RNA–Protein interactions for RNA: ENST00000555701.5

PAPOLA-216, Transcript of poly(A) polymerase alpha, humanhuman

TSL 2

Gene PAPOLA, Length 1,875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-216ENST00000555701 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
PAPOLA-216ENST00000555701 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
PAPOLA-216ENST00000555701 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
PAPOLA-216ENST00000555701 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
PAPOLA-216ENST00000555701 ABCC9O60706 1549 aa19.09■□□□□ 0.65
PAPOLA-216ENST00000555701 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
PAPOLA-216ENST00000555701 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
PAPOLA-216ENST00000555701 NACADO15069 1562 aa18.42■□□□□ 0.54
PAPOLA-216ENST00000555701 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
PAPOLA-216ENST00000555701 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
PAPOLA-216ENST00000555701 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
PAPOLA-216ENST00000555701 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
PAPOLA-216ENST00000555701 SLC24A1O60721 1099 aa18.09■□□□□ 0.49
PAPOLA-216ENST00000555701 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
PAPOLA-216ENST00000555701 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
PAPOLA-216ENST00000555701 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
PAPOLA-216ENST00000555701 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
PAPOLA-216ENST00000555701 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
PAPOLA-216ENST00000555701 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
PAPOLA-216ENST00000555701 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
PAPOLA-216ENST00000555701 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
PAPOLA-216ENST00000555701 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
PAPOLA-216ENST00000555701 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.35
PAPOLA-216ENST00000555701 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
PAPOLA-216ENST00000555701 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
PAPOLA-216ENST00000555701 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
PAPOLA-216ENST00000555701 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
PAPOLA-216ENST00000555701 NCAPD3P42695 1498 aa17.02■□□□□ 0.32
PAPOLA-216ENST00000555701 SMARCA2P51531 1590 aa17.02■□□□□ 0.32
PAPOLA-216ENST00000555701 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
PAPOLA-216ENST00000555701 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
PAPOLA-216ENST00000555701 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
PAPOLA-216ENST00000555701 WIZO95785 1651 aa16.93■□□□□ 0.3
PAPOLA-216ENST00000555701 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
PAPOLA-216ENST00000555701 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
PAPOLA-216ENST00000555701 MYT1Q01538 1121 aa16.76■□□□□ 0.27
PAPOLA-216ENST00000555701 TOP2AP11388 1531 aaKnown RBP16.73■□□□□ 0.27
PAPOLA-216ENST00000555701 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
PAPOLA-216ENST00000555701 DAXXQ9UER7 740 aaPredicted RBP16.67■□□□□ 0.26
PAPOLA-216ENST00000555701 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
PAPOLA-216ENST00000555701 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
PAPOLA-216ENST00000555701 NESP48681 1621 aa16.58■□□□□ 0.24
PAPOLA-216ENST00000555701 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
PAPOLA-216ENST00000555701 KCNA4P22459 653 aa16.55■□□□□ 0.24
PAPOLA-216ENST00000555701 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
PAPOLA-216ENST00000555701 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
PAPOLA-216ENST00000555701 CFTRP13569 1480 aa16.47■□□□□ 0.23
PAPOLA-216ENST00000555701 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
PAPOLA-216ENST00000555701 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
PAPOLA-216ENST00000555701 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
PAPOLA-216ENST00000555701 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
PAPOLA-216ENST00000555701 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.21
PAPOLA-216ENST00000555701 PRDM2Q13029 1718 aa16.33■□□□□ 0.2
PAPOLA-216ENST00000555701 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
PAPOLA-216ENST00000555701 ADRA2BP18089 450 aa16.28■□□□□ 0.2
PAPOLA-216ENST00000555701 THOC2Q8NI27 1593 aaKnown RBP16.26■□□□□ 0.19
PAPOLA-216ENST00000555701 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
PAPOLA-216ENST00000555701 APLP2Q06481 763 aa16.21■□□□□ 0.19
PAPOLA-216ENST00000555701 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
PAPOLA-216ENST00000555701 CUX2O14529 1486 aa16.18■□□□□ 0.18
PAPOLA-216ENST00000555701 WDR62O43379 1518 aa16.17■□□□□ 0.18
PAPOLA-216ENST00000555701 URB2Q14146 1524 aaKnown RBP16.17■□□□□ 0.18
PAPOLA-216ENST00000555701 PRKCSHP14314 528 aaPredicted RBP16.15■□□□□ 0.18
PAPOLA-216ENST00000555701 ERICH6Q7L0X2 663 aa16.14■□□□□ 0.17
PAPOLA-216ENST00000555701 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
PAPOLA-216ENST00000555701 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
PAPOLA-216ENST00000555701 ABCC8Q09428 1581 aa16.08■□□□□ 0.17
PAPOLA-216ENST00000555701 DNMBPQ6XZF7 1577 aa16.07■□□□□ 0.16
PAPOLA-216ENST00000555701 CUX1P39880 1505 aa16.03■□□□□ 0.16
PAPOLA-216ENST00000555701 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
PAPOLA-216ENST00000555701 POLA1P09884 1462 aaPredicted RBP15.98■□□□□ 0.15
PAPOLA-216ENST00000555701 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
PAPOLA-216ENST00000555701 RTN4Q9NQC3 1192 aaKnown RBP15.95■□□□□ 0.14
PAPOLA-216ENST00000555701 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
PAPOLA-216ENST00000555701 IFT140Q96RY7 1462 aa15.94■□□□□ 0.14
PAPOLA-216ENST00000555701 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
PAPOLA-216ENST00000555701 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
PAPOLA-216ENST00000555701 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
PAPOLA-216ENST00000555701 TARBP1Q13395 1621 aaKnown RBP15.92■□□□□ 0.14
PAPOLA-216ENST00000555701 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
PAPOLA-216ENST00000555701 SOGA1O94964 1423 aa15.91■□□□□ 0.14
PAPOLA-216ENST00000555701 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
PAPOLA-216ENST00000555701 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.12
PAPOLA-216ENST00000555701 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
PAPOLA-216ENST00000555701 PPP6R1Q9UPN7 881 aa15.81■□□□□ 0.12
PAPOLA-216ENST00000555701 ABCA10Q8WWZ4 1543 aa15.81■□□□□ 0.12
PAPOLA-216ENST00000555701 EIF4G3O43432 1585 aaKnown RBP15.8■□□□□ 0.12
PAPOLA-216ENST00000555701 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
PAPOLA-216ENST00000555701 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
PAPOLA-216ENST00000555701 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
PAPOLA-216ENST00000555701 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
PAPOLA-216ENST00000555701 GRIN2BQ13224 1484 aa15.69■□□□□ 0.1
PAPOLA-216ENST00000555701 PBRM1Q86U86 1689 aa15.66■□□□□ 0.1
PAPOLA-216ENST00000555701 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
PAPOLA-216ENST00000555701 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
PAPOLA-216ENST00000555701 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
PAPOLA-216ENST00000555701 AMER1Q5JTC6 1135 aaPredicted RBP15.63■□□□□ 0.09
PAPOLA-216ENST00000555701 FBLN2P98095 1184 aa15.61■□□□□ 0.09
PAPOLA-216ENST00000555701 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
PAPOLA-216ENST00000555701 ARXQ96QS3 562 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms