RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
APEX1-210ENST00000555414 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
APEX1-210ENST00000555414 ABCC9O60706 1549 aa22.67■■□□□ 1.22
APEX1-210ENST00000555414 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
APEX1-210ENST00000555414 DCAF8L2P0C7V8 631 aa22.42■■□□□ 1.18
APEX1-210ENST00000555414 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
APEX1-210ENST00000555414 MYO15BQ96JP2 1530 aa22.22■■□□□ 1.15
APEX1-210ENST00000555414 NACADO15069 1562 aa22.18■■□□□ 1.14
APEX1-210ENST00000555414 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
APEX1-210ENST00000555414 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
APEX1-210ENST00000555414 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
APEX1-210ENST00000555414 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
APEX1-210ENST00000555414 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
APEX1-210ENST00000555414 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
APEX1-210ENST00000555414 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
APEX1-210ENST00000555414 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
APEX1-210ENST00000555414 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
APEX1-210ENST00000555414 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
APEX1-210ENST00000555414 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
APEX1-210ENST00000555414 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
APEX1-210ENST00000555414 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
APEX1-210ENST00000555414 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
APEX1-210ENST00000555414 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
APEX1-210ENST00000555414 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
APEX1-210ENST00000555414 WIZO95785 1651 aa20.51■□□□□ 0.87
APEX1-210ENST00000555414 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
APEX1-210ENST00000555414 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
APEX1-210ENST00000555414 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
APEX1-210ENST00000555414 TOP2AP11388 1531 aaKnown RBP20.38■□□□□ 0.85
APEX1-210ENST00000555414 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
APEX1-210ENST00000555414 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
APEX1-210ENST00000555414 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
APEX1-210ENST00000555414 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
APEX1-210ENST00000555414 CFTRP13569 1480 aa19.88■□□□□ 0.77
APEX1-210ENST00000555414 LAMC3Q9Y6N6 1575 aa19.82■□□□□ 0.76
APEX1-210ENST00000555414 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
APEX1-210ENST00000555414 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
APEX1-210ENST00000555414 NESP48681 1621 aa19.73■□□□□ 0.75
APEX1-210ENST00000555414 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
APEX1-210ENST00000555414 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
APEX1-210ENST00000555414 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
APEX1-210ENST00000555414 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
APEX1-210ENST00000555414 TRIM41Q8WV44 630 aa19.59■□□□□ 0.73
APEX1-210ENST00000555414 ERCC6Q03468 1493 aa19.57■□□□□ 0.72
APEX1-210ENST00000555414 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.725e-6■■■■■ 29.2
APEX1-210ENST00000555414 ABCC8Q09428 1581 aa19.52■□□□□ 0.72
APEX1-210ENST00000555414 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
APEX1-210ENST00000555414 MRC2Q9UBG0 1479 aa19.44■□□□□ 0.7
APEX1-210ENST00000555414 CUX1P39880 1505 aa19.41■□□□□ 0.7
APEX1-210ENST00000555414 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
APEX1-210ENST00000555414 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
APEX1-210ENST00000555414 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
APEX1-210ENST00000555414 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
APEX1-210ENST00000555414 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
APEX1-210ENST00000555414 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
APEX1-210ENST00000555414 WDR62O43379 1518 aa19.31■□□□□ 0.68
APEX1-210ENST00000555414 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
APEX1-210ENST00000555414 THOC2Q8NI27 1593 aaKnown RBP19.28■□□□□ 0.68
APEX1-210ENST00000555414 SOGA1O94964 1423 aa19.25■□□□□ 0.67
APEX1-210ENST00000555414 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
APEX1-210ENST00000555414 EEA1Q15075 1411 aa19.17■□□□□ 0.66
APEX1-210ENST00000555414 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
APEX1-210ENST00000555414 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
APEX1-210ENST00000555414 KIF27Q86VH2 1401 aa19.16■□□□□ 0.66
APEX1-210ENST00000555414 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
APEX1-210ENST00000555414 CUX2O14529 1486 aa19.14■□□□□ 0.65
APEX1-210ENST00000555414 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
APEX1-210ENST00000555414 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
APEX1-210ENST00000555414 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
APEX1-210ENST00000555414 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
APEX1-210ENST00000555414 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
APEX1-210ENST00000555414 RUSC2Q8N2Y8 1516 aa19.02■□□□□ 0.64
APEX1-210ENST00000555414 GAPVD1Q14C86 1478 aa19.02■□□□□ 0.64
APEX1-210ENST00000555414 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.633e-9■■■□□ 17.9
APEX1-210ENST00000555414 IGF1RP08069 1367 aa18.97■□□□□ 0.63
APEX1-210ENST00000555414 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
APEX1-210ENST00000555414 ABCA5Q8WWZ7 1642 aa18.96■□□□□ 0.63
APEX1-210ENST00000555414 GRIN2BQ13224 1484 aa18.95■□□□□ 0.62
APEX1-210ENST00000555414 ERICH3Q5RHP9 1530 aa18.94■□□□□ 0.62
APEX1-210ENST00000555414 EIF4G3O43432 1585 aaKnown RBP18.9■□□□□ 0.62
APEX1-210ENST00000555414 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
APEX1-210ENST00000555414 CUL7Q14999 1698 aa18.86■□□□□ 0.61
APEX1-210ENST00000555414 PRXQ9BXM0 1461 aa18.86■□□□□ 0.61
APEX1-210ENST00000555414 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
APEX1-210ENST00000555414 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
APEX1-210ENST00000555414 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.61
APEX1-210ENST00000555414 RAPGEF2Q9Y4G8 1499 aa18.83■□□□□ 0.61
APEX1-210ENST00000555414 KIF21BO75037 1637 aa18.83■□□□□ 0.6
APEX1-210ENST00000555414 GOLGA3Q08378 1498 aa18.83■□□□□ 0.6
APEX1-210ENST00000555414 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
APEX1-210ENST00000555414 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
APEX1-210ENST00000555414 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
APEX1-210ENST00000555414 EHMT2Q96KQ7 1210 aa18.8■□□□□ 0.6
APEX1-210ENST00000555414 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
APEX1-210ENST00000555414 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
APEX1-210ENST00000555414 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
APEX1-210ENST00000555414 FBLN2P98095 1184 aa18.74■□□□□ 0.59
APEX1-210ENST00000555414 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
APEX1-210ENST00000555414 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
APEX1-210ENST00000555414 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms