RNA–Protein interactions for RNA: ENST00000556955.5

SERPINA1-215, Transcript of serpin family A member 1, humanhuman

TSL 4

Gene SERPINA1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-215ENST00000556955 SND1Q7KZF4 910 aaKnown RBP eCLIP14.4□□□□□ -0.11e-323■■■■■ 34
SERPINA1-215ENST00000556955 DDX3XO00571 662 aaKnown RBP eCLIP14.37□□□□□ -0.111e-323■□□□□ 9.9
SERPINA1-215ENST00000556955 NIP7Q9Y221 180 aaKnown RBP eCLIP17.98■□□□□ 0.472e-66■□□□□ 9.8
SERPINA1-215ENST00000556955 PCBP1Q15365 356 aaKnown RBP eCLIP15.39■□□□□ 0.051e-61■□□□□ 10.7
SERPINA1-215ENST00000556955 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.247e-59■■■□□ 17.4
SERPINA1-215ENST00000556955 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.69■□□□□ 0.13e-42■■■■■ 57.3
SERPINA1-215ENST00000556955 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.21e-37■■■■□ 22
SERPINA1-215ENST00000556955 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.31e-31■□□□□ 8.3
SERPINA1-215ENST00000556955 EFTUD2Q15029 972 aaKnown RBP eCLIP13.38□□□□□ -0.274e-26■■■■□ 22.5
SERPINA1-215ENST00000556955 IGF2BP3O00425 579 aaKnown RBP eCLIP16.73■□□□□ 0.272e-23■■■■■ 29
SERPINA1-215ENST00000556955 PRPF4O43172 522 aaKnown RBP eCLIP13.23□□□□□ -0.292e-21■■■■□ 20.3
SERPINA1-215ENST00000556955 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.77□□□□□ -0.531e-19■■■□□ 15.2
SERPINA1-215ENST00000556955 SF3A3Q12874 501 aaKnown RBP eCLIP12.57□□□□□ -0.47e-19■■■■■ 35.8
SERPINA1-215ENST00000556955 NCBP2P52298 156 aaKnown RBP eCLIP12.84□□□□□ -0.357e-18■■■■■ 36.5
SERPINA1-215ENST00000556955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.32■■□□□ 1.163e-14■■□□□ 12.5
SERPINA1-215ENST00000556955 AQRO60306 1485 aaKnown RBP eCLIP24.25■■□□□ 1.473e-14■■■■■ 33.4
SERPINA1-215ENST00000556955 QKIQ96PU8 341 aaKnown RBP eCLIP13.98□□□□□ -0.171e-12■□□□□ 8.7
SERPINA1-215ENST00000556955 HNRNPKP61978 463 aaKnown RBP eCLIP13.9□□□□□ -0.183e-8■■□□□ 11.6
SERPINA1-215ENST00000556955 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.67□□□□□ -0.226e-8■■■□□ 16.5
SERPINA1-215ENST00000556955 RBM5P52756 815 aaKnown RBP eCLIP17.12■□□□□ 0.332e-7■□□□□ 8.3
SERPINA1-215ENST00000556955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.192e-7■■■■□ 19.3
SERPINA1-215ENST00000556955 TIAL1Q01085 375 aaKnown RBP eCLIP13.42□□□□□ -0.263e-7■■■■□ 19.4
SERPINA1-215ENST00000556955 AATFQ9NY61 560 aaKnown RBP eCLIP16.9■□□□□ 0.33e-7■■■■■ 64.5
Retrieved 23 of 23 RNA–protein pairs in 9.3 ms