RNA–Protein interactions for RNA: ENST00000555371.1

NFKBIA-204, Transcript of NFKB inhibitor alpha, humanhuman

TSL 3

Gene NFKBIA, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-204ENST00000555371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.17□□□□□ -0.623e-23■■■■■ 559
NFKBIA-204ENST00000555371 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.49□□□□□ -0.892e-63■■■■■ 470.3
NFKBIA-204ENST00000555371 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.61□□□□□ -0.879e-26■■■■■ 78.5
NFKBIA-204ENST00000555371 PABPC4Q13310 644 aaKnown RBP eCLIP13.31□□□□□ -0.284e-16■■■■■ 41.2
NFKBIA-204ENST00000555371 SF3A3Q12874 501 aaKnown RBP eCLIP9.51□□□□□ -0.896e-8■■■■■ 36.7
NFKBIA-204ENST00000555371 SF3B4Q15427 424 aaKnown RBP eCLIP9.52□□□□□ -0.891e-9■■■■■ 35.8
NFKBIA-204ENST00000555371 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.03□□□□□ -0.83e-11■■■■■ 30
NFKBIA-204ENST00000555371 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.927e-7■■■■■ 29.4
NFKBIA-204ENST00000555371 U2AF2P26368 475 aaKnown RBP eCLIP11.69□□□□□ -0.541e-41■■■■□ 23.7
NFKBIA-204ENST00000555371 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.89□□□□□ -0.832e-8■■■■□ 23.1
NFKBIA-204ENST00000555371 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.182e-9■■■■□ 20.8
NFKBIA-204ENST00000555371 GPKOWQ92917 476 aaPredicted RBP eCLIP12.21□□□□□ -0.455e-7■■■□□ 17.4
NFKBIA-204ENST00000555371 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.31□□□□□ -0.281e-7■■■□□ 16.2
NFKBIA-204ENST00000555371 DDX6P26196 483 aaKnown RBP eCLIP11.35□□□□□ -0.593e-6■■□□□ 14.4
NFKBIA-204ENST00000555371 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.73□□□□□ -0.219e-8■■□□□ 13.2
NFKBIA-204ENST00000555371 RPS3P23396 243 aaKnown RBP eCLIP10.14□□□□□ -0.796e-12■■□□□ 12.5
NFKBIA-204ENST00000555371 RBM22Q9NW64 420 aaKnown RBP eCLIP10.51□□□□□ -0.738e-6■□□□□ 10.3
NFKBIA-204ENST00000555371 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.211e-7■□□□□ 9.3
NFKBIA-204ENST00000555371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.327e-8■□□□□ 8.3
Retrieved 19 of 19 RNA–protein pairs in 5.3 ms