RNA–Protein interactions for RNA: ENST00000556955.5

SERPINA1-215, Transcript of serpin family A member 1, humanhuman

TSL 4

Gene SERPINA1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-215ENST00000556955 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
SERPINA1-215ENST00000556955 ABCC9O60706 1549 aa30.24■■■□□ 2.43
SERPINA1-215ENST00000556955 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
SERPINA1-215ENST00000556955 DNAJC5BQ9UF47 199 aa29.32■■■□□ 2.28
SERPINA1-215ENST00000556955 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.14
SERPINA1-215ENST00000556955 NACADO15069 1562 aa28.33■■■□□ 2.13
SERPINA1-215ENST00000556955 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
SERPINA1-215ENST00000556955 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
SERPINA1-215ENST00000556955 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
SERPINA1-215ENST00000556955 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
SERPINA1-215ENST00000556955 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
SERPINA1-215ENST00000556955 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
SERPINA1-215ENST00000556955 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
SERPINA1-215ENST00000556955 SCRIBQ14160 1630 aa27.56■■■□□ 2
SERPINA1-215ENST00000556955 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
SERPINA1-215ENST00000556955 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
SERPINA1-215ENST00000556955 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
SERPINA1-215ENST00000556955 CC2D2AQ9P2K1 1620 aa27.21■■□□□ 1.95
SERPINA1-215ENST00000556955 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
SERPINA1-215ENST00000556955 CUX2O14529 1486 aa26.49■■□□□ 1.83
SERPINA1-215ENST00000556955 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
SERPINA1-215ENST00000556955 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
SERPINA1-215ENST00000556955 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
SERPINA1-215ENST00000556955 ERCC6Q03468 1493 aa26.25■■□□□ 1.79
SERPINA1-215ENST00000556955 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
SERPINA1-215ENST00000556955 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
SERPINA1-215ENST00000556955 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
SERPINA1-215ENST00000556955 NCAPD3P42695 1498 aa26.09■■□□□ 1.77
SERPINA1-215ENST00000556955 PEG3Q9GZU2 1588 aa26.06■■□□□ 1.76
SERPINA1-215ENST00000556955 HMGXB3Q12766 1538 aa26.05■■□□□ 1.76
SERPINA1-215ENST00000556955 BAZ1BQ9UIG0 1483 aaKnown RBP25.96■■□□□ 1.75
SERPINA1-215ENST00000556955 WIZO95785 1651 aa25.85■■□□□ 1.73
SERPINA1-215ENST00000556955 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
SERPINA1-215ENST00000556955 NESP48681 1621 aa25.6■■□□□ 1.69
SERPINA1-215ENST00000556955 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
SERPINA1-215ENST00000556955 THOC2Q8NI27 1593 aaKnown RBP25.54■■□□□ 1.68
SERPINA1-215ENST00000556955 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
SERPINA1-215ENST00000556955 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
SERPINA1-215ENST00000556955 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
SERPINA1-215ENST00000556955 PDS5BQ9NTI5 1447 aa25.25■■□□□ 1.63
SERPINA1-215ENST00000556955 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
SERPINA1-215ENST00000556955 CFTRP13569 1480 aa25.21■■□□□ 1.63
SERPINA1-215ENST00000556955 OSCARQ8IYS5 282 aa25.14■■□□□ 1.62
SERPINA1-215ENST00000556955 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
SERPINA1-215ENST00000556955 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
SERPINA1-215ENST00000556955 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
SERPINA1-215ENST00000556955 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
SERPINA1-215ENST00000556955 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
SERPINA1-215ENST00000556955 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
SERPINA1-215ENST00000556955 WDR62O43379 1518 aa24.98■■□□□ 1.59
SERPINA1-215ENST00000556955 RIMBP3CA6NJZ7 1639 aa24.93■■□□□ 1.58
SERPINA1-215ENST00000556955 RIMBP3BA6NNM3 1639 aa24.93■■□□□ 1.58
SERPINA1-215ENST00000556955 RIMBP3Q9UFD9 1639 aa24.93■■□□□ 1.58
SERPINA1-215ENST00000556955 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
SERPINA1-215ENST00000556955 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
SERPINA1-215ENST00000556955 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
SERPINA1-215ENST00000556955 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
SERPINA1-215ENST00000556955 TOPBP1Q92547 1522 aa24.69■■□□□ 1.54
SERPINA1-215ENST00000556955 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
SERPINA1-215ENST00000556955 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
SERPINA1-215ENST00000556955 IFT140Q96RY7 1462 aa24.53■■□□□ 1.52
SERPINA1-215ENST00000556955 CUX1P39880 1505 aa24.51■■□□□ 1.51
SERPINA1-215ENST00000556955 POLA1P09884 1462 aaPredicted RBP24.48■■□□□ 1.51
SERPINA1-215ENST00000556955 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
SERPINA1-215ENST00000556955 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
SERPINA1-215ENST00000556955 ZNF608Q9ULD9 1512 aaPredicted RBP24.42■■□□□ 1.5
SERPINA1-215ENST00000556955 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
SERPINA1-215ENST00000556955 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
SERPINA1-215ENST00000556955 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
SERPINA1-215ENST00000556955 BIVM-ERCC5R4GMW8 1640 aa24.34■■□□□ 1.49
SERPINA1-215ENST00000556955 SOGA1O94964 1423 aa24.33■■□□□ 1.49
SERPINA1-215ENST00000556955 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
SERPINA1-215ENST00000556955 SYNJ1O43426 1573 aa24.33■■□□□ 1.48
SERPINA1-215ENST00000556955 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
SERPINA1-215ENST00000556955 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
SERPINA1-215ENST00000556955 AQRO60306 1485 aaKnown RBP eCLIP24.25■■□□□ 1.473e-14■■■■■ 33.4
SERPINA1-215ENST00000556955 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
SERPINA1-215ENST00000556955 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
SERPINA1-215ENST00000556955 CHD1O14646 1710 aa24.18■■□□□ 1.46
SERPINA1-215ENST00000556955 ABCA5Q8WWZ7 1642 aa24.14■■□□□ 1.46
SERPINA1-215ENST00000556955 FBLN2P98095 1184 aa24.14■■□□□ 1.45
SERPINA1-215ENST00000556955 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
SERPINA1-215ENST00000556955 GRIN2BQ13224 1484 aa24.09■■□□□ 1.45
SERPINA1-215ENST00000556955 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
SERPINA1-215ENST00000556955 GAPVD1Q14C86 1478 aa24.08■■□□□ 1.45
SERPINA1-215ENST00000556955 ILDR1Q86SU0 546 aaPredicted RBP24.06■■□□□ 1.44
SERPINA1-215ENST00000556955 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
SERPINA1-215ENST00000556955 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
SERPINA1-215ENST00000556955 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
SERPINA1-215ENST00000556955 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
SERPINA1-215ENST00000556955 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
SERPINA1-215ENST00000556955 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
SERPINA1-215ENST00000556955 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
SERPINA1-215ENST00000556955 GRIN2AQ12879 1464 aa23.8■■□□□ 1.4
SERPINA1-215ENST00000556955 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
SERPINA1-215ENST00000556955 CUL7Q14999 1698 aa23.73■■□□□ 1.39
SERPINA1-215ENST00000556955 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
SERPINA1-215ENST00000556955 NUP160Q12769 1436 aa23.67■■□□□ 1.38
SERPINA1-215ENST00000556955 IGF1RP08069 1367 aa23.65■■□□□ 1.38
SERPINA1-215ENST00000556955 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms