RNA–Protein interactions for RNA: ENST00000557154.5

SRSF5-217, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SRSF5, Length 1,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-217ENST00000557154 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
SRSF5-217ENST00000557154 ABCC9O60706 1549 aa22.66■■□□□ 1.22
SRSF5-217ENST00000557154 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.21
SRSF5-217ENST00000557154 RB1CC1Q8TDY2 1594 aa21.58■■□□□ 1.04
SRSF5-217ENST00000557154 NACADO15069 1562 aa21.41■■□□□ 1.02
SRSF5-217ENST00000557154 DNAJC5BQ9UF47 199 aa21.34■■□□□ 1.01
SRSF5-217ENST00000557154 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
SRSF5-217ENST00000557154 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
SRSF5-217ENST00000557154 UNC13AQ9UPW8 1703 aa21.1■□□□□ 0.97
SRSF5-217ENST00000557154 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.965e-9■■■■□ 23.4
SRSF5-217ENST00000557154 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
SRSF5-217ENST00000557154 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
SRSF5-217ENST00000557154 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
SRSF5-217ENST00000557154 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
SRSF5-217ENST00000557154 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
SRSF5-217ENST00000557154 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
SRSF5-217ENST00000557154 EIF4G1Q04637 1599 aaKnown RBP20.45■□□□□ 0.86
SRSF5-217ENST00000557154 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
SRSF5-217ENST00000557154 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
SRSF5-217ENST00000557154 DNAJC5Q9H3Z4 198 aa19.72■□□□□ 0.75
SRSF5-217ENST00000557154 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
SRSF5-217ENST00000557154 CUX2O14529 1486 aa19.65■□□□□ 0.74
SRSF5-217ENST00000557154 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
SRSF5-217ENST00000557154 SMARCA4P51532 1647 aa19.63■□□□□ 0.73
SRSF5-217ENST00000557154 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
SRSF5-217ENST00000557154 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
SRSF5-217ENST00000557154 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
SRSF5-217ENST00000557154 PEG3Q9GZU2 1588 aa19.47■□□□□ 0.71
SRSF5-217ENST00000557154 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
SRSF5-217ENST00000557154 NESP48681 1621 aa19.44■□□□□ 0.7
SRSF5-217ENST00000557154 LAMC3Q9Y6N6 1575 aa19.34■□□□□ 0.69
SRSF5-217ENST00000557154 MROH2BQ7Z745 1585 aa19.33■□□□□ 0.68
SRSF5-217ENST00000557154 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.68
SRSF5-217ENST00000557154 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
SRSF5-217ENST00000557154 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
SRSF5-217ENST00000557154 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
SRSF5-217ENST00000557154 WIZO95785 1651 aa19.09■□□□□ 0.65
SRSF5-217ENST00000557154 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
SRSF5-217ENST00000557154 WDR62O43379 1518 aa19.04■□□□□ 0.64
SRSF5-217ENST00000557154 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
SRSF5-217ENST00000557154 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
SRSF5-217ENST00000557154 CFTRP13569 1480 aa18.91■□□□□ 0.62
SRSF5-217ENST00000557154 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
SRSF5-217ENST00000557154 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
SRSF5-217ENST00000557154 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
SRSF5-217ENST00000557154 TRIM41Q8WV44 630 aa18.74■□□□□ 0.59
SRSF5-217ENST00000557154 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
SRSF5-217ENST00000557154 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
SRSF5-217ENST00000557154 CCDC88BA6NC98 1476 aa18.62■□□□□ 0.57
SRSF5-217ENST00000557154 IFT140Q96RY7 1462 aa18.58■□□□□ 0.57
SRSF5-217ENST00000557154 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
SRSF5-217ENST00000557154 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
SRSF5-217ENST00000557154 ABCC8Q09428 1581 aa18.52■□□□□ 0.55
SRSF5-217ENST00000557154 DNMBPQ6XZF7 1577 aa18.48■□□□□ 0.55
SRSF5-217ENST00000557154 RIMBP3CA6NJZ7 1639 aa18.47■□□□□ 0.55
SRSF5-217ENST00000557154 RIMBP3BA6NNM3 1639 aa18.47■□□□□ 0.55
SRSF5-217ENST00000557154 RIMBP3Q9UFD9 1639 aa18.47■□□□□ 0.55
SRSF5-217ENST00000557154 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
SRSF5-217ENST00000557154 ARHGEF11O15085 1522 aa18.41■□□□□ 0.54
SRSF5-217ENST00000557154 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
SRSF5-217ENST00000557154 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
SRSF5-217ENST00000557154 CHD1O14646 1710 aa18.35■□□□□ 0.53
SRSF5-217ENST00000557154 AQRO60306 1485 aaKnown RBP eCLIP18.34■□□□□ 0.533e-8■■■■□ 24.7
SRSF5-217ENST00000557154 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
SRSF5-217ENST00000557154 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
SRSF5-217ENST00000557154 SOGA1O94964 1423 aa18.23■□□□□ 0.51
SRSF5-217ENST00000557154 FGD5Q6ZNL6 1462 aa18.21■□□□□ 0.51
SRSF5-217ENST00000557154 ARAP1Q96P48 1450 aa18.21■□□□□ 0.51
SRSF5-217ENST00000557154 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
SRSF5-217ENST00000557154 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
SRSF5-217ENST00000557154 FBLN2P98095 1184 aa18.2■□□□□ 0.5
SRSF5-217ENST00000557154 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
SRSF5-217ENST00000557154 CUX1P39880 1505 aa18.17■□□□□ 0.5
SRSF5-217ENST00000557154 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
SRSF5-217ENST00000557154 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
SRSF5-217ENST00000557154 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
SRSF5-217ENST00000557154 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
SRSF5-217ENST00000557154 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
SRSF5-217ENST00000557154 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
SRSF5-217ENST00000557154 PBRM1Q86U86 1689 aa18.05■□□□□ 0.48
SRSF5-217ENST00000557154 TRHP20396 242 aaPredicted RBP18.03■□□□□ 0.48
SRSF5-217ENST00000557154 GAPVD1Q14C86 1478 aa18.03■□□□□ 0.48
SRSF5-217ENST00000557154 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.48
SRSF5-217ENST00000557154 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
SRSF5-217ENST00000557154 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
SRSF5-217ENST00000557154 GRIN2AQ12879 1464 aa17.89■□□□□ 0.46
SRSF5-217ENST00000557154 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
SRSF5-217ENST00000557154 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
SRSF5-217ENST00000557154 TOP2BQ02880 1626 aa17.88■□□□□ 0.45
SRSF5-217ENST00000557154 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
SRSF5-217ENST00000557154 NUP160Q12769 1436 aa17.85■□□□□ 0.45
SRSF5-217ENST00000557154 CEP170Q5SW79 1584 aa17.83■□□□□ 0.45
SRSF5-217ENST00000557154 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
SRSF5-217ENST00000557154 FHAD1B1AJZ9 1412 aa17.8■□□□□ 0.44
SRSF5-217ENST00000557154 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
SRSF5-217ENST00000557154 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
SRSF5-217ENST00000557154 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
SRSF5-217ENST00000557154 RUSC2Q8N2Y8 1516 aa17.64■□□□□ 0.41
SRSF5-217ENST00000557154 KIF13AQ9H1H9 1805 aa17.61■□□□□ 0.41
SRSF5-217ENST00000557154 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms