RNA–Protein interactions for RNA: ENST00000555371.1

NFKBIA-204, Transcript of NFKB inhibitor alpha, humanhuman

TSL 3

Gene NFKBIA, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-204ENST00000555371 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
NFKBIA-204ENST00000555371 ABCC9O60706 1549 aa26.38■■□□□ 1.81
NFKBIA-204ENST00000555371 DNAJC5BQ9UF47 199 aa25.61■■□□□ 1.69
NFKBIA-204ENST00000555371 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
NFKBIA-204ENST00000555371 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
NFKBIA-204ENST00000555371 PABPN1Q86U42 306 aaKnown RBP eCLIP24.35■■□□□ 1.49
NFKBIA-204ENST00000555371 DNAJC5Q9H3Z4 198 aa24.25■■□□□ 1.47
NFKBIA-204ENST00000555371 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
NFKBIA-204ENST00000555371 NACADO15069 1562 aa24.08■■□□□ 1.44
NFKBIA-204ENST00000555371 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
NFKBIA-204ENST00000555371 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
NFKBIA-204ENST00000555371 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
NFKBIA-204ENST00000555371 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
NFKBIA-204ENST00000555371 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
NFKBIA-204ENST00000555371 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
NFKBIA-204ENST00000555371 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
NFKBIA-204ENST00000555371 CUX2O14529 1486 aa23.09■■□□□ 1.29
NFKBIA-204ENST00000555371 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
NFKBIA-204ENST00000555371 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
NFKBIA-204ENST00000555371 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
NFKBIA-204ENST00000555371 ZCCHC6Q5VYS8 1495 aaKnown RBP22.64■■□□□ 1.21
NFKBIA-204ENST00000555371 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
NFKBIA-204ENST00000555371 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
NFKBIA-204ENST00000555371 NESP48681 1621 aa22.35■■□□□ 1.17
NFKBIA-204ENST00000555371 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
NFKBIA-204ENST00000555371 NCAPD3P42695 1498 aa22.18■■□□□ 1.14
NFKBIA-204ENST00000555371 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
NFKBIA-204ENST00000555371 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
NFKBIA-204ENST00000555371 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
NFKBIA-204ENST00000555371 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
NFKBIA-204ENST00000555371 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.1
NFKBIA-204ENST00000555371 SMARCA4P51532 1647 aa21.81■■□□□ 1.08
NFKBIA-204ENST00000555371 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
NFKBIA-204ENST00000555371 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
NFKBIA-204ENST00000555371 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
NFKBIA-204ENST00000555371 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
NFKBIA-204ENST00000555371 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
NFKBIA-204ENST00000555371 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
NFKBIA-204ENST00000555371 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
NFKBIA-204ENST00000555371 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
NFKBIA-204ENST00000555371 WDR62O43379 1518 aa21.74■■□□□ 1.07
NFKBIA-204ENST00000555371 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
NFKBIA-204ENST00000555371 ARHGEF11O15085 1522 aa21.58■■□□□ 1.04
NFKBIA-204ENST00000555371 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
NFKBIA-204ENST00000555371 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
NFKBIA-204ENST00000555371 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
NFKBIA-204ENST00000555371 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
NFKBIA-204ENST00000555371 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
NFKBIA-204ENST00000555371 ARAP1Q96P48 1450 aa21.3■■□□□ 1
NFKBIA-204ENST00000555371 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
NFKBIA-204ENST00000555371 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
NFKBIA-204ENST00000555371 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
NFKBIA-204ENST00000555371 CHD1O14646 1710 aa21.15■□□□□ 0.98
NFKBIA-204ENST00000555371 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
NFKBIA-204ENST00000555371 WIZO95785 1651 aa21.04■□□□□ 0.96
NFKBIA-204ENST00000555371 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
NFKBIA-204ENST00000555371 CFTRP13569 1480 aa21.02■□□□□ 0.96
NFKBIA-204ENST00000555371 ILDR1Q86SU0 546 aaPredicted RBP21.01■□□□□ 0.95
NFKBIA-204ENST00000555371 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
NFKBIA-204ENST00000555371 FBLN2P98095 1184 aa20.92■□□□□ 0.94
NFKBIA-204ENST00000555371 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
NFKBIA-204ENST00000555371 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.927e-7■■■■■ 29.4
NFKBIA-204ENST00000555371 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
NFKBIA-204ENST00000555371 CLASP1Q7Z460 1538 aa20.76■□□□□ 0.91
NFKBIA-204ENST00000555371 TARBP1Q13395 1621 aaKnown RBP20.71■□□□□ 0.91
NFKBIA-204ENST00000555371 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
NFKBIA-204ENST00000555371 DNMBPQ6XZF7 1577 aa20.64■□□□□ 0.9
NFKBIA-204ENST00000555371 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
NFKBIA-204ENST00000555371 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
NFKBIA-204ENST00000555371 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
NFKBIA-204ENST00000555371 ABCC8Q09428 1581 aa20.58■□□□□ 0.88
NFKBIA-204ENST00000555371 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
NFKBIA-204ENST00000555371 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
NFKBIA-204ENST00000555371 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
NFKBIA-204ENST00000555371 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
NFKBIA-204ENST00000555371 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
NFKBIA-204ENST00000555371 KDM4FA0A1W2PPD8 638 aa20.47■□□□□ 0.87
NFKBIA-204ENST00000555371 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
NFKBIA-204ENST00000555371 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
NFKBIA-204ENST00000555371 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
NFKBIA-204ENST00000555371 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
NFKBIA-204ENST00000555371 SOGA1O94964 1423 aa20.36■□□□□ 0.85
NFKBIA-204ENST00000555371 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
NFKBIA-204ENST00000555371 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
NFKBIA-204ENST00000555371 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
NFKBIA-204ENST00000555371 KDM6BO15054 1643 aa20.31■□□□□ 0.84
NFKBIA-204ENST00000555371 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
NFKBIA-204ENST00000555371 HECW2Q9P2P5 1572 aa20.25■□□□□ 0.83
NFKBIA-204ENST00000555371 CEP170Q5SW79 1584 aa20.24■□□□□ 0.83
NFKBIA-204ENST00000555371 TSPOAP1O95153 1857 aa20.2■□□□□ 0.82
NFKBIA-204ENST00000555371 FAM69CQ0P6D2 419 aa20.2■□□□□ 0.82
NFKBIA-204ENST00000555371 DIP2BQ9P265 1576 aa20.17■□□□□ 0.82
NFKBIA-204ENST00000555371 ABCC10Q5T3U5 1492 aa20.16■□□□□ 0.82
NFKBIA-204ENST00000555371 ADGRL1O94910 1474 aa20.14■□□□□ 0.81
NFKBIA-204ENST00000555371 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
NFKBIA-204ENST00000555371 GRIN2AQ12879 1464 aa20.09■□□□□ 0.81
NFKBIA-204ENST00000555371 CUX1P39880 1505 aa20.07■□□□□ 0.8
NFKBIA-204ENST00000555371 FBXO41Q8TF61 875 aa20.07■□□□□ 0.8
NFKBIA-204ENST00000555371 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
NFKBIA-204ENST00000555371 MAPKBP1O60336 1514 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms