RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, humanhuman

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-222ENST00000555907 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
RAD51B-222ENST00000555907 ABCC9O60706 1549 aa24.51■■□□□ 1.51
RAD51B-222ENST00000555907 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
RAD51B-222ENST00000555907 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
RAD51B-222ENST00000555907 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
RAD51B-222ENST00000555907 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
RAD51B-222ENST00000555907 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
RAD51B-222ENST00000555907 NACADO15069 1562 aa22.75■■□□□ 1.23
RAD51B-222ENST00000555907 UNC13AQ9UPW8 1703 aa22.63■■□□□ 1.21
RAD51B-222ENST00000555907 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
RAD51B-222ENST00000555907 MYO15BQ96JP2 1530 aa22.35■■□□□ 1.17
RAD51B-222ENST00000555907 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
RAD51B-222ENST00000555907 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
RAD51B-222ENST00000555907 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
RAD51B-222ENST00000555907 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
RAD51B-222ENST00000555907 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
RAD51B-222ENST00000555907 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.09
RAD51B-222ENST00000555907 SHROOM4Q9ULL8 1493 aa21.89■■□□□ 1.09
RAD51B-222ENST00000555907 DNAJC5Q9H3Z4 198 aa21.54■■□□□ 1.04
RAD51B-222ENST00000555907 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
RAD51B-222ENST00000555907 CUX2O14529 1486 aa21.12■□□□□ 0.97
RAD51B-222ENST00000555907 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
RAD51B-222ENST00000555907 NESP48681 1621 aa20.94■□□□□ 0.94
RAD51B-222ENST00000555907 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
RAD51B-222ENST00000555907 SMARCA4P51532 1647 aa20.89■□□□□ 0.94
RAD51B-222ENST00000555907 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
RAD51B-222ENST00000555907 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
RAD51B-222ENST00000555907 HMGXB3Q12766 1538 aa20.81■□□□□ 0.92
RAD51B-222ENST00000555907 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
RAD51B-222ENST00000555907 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
RAD51B-222ENST00000555907 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
RAD51B-222ENST00000555907 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
RAD51B-222ENST00000555907 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
RAD51B-222ENST00000555907 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
RAD51B-222ENST00000555907 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
RAD51B-222ENST00000555907 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
RAD51B-222ENST00000555907 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
RAD51B-222ENST00000555907 WIZO95785 1651 aa20.48■□□□□ 0.87
RAD51B-222ENST00000555907 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
RAD51B-222ENST00000555907 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
RAD51B-222ENST00000555907 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
RAD51B-222ENST00000555907 WDR62O43379 1518 aa20.32■□□□□ 0.84
RAD51B-222ENST00000555907 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
RAD51B-222ENST00000555907 FANCD2Q9BXW9 1451 aa20.2■□□□□ 0.82
RAD51B-222ENST00000555907 TOP2AP11388 1531 aaKnown RBP20.2■□□□□ 0.82
RAD51B-222ENST00000555907 SUPT5HO00267 1087 aaKnown RBP20.16■□□□□ 0.82
RAD51B-222ENST00000555907 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
RAD51B-222ENST00000555907 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
RAD51B-222ENST00000555907 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
RAD51B-222ENST00000555907 CFTRP13569 1480 aa20.05■□□□□ 0.8
RAD51B-222ENST00000555907 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
RAD51B-222ENST00000555907 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
RAD51B-222ENST00000555907 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
RAD51B-222ENST00000555907 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
RAD51B-222ENST00000555907 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
RAD51B-222ENST00000555907 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
RAD51B-222ENST00000555907 ARHGEF11O15085 1522 aa19.85■□□□□ 0.77
RAD51B-222ENST00000555907 IFT140Q96RY7 1462 aa19.82■□□□□ 0.76
RAD51B-222ENST00000555907 CYB5RLQ6IPT4 315 aa19.79■□□□□ 0.76
RAD51B-222ENST00000555907 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
RAD51B-222ENST00000555907 TOPBP1Q92547 1522 aa19.77■□□□□ 0.76
RAD51B-222ENST00000555907 CHD1O14646 1710 aa19.76■□□□□ 0.75
RAD51B-222ENST00000555907 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
RAD51B-222ENST00000555907 FBLN2P98095 1184 aa19.73■□□□□ 0.75
RAD51B-222ENST00000555907 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.74
RAD51B-222ENST00000555907 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
RAD51B-222ENST00000555907 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
RAD51B-222ENST00000555907 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
RAD51B-222ENST00000555907 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
RAD51B-222ENST00000555907 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
RAD51B-222ENST00000555907 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
RAD51B-222ENST00000555907 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
RAD51B-222ENST00000555907 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
RAD51B-222ENST00000555907 SOGA1O94964 1423 aa19.46■□□□□ 0.71
RAD51B-222ENST00000555907 CUX1P39880 1505 aa19.42■□□□□ 0.7
RAD51B-222ENST00000555907 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
RAD51B-222ENST00000555907 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
RAD51B-222ENST00000555907 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
RAD51B-222ENST00000555907 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
RAD51B-222ENST00000555907 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
RAD51B-222ENST00000555907 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
RAD51B-222ENST00000555907 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
RAD51B-222ENST00000555907 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
RAD51B-222ENST00000555907 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
RAD51B-222ENST00000555907 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
RAD51B-222ENST00000555907 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
RAD51B-222ENST00000555907 ABCA10Q8WWZ4 1543 aa19.18■□□□□ 0.66
RAD51B-222ENST00000555907 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
RAD51B-222ENST00000555907 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
RAD51B-222ENST00000555907 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
RAD51B-222ENST00000555907 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.66
RAD51B-222ENST00000555907 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
RAD51B-222ENST00000555907 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
RAD51B-222ENST00000555907 ADAMTS12P58397 1594 aa19.04■□□□□ 0.64
RAD51B-222ENST00000555907 KIF13AQ9H1H9 1805 aa18.99■□□□□ 0.63
RAD51B-222ENST00000555907 NUP160Q12769 1436 aa18.97■□□□□ 0.63
RAD51B-222ENST00000555907 SHROOM2Q13796 1616 aa18.95■□□□□ 0.62
RAD51B-222ENST00000555907 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
RAD51B-222ENST00000555907 FHAD1B1AJZ9 1412 aa18.92■□□□□ 0.62
RAD51B-222ENST00000555907 PRG4Q92954 1404 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms