RNA–Protein interactions for RNA: ENST00000555076.1

RNF34-208, Transcript of ring finger protein 34, humanhuman

TSL 3 BASIC

Gene RNF34, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34-208ENST00000555076 NISCHQ9Y2I1 1504 aa41.28■■■■■ 4.2
RNF34-208ENST00000555076 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
RNF34-208ENST00000555076 ABCC9O60706 1549 aa36.8■■■■□ 3.48
RNF34-208ENST00000555076 RB1CC1Q8TDY2 1594 aa35.16■■■■□ 3.22
RNF34-208ENST00000555076 NACADO15069 1562 aa34.98■■■■□ 3.19
RNF34-208ENST00000555076 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
RNF34-208ENST00000555076 DCAF8L2P0C7V8 631 aa34.59■■■■□ 3.13
RNF34-208ENST00000555076 DNAJC5BQ9UF47 199 aa34.43■■■■□ 3.1
RNF34-208ENST00000555076 UNC13AQ9UPW8 1703 aa34.32■■■■□ 3.08
RNF34-208ENST00000555076 ZCCHC6Q5VYS8 1495 aaKnown RBP34.27■■■■□ 3.08
RNF34-208ENST00000555076 PABPN1Q86U42 306 aaKnown RBP eCLIP34.24■■■■□ 3.07
RNF34-208ENST00000555076 DCAF1Q9Y4B6 1507 aa34.2■■■■□ 3.06
RNF34-208ENST00000555076 BICRAQ9NZM4 1560 aa34.14■■■■□ 3.06
RNF34-208ENST00000555076 SHROOM4Q9ULL8 1493 aa33.8■■■■□ 3
RNF34-208ENST00000555076 SCRIBQ14160 1630 aa33.64■■■□□ 2.98
RNF34-208ENST00000555076 CC2D2AQ9P2K1 1620 aa33.29■■■□□ 2.92
RNF34-208ENST00000555076 EIF4G1Q04637 1599 aaKnown RBP33.28■■■□□ 2.92
RNF34-208ENST00000555076 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
RNF34-208ENST00000555076 NCAPD3P42695 1498 aa32.3■■■□□ 2.76
RNF34-208ENST00000555076 ATAD2BQ9ULI0 1458 aa32.18■■■□□ 2.74
RNF34-208ENST00000555076 SMARCA4P51532 1647 aa32.17■■■□□ 2.74
RNF34-208ENST00000555076 SMARCA2P51531 1590 aa32.11■■■□□ 2.73
RNF34-208ENST00000555076 HMGXB3Q12766 1538 aa32.08■■■□□ 2.73
RNF34-208ENST00000555076 BAZ1AQ9NRL2 1556 aaPredicted RBP32.04■■■□□ 2.72
RNF34-208ENST00000555076 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
RNF34-208ENST00000555076 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
RNF34-208ENST00000555076 CUX2O14529 1486 aa31.78■■■□□ 2.68
RNF34-208ENST00000555076 ERCC6Q03468 1493 aa31.78■■■□□ 2.68
RNF34-208ENST00000555076 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
RNF34-208ENST00000555076 NESP48681 1621 aa31.65■■■□□ 2.66
RNF34-208ENST00000555076 DNAJC5Q9H3Z4 198 aa31.57■■■□□ 2.64
RNF34-208ENST00000555076 LAMC3Q9Y6N6 1575 aa31.53■■■□□ 2.64
RNF34-208ENST00000555076 THOC2Q8NI27 1593 aaKnown RBP31.38■■■□□ 2.61
RNF34-208ENST00000555076 WIZO95785 1651 aa31.37■■■□□ 2.61
RNF34-208ENST00000555076 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
RNF34-208ENST00000555076 CADPSQ9ULU8 1353 aa31.28■■■□□ 2.6
RNF34-208ENST00000555076 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
RNF34-208ENST00000555076 RSF1Q96T23 1441 aaPredicted RBP31.18■■■□□ 2.58
RNF34-208ENST00000555076 MRC2Q9UBG0 1479 aa31.05■■■□□ 2.56
RNF34-208ENST00000555076 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
RNF34-208ENST00000555076 WDR62O43379 1518 aa30.99■■■□□ 2.55
RNF34-208ENST00000555076 CFTRP13569 1480 aa30.98■■■□□ 2.55
RNF34-208ENST00000555076 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
RNF34-208ENST00000555076 FANCD2Q9BXW9 1451 aa30.91■■■□□ 2.54
RNF34-208ENST00000555076 CCDC88BA6NC98 1476 aa30.66■■■□□ 2.5
RNF34-208ENST00000555076 URB2Q14146 1524 aaKnown RBP30.66■■■□□ 2.5
RNF34-208ENST00000555076 PRDM2Q13029 1718 aa30.64■■■□□ 2.5
RNF34-208ENST00000555076 TOPBP1Q92547 1522 aa30.35■■■□□ 2.45
RNF34-208ENST00000555076 IFT140Q96RY7 1462 aa30.33■■■□□ 2.45
RNF34-208ENST00000555076 ABCC8Q09428 1581 aa30.32■■■□□ 2.45
RNF34-208ENST00000555076 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
RNF34-208ENST00000555076 DNMBPQ6XZF7 1577 aa30.25■■■□□ 2.43
RNF34-208ENST00000555076 ZNF608Q9ULD9 1512 aaPredicted RBP30.23■■■□□ 2.43
RNF34-208ENST00000555076 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
RNF34-208ENST00000555076 EIF4G3O43432 1585 aaKnown RBP30.09■■■□□ 2.41
RNF34-208ENST00000555076 TARBP1Q13395 1621 aaKnown RBP30.08■■■□□ 2.41
RNF34-208ENST00000555076 POLA1P09884 1462 aaPredicted RBP30.05■■■□□ 2.4
RNF34-208ENST00000555076 AQRO60306 1485 aaKnown RBP eCLIP29.95■■■□□ 2.39
RNF34-208ENST00000555076 SOGA1O94964 1423 aa29.88■■■□□ 2.37
RNF34-208ENST00000555076 RAD54L2Q9Y4B4 1467 aa29.88■■■□□ 2.37
RNF34-208ENST00000555076 RIMBP3CA6NJZ7 1639 aa29.86■■■□□ 2.37
RNF34-208ENST00000555076 RIMBP3BA6NNM3 1639 aa29.86■■■□□ 2.37
RNF34-208ENST00000555076 RIMBP3Q9UFD9 1639 aa29.86■■■□□ 2.37
RNF34-208ENST00000555076 FGD5Q6ZNL6 1462 aa29.86■■■□□ 2.37
RNF34-208ENST00000555076 CUX1P39880 1505 aa29.86■■■□□ 2.37
RNF34-208ENST00000555076 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
RNF34-208ENST00000555076 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
RNF34-208ENST00000555076 ARHGEF11O15085 1522 aa29.81■■■□□ 2.36
RNF34-208ENST00000555076 CHD1O14646 1710 aa29.8■■■□□ 2.36
RNF34-208ENST00000555076 TDRD9Q8NDG6 1382 aaKnown RBP29.78■■■□□ 2.36
RNF34-208ENST00000555076 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
RNF34-208ENST00000555076 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
RNF34-208ENST00000555076 FBLN2P98095 1184 aa29.65■■■□□ 2.34
RNF34-208ENST00000555076 GRIN2BQ13224 1484 aa29.64■■■□□ 2.34
RNF34-208ENST00000555076 ABCA10Q8WWZ4 1543 aa29.57■■■□□ 2.32
RNF34-208ENST00000555076 CLASP1Q7Z460 1538 aa29.55■■■□□ 2.32
RNF34-208ENST00000555076 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
RNF34-208ENST00000555076 GAPVD1Q14C86 1478 aa29.54■■■□□ 2.32
RNF34-208ENST00000555076 CHMP7Q8WUX9 453 aaPredicted RBP29.52■■■□□ 2.32
RNF34-208ENST00000555076 ARAP1Q96P48 1450 aa29.52■■■□□ 2.32
RNF34-208ENST00000555076 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.31
RNF34-208ENST00000555076 CYB5RLQ6IPT4 315 aa29.5■■■□□ 2.31
RNF34-208ENST00000555076 SYNJ1O43426 1573 aa29.5■■■□□ 2.31
RNF34-208ENST00000555076 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
RNF34-208ENST00000555076 WRNQ14191 1432 aaPredicted RBP eCLIP29.45■■■□□ 2.3
RNF34-208ENST00000555076 TOP2BQ02880 1626 aa29.43■■■□□ 2.3
RNF34-208ENST00000555076 BIVM-ERCC5R4GMW8 1640 aa29.43■■■□□ 2.3
RNF34-208ENST00000555076 GRIN2AQ12879 1464 aa29.26■■■□□ 2.27
RNF34-208ENST00000555076 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
RNF34-208ENST00000555076 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
RNF34-208ENST00000555076 NUP160Q12769 1436 aa29.2■■■□□ 2.26
RNF34-208ENST00000555076 FHAD1B1AJZ9 1412 aa29.19■■■□□ 2.26
RNF34-208ENST00000555076 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
RNF34-208ENST00000555076 TRHP20396 242 aaPredicted RBP29.08■■■□□ 2.25
RNF34-208ENST00000555076 SHROOM2Q13796 1616 aa29.05■■■□□ 2.24
RNF34-208ENST00000555076 ERCC6L2Q5T890 1561 aa29.02■■■□□ 2.24
RNF34-208ENST00000555076 RUSC2Q8N2Y8 1516 aa28.86■■■□□ 2.21
RNF34-208ENST00000555076 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
RNF34-208ENST00000555076 PRG4Q92954 1404 aaPredicted RBP28.84■■■□□ 2.21
RNF34-208ENST00000555076 IGF1RP08069 1367 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms