RNA–Protein interactions for RNA: ENST00000556664.1

NFKBIA-206, Transcript of NFKB inhibitor alpha, humanhuman

TSL 2

Gene NFKBIA, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-206ENST00000556664 NISCHQ9Y2I1 1504 aa27.79■■■□□ 2.04
NFKBIA-206ENST00000556664 ABCC9O60706 1549 aa25.89■■□□□ 1.74
NFKBIA-206ENST00000556664 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
NFKBIA-206ENST00000556664 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
NFKBIA-206ENST00000556664 RB1CC1Q8TDY2 1594 aa24.24■■□□□ 1.47
NFKBIA-206ENST00000556664 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
NFKBIA-206ENST00000556664 NACADO15069 1562 aa23.86■■□□□ 1.41
NFKBIA-206ENST00000556664 DCAF8L2P0C7V8 631 aa23.66■■□□□ 1.38
NFKBIA-206ENST00000556664 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
NFKBIA-206ENST00000556664 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.37
NFKBIA-206ENST00000556664 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
NFKBIA-206ENST00000556664 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
NFKBIA-206ENST00000556664 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.32
NFKBIA-206ENST00000556664 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
NFKBIA-206ENST00000556664 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
NFKBIA-206ENST00000556664 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
NFKBIA-206ENST00000556664 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
NFKBIA-206ENST00000556664 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
NFKBIA-206ENST00000556664 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
NFKBIA-206ENST00000556664 CUX2O14529 1486 aa22.64■■□□□ 1.21
NFKBIA-206ENST00000556664 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
NFKBIA-206ENST00000556664 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
NFKBIA-206ENST00000556664 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
NFKBIA-206ENST00000556664 NESP48681 1621 aa21.99■■□□□ 1.11
NFKBIA-206ENST00000556664 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
NFKBIA-206ENST00000556664 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
NFKBIA-206ENST00000556664 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
NFKBIA-206ENST00000556664 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
NFKBIA-206ENST00000556664 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
NFKBIA-206ENST00000556664 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
NFKBIA-206ENST00000556664 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
NFKBIA-206ENST00000556664 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
NFKBIA-206ENST00000556664 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
NFKBIA-206ENST00000556664 BAZ1AQ9NRL2 1556 aaPredicted RBP21.58■■□□□ 1.05
NFKBIA-206ENST00000556664 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
NFKBIA-206ENST00000556664 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
NFKBIA-206ENST00000556664 WDR62O43379 1518 aa21.43■■□□□ 1.02
NFKBIA-206ENST00000556664 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
NFKBIA-206ENST00000556664 MROH2BQ7Z745 1585 aa21.38■■□□□ 1.01
NFKBIA-206ENST00000556664 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
NFKBIA-206ENST00000556664 RIMBP3CA6NJZ7 1639 aa21.28■■□□□ 1
NFKBIA-206ENST00000556664 RIMBP3BA6NNM3 1639 aa21.28■■□□□ 1
NFKBIA-206ENST00000556664 RIMBP3Q9UFD9 1639 aa21.28■■□□□ 1
NFKBIA-206ENST00000556664 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
NFKBIA-206ENST00000556664 WIZO95785 1651 aa21.18■□□□□ 0.98
NFKBIA-206ENST00000556664 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
NFKBIA-206ENST00000556664 TRHP20396 242 aaPredicted RBP21.15■□□□□ 0.98
NFKBIA-206ENST00000556664 ARHGEF11O15085 1522 aa21.14■□□□□ 0.97
NFKBIA-206ENST00000556664 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
NFKBIA-206ENST00000556664 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
NFKBIA-206ENST00000556664 CYB5RLQ6IPT4 315 aa21.09■□□□□ 0.97
NFKBIA-206ENST00000556664 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
NFKBIA-206ENST00000556664 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
NFKBIA-206ENST00000556664 CFTRP13569 1480 aa20.92■□□□□ 0.94
NFKBIA-206ENST00000556664 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
NFKBIA-206ENST00000556664 ARAP1Q96P48 1450 aa20.87■□□□□ 0.93
NFKBIA-206ENST00000556664 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
NFKBIA-206ENST00000556664 EIF4G3O43432 1585 aaKnown RBP20.69■□□□□ 0.9
NFKBIA-206ENST00000556664 CHD1O14646 1710 aa20.69■□□□□ 0.9
NFKBIA-206ENST00000556664 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
NFKBIA-206ENST00000556664 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
NFKBIA-206ENST00000556664 FBLN2P98095 1184 aa20.67■□□□□ 0.9
NFKBIA-206ENST00000556664 TOPBP1Q92547 1522 aa20.6■□□□□ 0.89
NFKBIA-206ENST00000556664 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.892e-8■■■■■ 27.3
NFKBIA-206ENST00000556664 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
NFKBIA-206ENST00000556664 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
NFKBIA-206ENST00000556664 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
NFKBIA-206ENST00000556664 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
NFKBIA-206ENST00000556664 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
NFKBIA-206ENST00000556664 ILDR1Q86SU0 546 aaPredicted RBP20.36■□□□□ 0.85
NFKBIA-206ENST00000556664 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
NFKBIA-206ENST00000556664 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
NFKBIA-206ENST00000556664 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
NFKBIA-206ENST00000556664 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
NFKBIA-206ENST00000556664 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
NFKBIA-206ENST00000556664 GAPVD1Q14C86 1478 aa20.32■□□□□ 0.84
NFKBIA-206ENST00000556664 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
NFKBIA-206ENST00000556664 SOGA1O94964 1423 aa20.26■□□□□ 0.83
NFKBIA-206ENST00000556664 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
NFKBIA-206ENST00000556664 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
NFKBIA-206ENST00000556664 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
NFKBIA-206ENST00000556664 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
NFKBIA-206ENST00000556664 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
NFKBIA-206ENST00000556664 KDM4FA0A1W2PPD8 638 aa20.08■□□□□ 0.81
NFKBIA-206ENST00000556664 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.8
NFKBIA-206ENST00000556664 CUX1P39880 1505 aa20.07■□□□□ 0.8
NFKBIA-206ENST00000556664 KIF13AQ9H1H9 1805 aa20.06■□□□□ 0.8
NFKBIA-206ENST00000556664 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
NFKBIA-206ENST00000556664 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
NFKBIA-206ENST00000556664 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
NFKBIA-206ENST00000556664 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
NFKBIA-206ENST00000556664 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
NFKBIA-206ENST00000556664 FAM69CQ0P6D2 419 aa19.94■□□□□ 0.78
NFKBIA-206ENST00000556664 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
NFKBIA-206ENST00000556664 ABCC10Q5T3U5 1492 aa19.88■□□□□ 0.77
NFKBIA-206ENST00000556664 NUP160Q12769 1436 aa19.86■□□□□ 0.77
NFKBIA-206ENST00000556664 KDM6BO15054 1643 aa19.85■□□□□ 0.77
NFKBIA-206ENST00000556664 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
NFKBIA-206ENST00000556664 ABCA10Q8WWZ4 1543 aa19.84■□□□□ 0.77
NFKBIA-206ENST00000556664 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms