 1710 aa23.71■■□□□ 1.39
AC016266.1-201ENST00000557558 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
AC016266.1-201ENST00000557558 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
AC016266.1-201ENST00000557558 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
AC016266.1-201ENST00000557558 ARHGEF11O15085 1522 aa23.66■■□□□ 1.38
AC016266.1-201ENST00000557558 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
AC016266.1-201ENST00000557558 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
AC016266.1-201ENST00000557558 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
AC016266.1-201ENST00000557558 SYNJ1O43426 1573 aa23.62■■□□□ 1.37
AC016266.1-201ENST00000557558 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
AC016266.1-201ENST00000557558 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
AC016266.1-201ENST00000557558 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
AC016266.1-201ENST00000557558 CLASP1Q7Z460 1538 aa23.5■■□□□ 1.35
AC016266.1-201ENST00000557558 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
AC016266.1-201ENST00000557558 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
AC016266.1-201ENST00000557558 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
AC016266.1-201ENST00000557558 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
AC016266.1-201ENST00000557558 ADAMTS12P58397 1594 aa23.42■■□□□ 1.34
AC016266.1-201ENST00000557558 NUP160Q12769 1436 aa23.36■■□□□ 1.33
AC016266.1-201ENST00000557558 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
AC016266.1-201ENST00000557558 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
AC016266.1-201ENST00000557558 IGF1RP08069 1367 aa23.25■■□□□ 1.31
AC016266.1-201ENST00000557558 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
AC016266.1-201ENST00000557558 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
AC016266.1-201ENST00000557558 CUL7Q14999 1698 aa23.16■■□□□ 1.3
AC016266.1-201ENST00000557558 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
AC016266.1-201ENST00000557558 PRG4Q92954 1404 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms