RNA–Protein interactions for RNA: ENST00000556177.1

ESRRB-207, Transcript of estrogen related receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ESRRB, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRB-207ENST00000556177 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
ESRRB-207ENST00000556177 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
ESRRB-207ENST00000556177 ABCC9O60706 1549 aa30.03■■■□□ 2.4
ESRRB-207ENST00000556177 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
ESRRB-207ENST00000556177 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
ESRRB-207ENST00000556177 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
ESRRB-207ENST00000556177 NACADO15069 1562 aa29.13■■■□□ 2.25
ESRRB-207ENST00000556177 MYO15BQ96JP2 1530 aa29.08■■■□□ 2.25
ESRRB-207ENST00000556177 RB1CC1Q8TDY2 1594 aa29.04■■■□□ 2.24
ESRRB-207ENST00000556177 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
ESRRB-207ENST00000556177 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.14
ESRRB-207ENST00000556177 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
ESRRB-207ENST00000556177 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
ESRRB-207ENST00000556177 BICRAQ9NZM4 1560 aa28.06■■■□□ 2.08
ESRRB-207ENST00000556177 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
ESRRB-207ENST00000556177 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
ESRRB-207ENST00000556177 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
ESRRB-207ENST00000556177 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
ESRRB-207ENST00000556177 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
ESRRB-207ENST00000556177 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
ESRRB-207ENST00000556177 RSF1Q96T23 1441 aaPredicted RBP27.15■■□□□ 1.94
ESRRB-207ENST00000556177 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
ESRRB-207ENST00000556177 CC2D2AQ9P2K1 1620 aa27.09■■□□□ 1.93
ESRRB-207ENST00000556177 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
ESRRB-207ENST00000556177 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
ESRRB-207ENST00000556177 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
ESRRB-207ENST00000556177 WIZO95785 1651 aa26.9■■□□□ 1.9
ESRRB-207ENST00000556177 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
ESRRB-207ENST00000556177 BAZ1BQ9UIG0 1483 aaKnown RBP26.84■■□□□ 1.89
ESRRB-207ENST00000556177 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
ESRRB-207ENST00000556177 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
ESRRB-207ENST00000556177 CCDC88BA6NC98 1476 aa26.43■■□□□ 1.82
ESRRB-207ENST00000556177 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
ESRRB-207ENST00000556177 CFTRP13569 1480 aa26.12■■□□□ 1.77
ESRRB-207ENST00000556177 NESP48681 1621 aa26.11■■□□□ 1.77
ESRRB-207ENST00000556177 LAMC3Q9Y6N6 1575 aa26.06■■□□□ 1.76
ESRRB-207ENST00000556177 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
ESRRB-207ENST00000556177 ERCC6Q03468 1493 aa25.89■■□□□ 1.74
ESRRB-207ENST00000556177 FANCD2Q9BXW9 1451 aa25.89■■□□□ 1.73
ESRRB-207ENST00000556177 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
ESRRB-207ENST00000556177 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
ESRRB-207ENST00000556177 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
ESRRB-207ENST00000556177 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
ESRRB-207ENST00000556177 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.69
ESRRB-207ENST00000556177 ABCC8Q09428 1581 aa25.58■■□□□ 1.68
ESRRB-207ENST00000556177 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
ESRRB-207ENST00000556177 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
ESRRB-207ENST00000556177 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
ESRRB-207ENST00000556177 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
ESRRB-207ENST00000556177 CUX1P39880 1505 aa25.47■■□□□ 1.67
ESRRB-207ENST00000556177 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
ESRRB-207ENST00000556177 WDR62O43379 1518 aa25.45■■□□□ 1.66
ESRRB-207ENST00000556177 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
ESRRB-207ENST00000556177 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
ESRRB-207ENST00000556177 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
ESRRB-207ENST00000556177 SOGA1O94964 1423 aa25.35■■□□□ 1.65
ESRRB-207ENST00000556177 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
ESRRB-207ENST00000556177 CUX2O14529 1486 aa25.32■■□□□ 1.64
ESRRB-207ENST00000556177 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
ESRRB-207ENST00000556177 DNAJC5Q9H3Z4 198 aa25.3■■□□□ 1.64
ESRRB-207ENST00000556177 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
ESRRB-207ENST00000556177 RAD54L2Q9Y4B4 1467 aa25.25■■□□□ 1.63
ESRRB-207ENST00000556177 IFT140Q96RY7 1462 aa25.24■■□□□ 1.63
ESRRB-207ENST00000556177 TDRD9Q8NDG6 1382 aaKnown RBP25.15■■□□□ 1.62
ESRRB-207ENST00000556177 ABCA10Q8WWZ4 1543 aa25.1■■□□□ 1.61
ESRRB-207ENST00000556177 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
ESRRB-207ENST00000556177 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
ESRRB-207ENST00000556177 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
ESRRB-207ENST00000556177 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.63e-6■■■■■ 29.5
ESRRB-207ENST00000556177 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
ESRRB-207ENST00000556177 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
ESRRB-207ENST00000556177 RUSC2Q8N2Y8 1516 aa24.95■■□□□ 1.58
ESRRB-207ENST00000556177 CSRNP3Q8WYN3 585 aa24.94■■□□□ 1.58
ESRRB-207ENST00000556177 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
ESRRB-207ENST00000556177 GRIN2BQ13224 1484 aa24.91■■□□□ 1.58
ESRRB-207ENST00000556177 IGF1RP08069 1367 aa24.91■■□□□ 1.58
ESRRB-207ENST00000556177 EEA1Q15075 1411 aa24.91■■□□□ 1.58
ESRRB-207ENST00000556177 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
ESRRB-207ENST00000556177 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
ESRRB-207ENST00000556177 FBLN2P98095 1184 aa24.84■■□□□ 1.57
ESRRB-207ENST00000556177 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
ESRRB-207ENST00000556177 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
ESRRB-207ENST00000556177 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
ESRRB-207ENST00000556177 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
ESRRB-207ENST00000556177 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
ESRRB-207ENST00000556177 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
ESRRB-207ENST00000556177 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
ESRRB-207ENST00000556177 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
ESRRB-207ENST00000556177 SYNJ2O15056 1496 aa24.67■■□□□ 1.54
ESRRB-207ENST00000556177 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.54
ESRRB-207ENST00000556177 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
ESRRB-207ENST00000556177 CUL7Q14999 1698 aa24.63■■□□□ 1.53
ESRRB-207ENST00000556177 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
ESRRB-207ENST00000556177 ADAMTS12P58397 1594 aa24.6■■□□□ 1.53
ESRRB-207ENST00000556177 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
ESRRB-207ENST00000556177 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
ESRRB-207ENST00000556177 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
ESRRB-207ENST00000556177 GOLGA3Q08378 1498 aa24.49■■□□□ 1.51
ESRRB-207ENST00000556177 KIF21BO75037 1637 aa24.48■■□□□ 1.51
ESRRB-207ENST00000556177 CHD1O14646 1710 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms