RNA–Protein interactions for RNA: ENST00000556454.1

CLMN-207, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 3,023 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-207ENST00000556454 NISCHQ9Y2I1 1504 aa18.99■□□□□ 0.63
CLMN-207ENST00000556454 HRCP23327 699 aa17.67■□□□□ 0.42
CLMN-207ENST00000556454 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.39
CLMN-207ENST00000556454 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
CLMN-207ENST00000556454 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
CLMN-207ENST00000556454 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
CLMN-207ENST00000556454 MYT1Q01538 1121 aa16.95■□□□□ 0.3
CLMN-207ENST00000556454 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
CLMN-207ENST00000556454 DCAF1Q9Y4B6 1507 aa16.82■□□□□ 0.28
CLMN-207ENST00000556454 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
CLMN-207ENST00000556454 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
CLMN-207ENST00000556454 SHROOM4Q9ULL8 1493 aa16.72■□□□□ 0.27
CLMN-207ENST00000556454 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
CLMN-207ENST00000556454 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
CLMN-207ENST00000556454 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
CLMN-207ENST00000556454 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
CLMN-207ENST00000556454 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
CLMN-207ENST00000556454 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
CLMN-207ENST00000556454 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
CLMN-207ENST00000556454 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
CLMN-207ENST00000556454 CENPBP07199 599 aaPredicted RBP16.07■□□□□ 0.16
CLMN-207ENST00000556454 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
CLMN-207ENST00000556454 DIEXFQ68CQ4 756 aaKnown RBP15.87■□□□□ 0.13
CLMN-207ENST00000556454 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
CLMN-207ENST00000556454 BCL11AQ9H165 835 aa15.69■□□□□ 0.1
CLMN-207ENST00000556454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.68■□□□□ 0.1
CLMN-207ENST00000556454 CCER1Q8TC90 406 aaPredicted RBP15.68■□□□□ 0.1
CLMN-207ENST00000556454 ANP32EQ9BTT0 268 aa15.57■□□□□ 0.08
CLMN-207ENST00000556454 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
CLMN-207ENST00000556454 ZNF316A6NFI3 1004 aaPredicted RBP15.54■□□□□ 0.08
CLMN-207ENST00000556454 ABCC9O60706 1549 aa15.52■□□□□ 0.08
CLMN-207ENST00000556454 YTHDC1Q96MU7 727 aaKnown RBP15.5■□□□□ 0.07
CLMN-207ENST00000556454 CLSPNQ9HAW4 1339 aa15.49■□□□□ 0.07
CLMN-207ENST00000556454 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
CLMN-207ENST00000556454 MIER1Q8N108 512 aa15.43■□□□□ 0.06
CLMN-207ENST00000556454 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
CLMN-207ENST00000556454 SUPT16HQ9Y5B9 1047 aaKnown RBP15.37■□□□□ 0.05
CLMN-207ENST00000556454 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
CLMN-207ENST00000556454 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
CLMN-207ENST00000556454 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.05
CLMN-207ENST00000556454 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
CLMN-207ENST00000556454 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
CLMN-207ENST00000556454 PRKCSHP14314 528 aaPredicted RBP15.25■□□□□ 0.03
CLMN-207ENST00000556454 CEP162Q5TB80 1403 aa15.07■□□□□ 0
CLMN-207ENST00000556454 EIF4G1Q04637 1599 aaKnown RBP15.04■□□□□ -0
CLMN-207ENST00000556454 TNIKQ9UKE5 1360 aa14.98□□□□□ -0.01
CLMN-207ENST00000556454 ERICH6Q7L0X2 663 aa14.98□□□□□ -0.01
CLMN-207ENST00000556454 RBM19Q9Y4C8 960 aaKnown RBP14.97□□□□□ -0.01
CLMN-207ENST00000556454 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
CLMN-207ENST00000556454 MSH5O43196 834 aa14.88□□□□□ -0.03
CLMN-207ENST00000556454 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
CLMN-207ENST00000556454 BCANQ96GW7 911 aa14.84□□□□□ -0.03
CLMN-207ENST00000556454 APLP2Q06481 763 aa14.84□□□□□ -0.03
CLMN-207ENST00000556454 FKBP8Q14318 412 aa14.83□□□□□ -0.04
CLMN-207ENST00000556454 NACADO15069 1562 aa14.83□□□□□ -0.04
CLMN-207ENST00000556454 MYT1LQ9UL68 1186 aa14.82□□□□□ -0.04
CLMN-207ENST00000556454 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
CLMN-207ENST00000556454 FANCIQ9NVI1 1328 aa14.82□□□□□ -0.04
CLMN-207ENST00000556454 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
CLMN-207ENST00000556454 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
CLMN-207ENST00000556454 EEA1Q15075 1411 aa14.81□□□□□ -0.04
CLMN-207ENST00000556454 WIZO95785 1651 aa14.8□□□□□ -0.04
CLMN-207ENST00000556454 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
CLMN-207ENST00000556454 DHX57Q6P158 1386 aaKnown RBP14.77□□□□□ -0.04
CLMN-207ENST00000556454 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
CLMN-207ENST00000556454 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
CLMN-207ENST00000556454 SOGA1O94964 1423 aa14.75□□□□□ -0.05
CLMN-207ENST00000556454 KCNH8Q96L42 1107 aa14.73□□□□□ -0.05
CLMN-207ENST00000556454 NEFLP07196 543 aa14.71□□□□□ -0.06
CLMN-207ENST00000556454 DEKP35659 375 aaKnown RBP14.68□□□□□ -0.06
CLMN-207ENST00000556454 VPS8Q8N3P4 1428 aa14.67□□□□□ -0.06
CLMN-207ENST00000556454 UBTFP17480 764 aaKnown RBP14.66□□□□□ -0.06
CLMN-207ENST00000556454 ITGAEP38570 1179 aa14.65□□□□□ -0.06
CLMN-207ENST00000556454 RUSC2Q8N2Y8 1516 aa14.65□□□□□ -0.06
CLMN-207ENST00000556454 CLIP1P30622 1438 aa14.64□□□□□ -0.07
CLMN-207ENST00000556454 ANO8Q9HCE9 1232 aaPredicted RBP14.64□□□□□ -0.07
CLMN-207ENST00000556454 KIF21BO75037 1637 aa14.63□□□□□ -0.07
CLMN-207ENST00000556454 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
CLMN-207ENST00000556454 CUX2O14529 1486 aa14.59□□□□□ -0.07
CLMN-207ENST00000556454 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
CLMN-207ENST00000556454 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
CLMN-207ENST00000556454 CDK11AQ9UQ88 783 aaPredicted RBP14.55□□□□□ -0.08
CLMN-207ENST00000556454 CCER2I3L3R5 266 aa14.53□□□□□ -0.08
CLMN-207ENST00000556454 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
CLMN-207ENST00000556454 SMARCA2P51531 1590 aa14.53□□□□□ -0.08
CLMN-207ENST00000556454 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
CLMN-207ENST00000556454 SALL2Q9Y467 1007 aaPredicted RBP14.49□□□□□ -0.09
CLMN-207ENST00000556454 PPP1R15AO75807 674 aaPredicted RBP14.48□□□□□ -0.09
CLMN-207ENST00000556454 RRBP1Q9P2E9 1410 aaKnown RBP14.48□□□□□ -0.09
CLMN-207ENST00000556454 MAPKBP1O60336 1514 aa14.46□□□□□ -0.09
CLMN-207ENST00000556454 TRIM52Q96A61 297 aa14.46□□□□□ -0.1
CLMN-207ENST00000556454 DDX10Q13206 875 aaKnown RBP14.44□□□□□ -0.1
CLMN-207ENST00000556454 UBE2Q2Q8WVN8 375 aa14.44□□□□□ -0.1
CLMN-207ENST00000556454 WDR97A6NE52 1622 aa14.42□□□□□ -0.1
CLMN-207ENST00000556454 NOP58Q9Y2X3 529 aaKnown RBP14.41□□□□□ -0.1
CLMN-207ENST00000556454 ANP32CO43423 234 aa14.37□□□□□ -0.11
CLMN-207ENST00000556454 RAPGEF2Q9Y4G8 1499 aa14.36□□□□□ -0.11
CLMN-207ENST00000556454 PPP4R2Q9NY27 417 aa14.36□□□□□ -0.11
CLMN-207ENST00000556454 NBR1Q14596 966 aa14.34□□□□□ -0.11
CLMN-207ENST00000556454 PAK3O75914 559 aaPredicted RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms