RNA–Protein interactions for RNA: ENST00000555355.5

SDR39U1-211, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-211ENST00000555355 NISCHQ9Y2I1 1504 aa35.46■■■■□ 3.27
SDR39U1-211ENST00000555355 CCDC180Q9P1Z9 1646 aa31.73■■■□□ 2.67
SDR39U1-211ENST00000555355 ABCC9O60706 1549 aa31.14■■■□□ 2.57
SDR39U1-211ENST00000555355 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
SDR39U1-211ENST00000555355 NACADO15069 1562 aa29.86■■■□□ 2.37
SDR39U1-211ENST00000555355 MYO15BQ96JP2 1530 aa29.67■■■□□ 2.34
SDR39U1-211ENST00000555355 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.31
SDR39U1-211ENST00000555355 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
SDR39U1-211ENST00000555355 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
SDR39U1-211ENST00000555355 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
SDR39U1-211ENST00000555355 BICRAQ9NZM4 1560 aa29.04■■■□□ 2.24
SDR39U1-211ENST00000555355 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.232e-8■□□□□ 11.2
SDR39U1-211ENST00000555355 SHROOM4Q9ULL8 1493 aa28.84■■■□□ 2.21
SDR39U1-211ENST00000555355 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
SDR39U1-211ENST00000555355 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
SDR39U1-211ENST00000555355 EIF4G1Q04637 1599 aaKnown RBP28.29■■■□□ 2.12
SDR39U1-211ENST00000555355 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
SDR39U1-211ENST00000555355 CECR2Q9BXF3 1484 aa28.06■■■□□ 2.08
SDR39U1-211ENST00000555355 SMARCA4P51532 1647 aa27.58■■■□□ 2.01
SDR39U1-211ENST00000555355 NCAPD3P42695 1498 aa27.54■■■□□ 2
SDR39U1-211ENST00000555355 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
SDR39U1-211ENST00000555355 ATAD2BQ9ULI0 1458 aa27.48■■□□□ 1.99
SDR39U1-211ENST00000555355 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
SDR39U1-211ENST00000555355 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
SDR39U1-211ENST00000555355 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.97
SDR39U1-211ENST00000555355 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
SDR39U1-211ENST00000555355 BAZ1BQ9UIG0 1483 aaKnown RBP27.23■■□□□ 1.95
SDR39U1-211ENST00000555355 WIZO95785 1651 aa26.96■■□□□ 1.91
SDR39U1-211ENST00000555355 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
SDR39U1-211ENST00000555355 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
SDR39U1-211ENST00000555355 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
SDR39U1-211ENST00000555355 NESP48681 1621 aa26.87■■□□□ 1.89
SDR39U1-211ENST00000555355 CUX2O14529 1486 aa26.79■■□□□ 1.88
SDR39U1-211ENST00000555355 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
SDR39U1-211ENST00000555355 CADPSQ9ULU8 1353 aa26.68■■□□□ 1.86
SDR39U1-211ENST00000555355 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
SDR39U1-211ENST00000555355 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
SDR39U1-211ENST00000555355 KIF21AQ7Z4S6 1674 aa26.6■■□□□ 1.85
SDR39U1-211ENST00000555355 CFTRP13569 1480 aa26.49■■□□□ 1.83
SDR39U1-211ENST00000555355 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
SDR39U1-211ENST00000555355 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
SDR39U1-211ENST00000555355 WDR62O43379 1518 aa26.37■■□□□ 1.81
SDR39U1-211ENST00000555355 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
SDR39U1-211ENST00000555355 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
SDR39U1-211ENST00000555355 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
SDR39U1-211ENST00000555355 DNAJC5Q9H3Z4 198 aa26.2■■□□□ 1.78
SDR39U1-211ENST00000555355 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
SDR39U1-211ENST00000555355 ABCC8Q09428 1581 aa25.96■■□□□ 1.75
SDR39U1-211ENST00000555355 TOPBP1Q92547 1522 aa25.93■■□□□ 1.74
SDR39U1-211ENST00000555355 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
SDR39U1-211ENST00000555355 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
SDR39U1-211ENST00000555355 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
SDR39U1-211ENST00000555355 ZNF608Q9ULD9 1512 aaPredicted RBP25.7■■□□□ 1.7
SDR39U1-211ENST00000555355 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.7
SDR39U1-211ENST00000555355 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
SDR39U1-211ENST00000555355 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
SDR39U1-211ENST00000555355 CUX1P39880 1505 aa25.62■■□□□ 1.69
SDR39U1-211ENST00000555355 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
SDR39U1-211ENST00000555355 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
SDR39U1-211ENST00000555355 SOGA1O94964 1423 aa25.54■■□□□ 1.68
SDR39U1-211ENST00000555355 OSCARQ8IYS5 282 aa25.52■■□□□ 1.68
SDR39U1-211ENST00000555355 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
SDR39U1-211ENST00000555355 AQRO60306 1485 aaKnown RBP eCLIP25.49■■□□□ 1.67
SDR39U1-211ENST00000555355 TDRD9Q8NDG6 1382 aaKnown RBP25.39■■□□□ 1.65
SDR39U1-211ENST00000555355 BIVM-ERCC5R4GMW8 1640 aa25.38■■□□□ 1.65
SDR39U1-211ENST00000555355 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
SDR39U1-211ENST00000555355 CHD1O14646 1710 aa25.35■■□□□ 1.65
SDR39U1-211ENST00000555355 ABCA10Q8WWZ4 1543 aa25.35■■□□□ 1.65
SDR39U1-211ENST00000555355 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
SDR39U1-211ENST00000555355 GRIN2BQ13224 1484 aa25.32■■□□□ 1.64
SDR39U1-211ENST00000555355 MAGI1Q96QZ7 1491 aaPredicted RBP25.31■■□□□ 1.64
SDR39U1-211ENST00000555355 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
SDR39U1-211ENST00000555355 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
SDR39U1-211ENST00000555355 SNAPC4Q5SXM2 1469 aa25.29■■□□□ 1.64
SDR39U1-211ENST00000555355 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
SDR39U1-211ENST00000555355 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
SDR39U1-211ENST00000555355 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
SDR39U1-211ENST00000555355 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
SDR39U1-211ENST00000555355 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
SDR39U1-211ENST00000555355 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
SDR39U1-211ENST00000555355 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
SDR39U1-211ENST00000555355 FBLN2P98095 1184 aa25.15■■□□□ 1.62
SDR39U1-211ENST00000555355 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
SDR39U1-211ENST00000555355 CHMP7Q8WUX9 453 aaPredicted RBP25.11■■□□□ 1.61
SDR39U1-211ENST00000555355 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
SDR39U1-211ENST00000555355 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
SDR39U1-211ENST00000555355 ADAMTS12P58397 1594 aa25.06■■□□□ 1.6
SDR39U1-211ENST00000555355 GRIN2AQ12879 1464 aa25■■□□□ 1.59
SDR39U1-211ENST00000555355 FHAD1B1AJZ9 1412 aa24.98■■□□□ 1.59
SDR39U1-211ENST00000555355 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
SDR39U1-211ENST00000555355 NUP160Q12769 1436 aa24.92■■□□□ 1.58
SDR39U1-211ENST00000555355 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
SDR39U1-211ENST00000555355 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
SDR39U1-211ENST00000555355 CYB5RLQ6IPT4 315 aa24.83■■□□□ 1.57
SDR39U1-211ENST00000555355 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
SDR39U1-211ENST00000555355 CUL7Q14999 1698 aa24.78■■□□□ 1.56
SDR39U1-211ENST00000555355 IGF1RP08069 1367 aa24.75■■□□□ 1.55
SDR39U1-211ENST00000555355 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
SDR39U1-211ENST00000555355 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
SDR39U1-211ENST00000555355 KIAA0586Q9BVV6 1533 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms